RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 IDEP14735 1019 aa15.41■□□□□ 0.06
CDK12-201ENST00000430627 SMC1AQ14683 1233 aaKnown RBP15.41■□□□□ 0.06
CDK12-201ENST00000430627 DDX23Q9BUQ8 820 aaKnown RBP15.41■□□□□ 0.06
CDK12-201ENST00000430627 FERP16591 822 aa15.41■□□□□ 0.06
CDK12-201ENST00000430627 GABPAQ06546 454 aa15.41■□□□□ 0.06
CDK12-201ENST00000430627 PTPDC1A2A3K4 754 aa15.4■□□□□ 0.06
CDK12-201ENST00000430627 FAM193BQ96PV7 902 aaPredicted RBP15.4■□□□□ 0.06
CDK12-201ENST00000430627 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
CDK12-201ENST00000430627 ZNF397Q8NF99 534 aaPredicted RBP15.4■□□□□ 0.06
CDK12-201ENST00000430627 PDRG1Q9NUG6 133 aa15.4■□□□□ 0.06
CDK12-201ENST00000430627 SAP30BPQ9UHR5 308 aaKnown RBP15.4■□□□□ 0.06
CDK12-201ENST00000430627 ABL1P00519 1130 aa15.4■□□□□ 0.06
CDK12-201ENST00000430627 TMEM106CQ9BVX2 250 aa15.4■□□□□ 0.06
CDK12-201ENST00000430627 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
CDK12-201ENST00000430627 MAP3K2Q9Y2U5 619 aa15.39■□□□□ 0.05
CDK12-201ENST00000430627 FAM177A1Q8N128 213 aaPredicted RBP15.39■□□□□ 0.05
CDK12-201ENST00000430627 HYPKQ9NX55 129 aa15.39■□□□□ 0.05
CDK12-201ENST00000430627 PDCP20941 246 aa15.39■□□□□ 0.05
CDK12-201ENST00000430627 GOPCQ9HD26 462 aa15.39■□□□□ 0.05
CDK12-201ENST00000430627 SKOR2Q2VWA4 1001 aaPredicted RBP15.39■□□□□ 0.05
CDK12-201ENST00000430627 HEATR3Q7Z4Q2 680 aa15.39■□□□□ 0.05
CDK12-201ENST00000430627 CCDC175P0C221 793 aa15.39■□□□□ 0.05
CDK12-201ENST00000430627 TTF1Q15361 905 aaPredicted RBP15.39■□□□□ 0.05
CDK12-201ENST00000430627 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 FAM193AP78312 1265 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 KLHL10Q6JEL2 608 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 FKBP15Q5T1M5 1219 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 NAA16Q6N069 864 aaPredicted RBP15.38■□□□□ 0.05
CDK12-201ENST00000430627 RAB3IL1Q8TBN0 382 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 IRAK4Q9NWZ3 460 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
CDK12-201ENST00000430627 ANKRD30BQ9BXX2 1392 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 NR1I2O75469 434 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
CDK12-201ENST00000430627 GJC1P36383 396 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 HSP90AA2PQ14568 343 aaPredicted RBP15.38■□□□□ 0.05
CDK12-201ENST00000430627 TEX35Q5T0J7 233 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 SH2D4AQ9H788 454 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 TRIM37O94972 964 aa15.38■□□□□ 0.05
CDK12-201ENST00000430627 ERCC4Q92889 916 aaPredicted RBP15.37■□□□□ 0.05
CDK12-201ENST00000430627 PLEKHH2Q8IVE3 1493 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 SPDYE3A6NKU9 549 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 SNRPA1P09661 255 aaKnown RBP15.37■□□□□ 0.05
CDK12-201ENST00000430627 TRAF1Q13077 416 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 CCDC40Q4G0X9 1142 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 PPP4R3BQ5MIZ7 849 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 VPS36Q86VN1 386 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 RAB11FIP4Q86YS3 637 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 KIF7Q2M1P5 1343 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 SLC39A6Q13433 755 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 ERMNQ8TAM6 284 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 CFAP58Q5T655 872 aa15.37■□□□□ 0.05
CDK12-201ENST00000430627 ARGLU1Q9NWB6 273 aaPredicted RBP15.37■□□□□ 0.05
CDK12-201ENST00000430627 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
CDK12-201ENST00000430627 CALRP27797 417 aaKnown RBP15.36■□□□□ 0.05
CDK12-201ENST00000430627 GOLIM4O00461 696 aa15.36■□□□□ 0.05
CDK12-201ENST00000430627 GLRX3O76003 335 aaKnown RBP15.36■□□□□ 0.05
CDK12-201ENST00000430627 RRP1P56182 461 aaKnown RBP15.36■□□□□ 0.05
CDK12-201ENST00000430627 MFSD6Q6ZSS7 791 aa15.36■□□□□ 0.05
CDK12-201ENST00000430627 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
CDK12-201ENST00000430627 RPGRIP1LQ68CZ1 1315 aa15.36■□□□□ 0.05
CDK12-201ENST00000430627 ACTN2P35609 894 aa15.36■□□□□ 0.05
CDK12-201ENST00000430627 UBE3BQ7Z3V4 1068 aa15.36■□□□□ 0.05
CDK12-201ENST00000430627 THUMPD2Q9BTF0 503 aaKnown RBP15.36■□□□□ 0.05
CDK12-201ENST00000430627 SORBS3O60504 671 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 SLC4A4Q9Y6R1 1079 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
CDK12-201ENST00000430627 GUCY1B3Q02153 619 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 C2CD5Q86YS7 1000 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 TSPYL1Q9H0U9 437 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 MRVI1Q9Y6F6 885 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 C6orf50Q9HD87 102 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 ADGRL1O94910 1474 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 TCP10Q12799 353 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 UBE4AQ14139 1066 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 LARP1BQ659C4 914 aaKnown RBP15.35■□□□□ 0.05
CDK12-201ENST00000430627 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
CDK12-201ENST00000430627 LDHBP07195 334 aaKnown RBP15.34■□□□□ 0.05
CDK12-201ENST00000430627 GOLGA1Q92805 767 aa15.34■□□□□ 0.05
CDK12-201ENST00000430627 HAND2P61296 217 aa15.34■□□□□ 0.05
CDK12-201ENST00000430627 H0YHG0 523 aa15.34■□□□□ 0.05
CDK12-201ENST00000430627 GGA1Q9UJY5 639 aa15.34■□□□□ 0.05
CDK12-201ENST00000430627 UHRF1BP1Q6BDS2 1440 aa15.34■□□□□ 0.05
CDK12-201ENST00000430627 TCP11L1Q9NUJ3 509 aa15.33■□□□□ 0.05
CDK12-201ENST00000430627 FNDC3AQ9Y2H6 1198 aaKnown RBP15.33■□□□□ 0.05
CDK12-201ENST00000430627 WASLO00401 505 aaPredicted RBP15.33■□□□□ 0.05
CDK12-201ENST00000430627 DLGAP5Q15398 846 aa15.33■□□□□ 0.05
CDK12-201ENST00000430627 TDRD12Q587J7 1177 aaKnown RBP15.33■□□□□ 0.05
CDK12-201ENST00000430627 SNX16P57768 344 aa15.33■□□□□ 0.04
CDK12-201ENST00000430627 TRPC5Q9UL62 973 aaPredicted RBP15.33■□□□□ 0.04
CDK12-201ENST00000430627 ZBED4O75132 1171 aa15.33■□□□□ 0.04
CDK12-201ENST00000430627 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
CDK12-201ENST00000430627 CPXCR1Q8N123 301 aa15.33■□□□□ 0.04
CDK12-201ENST00000430627 ARHGEF10LQ9HCE6 1279 aa15.33■□□□□ 0.04
CDK12-201ENST00000430627 FMNL1O95466 1100 aaPredicted RBP15.32■□□□□ 0.04
CDK12-201ENST00000430627 PRPF31Q8WWY3 499 aaKnown RBP15.32■□□□□ 0.04
CDK12-201ENST00000430627 TEX14Q8IWB6 1497 aa15.32■□□□□ 0.04
CDK12-201ENST00000430627 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.043e-6■■□□□ 14.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms