RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
SMC6-205ENST00000430591 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 RUNDC1Q96C34 613 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
SMC6-205ENST00000430591 USP42Q9H9J4 1324 aaKnown RBP8.73□□□□□ -1.01
SMC6-205ENST00000430591 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 KIF13BQ9NQT8 1826 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 ANXA1P04083 346 aa8.72□□□□□ -1.01
SMC6-205ENST00000430591 TAF7Q15545 349 aaPredicted RBP8.72□□□□□ -1.01
SMC6-205ENST00000430591 BBXQ8WY36 941 aaPredicted RBP8.72□□□□□ -1.01
SMC6-205ENST00000430591 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
SMC6-205ENST00000430591 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
SMC6-205ENST00000430591 TBC1D2BQ9UPU7 963 aa8.72□□□□□ -1.01
SMC6-205ENST00000430591 CARMIL3Q8ND23 1372 aa8.72□□□□□ -1.01
SMC6-205ENST00000430591 ANKRD31Q8N7Z5 1873 aa8.71□□□□□ -1.01
SMC6-205ENST00000430591 HTATSF1O43719 755 aaKnown RBP8.71□□□□□ -1.02
SMC6-205ENST00000430591 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.021e-6■■■■□ 21.3
SMC6-205ENST00000430591 POLD1P28340 1107 aa8.71□□□□□ -1.02
SMC6-205ENST00000430591 RFC4P35249 363 aa8.71□□□□□ -1.02
SMC6-205ENST00000430591 EIF4A1P60842 406 aaKnown RBP8.71□□□□□ -1.02
SMC6-205ENST00000430591 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
SMC6-205ENST00000430591 FLAD1Q8NFF5 587 aa8.71□□□□□ -1.02
SMC6-205ENST00000430591 PNISRQ8TF01 805 aaKnown RBP8.71□□□□□ -1.02
SMC6-205ENST00000430591 MRS2Q9HD23 443 aa8.71□□□□□ -1.02
SMC6-205ENST00000430591 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.02
SMC6-205ENST00000430591 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.02
SMC6-205ENST00000430591 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
SMC6-205ENST00000430591 PROSER3Q2NL68 480 aa8.7□□□□□ -1.02
SMC6-205ENST00000430591 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
SMC6-205ENST00000430591 NGEFQ8N5V2 710 aa8.7□□□□□ -1.02
SMC6-205ENST00000430591 ZNF428Q96B54 188 aa8.7□□□□□ -1.02
SMC6-205ENST00000430591 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
SMC6-205ENST00000430591 PXDNLA1KZ92 1463 aa8.7□□□□□ -1.02
SMC6-205ENST00000430591 COL11A2P13942 1736 aaPredicted RBP8.69□□□□□ -1.02
SMC6-205ENST00000430591 NRXN2Q9P2S2 1712 aa8.69□□□□□ -1.02
SMC6-205ENST00000430591 POLRMTO00411 1230 aaKnown RBP8.69□□□□□ -1.02
SMC6-205ENST00000430591 ANP32CO43423 234 aa8.69□□□□□ -1.02
SMC6-205ENST00000430591 GIGYF1O75420 1035 aaPredicted RBP8.69□□□□□ -1.02
SMC6-205ENST00000430591 NFIXQ14938 502 aa8.69□□□□□ -1.02
SMC6-205ENST00000430591 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
SMC6-205ENST00000430591 TBC1D9BQ66K14 1250 aa8.69□□□□□ -1.02
SMC6-205ENST00000430591 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
SMC6-205ENST00000430591 TSPYL4Q9UJ04 414 aa8.69□□□□□ -1.02
SMC6-205ENST00000430591 C10orf71Q711Q0 1435 aa8.69□□□□□ -1.02
SMC6-205ENST00000430591 NUP98P52948 1817 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 CACNA1SQ13698 1873 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 A0A0G2JLW4 131 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 CAMTA2O94983 1202 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 NEFMP07197 916 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
SMC6-205ENST00000430591 MYL6BP14649 208 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 TM4SF1P30408 202 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 CHRNA5P30532 468 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 TTLL7Q6ZT98 887 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 SLC51AQ86UW1 340 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 FAM9BQ8IZU0 186 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 NARFQ9UHQ1 456 aa8.68□□□□□ -1.02
SMC6-205ENST00000430591 CHL1O00533 1208 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 STARD3NLO95772 234 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 EIF2S2P20042 333 aaKnown RBP8.67□□□□□ -1.02
SMC6-205ENST00000430591 PDIA6Q15084 440 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 HLFQ16534 295 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 LRP10Q7Z4F1 713 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
SMC6-205ENST00000430591 SPNS2Q8IVW8 549 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 TSR2Q969E8 191 aaKnown RBP8.67□□□□□ -1.02
SMC6-205ENST00000430591 TNRC6CQ9HCJ0 1690 aaKnown RBP8.67□□□□□ -1.02
SMC6-205ENST00000430591 MBIPQ9NS73 344 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
SMC6-205ENST00000430591 FAM177BA6PVY3 158 aa8.66□□□□□ -1.02
SMC6-205ENST00000430591 ELL2O00472 640 aaPredicted RBP8.66□□□□□ -1.02
SMC6-205ENST00000430591 TCERG1O14776 1098 aaKnown RBP8.66□□□□□ -1.02
SMC6-205ENST00000430591 ZPR1O75312 459 aa8.66□□□□□ -1.02
SMC6-205ENST00000430591 ZNF853P0CG23 659 aa8.66□□□□□ -1.02
SMC6-205ENST00000430591 DPEP1P16444 411 aa8.66□□□□□ -1.02
SMC6-205ENST00000430591 KCNA3P22001 575 aa8.66□□□□□ -1.02
SMC6-205ENST00000430591 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
SMC6-205ENST00000430591 ZNF687Q8N1G0 1237 aa8.66□□□□□ -1.02
SMC6-205ENST00000430591 NLGN1Q8N2Q7 840 aa8.66□□□□□ -1.02
SMC6-205ENST00000430591 LARP6Q9BRS8 491 aaKnown RBP8.66□□□□□ -1.02
SMC6-205ENST00000430591 CHD4Q14839 1912 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 SERPINB2P05120 415 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 MFSD10Q14728 455 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 GPR162Q16538 588 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 TSPYL6Q8N831 410 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 C8orf58Q8NAV2 365 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 OXER1Q8TDS5 423 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.02
SMC6-205ENST00000430591 ZBTB3Q9H5J0 574 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 DLEC1Q9Y238 1755 aa8.65□□□□□ -1.02
SMC6-205ENST00000430591 PDE4AP27815 886 aa8.64□□□□□ -1.03
SMC6-205ENST00000430591 DDX27Q96GQ7 796 aaKnown RBP8.64□□□□□ -1.03
SMC6-205ENST00000430591 TEX13AQ9BXU3 409 aaPredicted RBP8.64□□□□□ -1.03
SMC6-205ENST00000430591 CD2APQ9Y5K6 639 aa8.64□□□□□ -1.03
SMC6-205ENST00000430591 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 ABCC12Q96J65 1359 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 COL4A1P02462 1669 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 GPTP24298 496 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms