RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PNISRQ8TF01 805 aaKnown RBP24.28■■□□□ 1.48
UPK3BP1-201ENST00000428678 GJA3Q9Y6H8 435 aa24.28■■□□□ 1.48
UPK3BP1-201ENST00000428678 KDM3BQ7LBC6 1761 aa24.28■■□□□ 1.48
UPK3BP1-201ENST00000428678 SNED1Q8TER0 1413 aa24.27■■□□□ 1.48
UPK3BP1-201ENST00000428678 EIF6P56537 245 aaKnown RBP24.27■■□□□ 1.48
UPK3BP1-201ENST00000428678 TTLL7Q6ZT98 887 aa24.27■■□□□ 1.48
UPK3BP1-201ENST00000428678 MYL6BP14649 208 aa24.26■■□□□ 1.47
UPK3BP1-201ENST00000428678 CC2D2BQ6DHV5 1058 aa24.26■■□□□ 1.47
UPK3BP1-201ENST00000428678 ZBTB3Q9H5J0 574 aa24.26■■□□□ 1.47
UPK3BP1-201ENST00000428678 DEFB115Q30KQ5 88 aa24.25■■□□□ 1.47
UPK3BP1-201ENST00000428678 COL4A5P29400 1685 aa24.24■■□□□ 1.47
UPK3BP1-201ENST00000428678 LMOD1P29536 600 aaPredicted RBP24.24■■□□□ 1.47
UPK3BP1-201ENST00000428678 EIF4A1P60842 406 aaKnown RBP24.24■■□□□ 1.47
UPK3BP1-201ENST00000428678 LARGE2Q8N3Y3 721 aa24.24■■□□□ 1.47
UPK3BP1-201ENST00000428678 WBP1LQ9NX94 342 aa24.24■■□□□ 1.47
UPK3BP1-201ENST00000428678 ABT1Q9ULW3 272 aaKnown RBP24.24■■□□□ 1.47
UPK3BP1-201ENST00000428678 UBN2Q6ZU65 1347 aa24.24■■□□□ 1.47
UPK3BP1-201ENST00000428678 RASSF10A6NK89 507 aa24.23■■□□□ 1.47
UPK3BP1-201ENST00000428678 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
UPK3BP1-201ENST00000428678 HOXA10P31260 410 aaPredicted RBP24.23■■□□□ 1.47
UPK3BP1-201ENST00000428678 THUMPD2Q9BTF0 503 aaKnown RBP24.23■■□□□ 1.47
UPK3BP1-201ENST00000428678 IBTKQ9P2D0 1353 aaPredicted RBP24.23■■□□□ 1.47
UPK3BP1-201ENST00000428678 RIC1Q4ADV7 1423 aa24.23■■□□□ 1.47
UPK3BP1-201ENST00000428678 LBX1P52954 281 aa24.22■■□□□ 1.47
UPK3BP1-201ENST00000428678 SUSD4Q5VX71 490 aa24.22■■□□□ 1.47
UPK3BP1-201ENST00000428678 RBM17Q96I25 401 aaKnown RBP24.22■■□□□ 1.47
UPK3BP1-201ENST00000428678 PPEF1O14829 653 aaPredicted RBP24.21■■□□□ 1.47
UPK3BP1-201ENST00000428678 GRIPAP1Q4V328 841 aa24.21■■□□□ 1.47
UPK3BP1-201ENST00000428678 SLC51AQ86UW1 340 aa24.21■■□□□ 1.47
UPK3BP1-201ENST00000428678 LTBP1Q14766 1721 aa24.21■■□□□ 1.47
UPK3BP1-201ENST00000428678 WDR33Q9C0J8 1336 aaKnown RBP24.2■■□□□ 1.46
UPK3BP1-201ENST00000428678 NFE2L2Q16236 605 aa24.2■■□□□ 1.46
UPK3BP1-201ENST00000428678 CRAMP1Q96RY5 1269 aa24.2■■□□□ 1.46
UPK3BP1-201ENST00000428678 DDX21Q9NR30 783 aaKnown RBP eCLIP24.2■■□□□ 1.46
UPK3BP1-201ENST00000428678 EPS15P42566 896 aa24.19■■□□□ 1.46
UPK3BP1-201ENST00000428678 NTSR2O95665 410 aa24.18■■□□□ 1.46
UPK3BP1-201ENST00000428678 SCNN1DP51172 638 aa24.18■■□□□ 1.46
UPK3BP1-201ENST00000428678 MAP2K1Q02750 393 aaPredicted RBP24.18■■□□□ 1.46
UPK3BP1-201ENST00000428678 GIGYF2Q6Y7W6 1299 aaKnown RBP24.18■■□□□ 1.46
UPK3BP1-201ENST00000428678 NIM1KQ8IY84 436 aa24.18■■□□□ 1.46
UPK3BP1-201ENST00000428678 ZNF34Q8IZ26 560 aa24.18■■□□□ 1.46
UPK3BP1-201ENST00000428678 C3orf67Q6ZVT6 689 aa24.17■■□□□ 1.46
UPK3BP1-201ENST00000428678 PAXIP1Q6ZW49 1069 aaPredicted RBP24.17■■□□□ 1.46
UPK3BP1-201ENST00000428678 PPP1R42Q7Z4L9 355 aa24.17■■□□□ 1.46
UPK3BP1-201ENST00000428678 PLEKHF1Q96S99 279 aa24.17■■□□□ 1.46
UPK3BP1-201ENST00000428678 TMX4Q9H1E5 349 aaPredicted RBP24.17■■□□□ 1.46
UPK3BP1-201ENST00000428678 PPIP5K2O43314 1243 aa24.16■■□□□ 1.46
UPK3BP1-201ENST00000428678 HSPA8P11142 646 aaKnown RBP24.16■■□□□ 1.46
UPK3BP1-201ENST00000428678 FMR1Q06787 632 aaKnown RBP eCLIP24.16■■□□□ 1.46
UPK3BP1-201ENST00000428678 ERBB4Q15303 1308 aa24.15■■□□□ 1.46
UPK3BP1-201ENST00000428678 MAPK8IP3Q9UPT6 1336 aa24.15■■□□□ 1.46
UPK3BP1-201ENST00000428678 PARP10Q53GL7 1025 aa24.15■■□□□ 1.46
UPK3BP1-201ENST00000428678 NLRP3Q96P20 1036 aa24.15■■□□□ 1.46
UPK3BP1-201ENST00000428678 GRM1Q13255 1194 aa24.14■■□□□ 1.45
UPK3BP1-201ENST00000428678 AOC3Q16853 763 aa24.14■■□□□ 1.45
UPK3BP1-201ENST00000428678 USP50Q70EL3 339 aaPredicted RBP24.14■■□□□ 1.45
UPK3BP1-201ENST00000428678 TRPM7Q96QT4 1865 aa24.14■■□□□ 1.45
UPK3BP1-201ENST00000428678 TSPYL4Q9UJ04 414 aa24.14■■□□□ 1.45
UPK3BP1-201ENST00000428678 CAPNS2Q96L46 248 aa24.13■■□□□ 1.45
UPK3BP1-201ENST00000428678 TRAF5O00463 557 aa24.12■■□□□ 1.45
UPK3BP1-201ENST00000428678 UTP14AQ9BVJ6 771 aaKnown RBP24.12■■□□□ 1.45
UPK3BP1-201ENST00000428678 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
UPK3BP1-201ENST00000428678 ATP6V0A2Q9Y487 856 aa24.12■■□□□ 1.45
UPK3BP1-201ENST00000428678 EIF2S2P20042 333 aaKnown RBP24.11■■□□□ 1.45
UPK3BP1-201ENST00000428678 ECE1P42892 770 aa24.11■■□□□ 1.45
UPK3BP1-201ENST00000428678 CYP4F22Q6NT55 531 aa24.1■■□□□ 1.45
UPK3BP1-201ENST00000428678 BEGAINQ9BUH8 593 aa24.1■■□□□ 1.45
UPK3BP1-201ENST00000428678 ADARB2Q9NS39 739 aaKnown RBP24.1■■□□□ 1.45
UPK3BP1-201ENST00000428678 GPRC5DQ9NZD1 345 aa24.1■■□□□ 1.45
UPK3BP1-201ENST00000428678 ABCC4O15439 1325 aa24.1■■□□□ 1.45
UPK3BP1-201ENST00000428678 ANXA1P04083 346 aa24.09■■□□□ 1.45
UPK3BP1-201ENST00000428678 PDIA6Q15084 440 aa24.09■■□□□ 1.45
UPK3BP1-201ENST00000428678 CST9Q5W186 159 aa24.09■■□□□ 1.45
UPK3BP1-201ENST00000428678 SUPT20HQ8NEM7 779 aa24.09■■□□□ 1.45
UPK3BP1-201ENST00000428678 VPS33BQ9H267 617 aa24.09■■□□□ 1.45
UPK3BP1-201ENST00000428678 ZNRF3Q9ULT6 936 aa24.09■■□□□ 1.45
UPK3BP1-201ENST00000428678 THSD7BQ9C0I4 1608 aa24.09■■□□□ 1.45
UPK3BP1-201ENST00000428678 PROSER3Q2NL68 480 aa24.08■■□□□ 1.45
UPK3BP1-201ENST00000428678 SLC10A5Q5PT55 438 aa24.08■■□□□ 1.45
UPK3BP1-201ENST00000428678 LRP10Q7Z4F1 713 aa24.08■■□□□ 1.45
UPK3BP1-201ENST00000428678 ABHD8Q96I13 439 aa24.08■■□□□ 1.45
UPK3BP1-201ENST00000428678 GPR101Q96P66 508 aaPredicted RBP24.08■■□□□ 1.45
UPK3BP1-201ENST00000428678 CXCL9Q07325 125 aa24.07■■□□□ 1.44
UPK3BP1-201ENST00000428678 DPP8Q6V1X1 898 aaPredicted RBP24.07■■□□□ 1.44
UPK3BP1-201ENST00000428678 TLL2Q9Y6L7 1015 aa24.07■■□□□ 1.44
UPK3BP1-201ENST00000428678 GMPSP49915 693 aaPredicted RBP24.06■■□□□ 1.44
UPK3BP1-201ENST00000428678 LAMB2P55268 1798 aa24.06■■□□□ 1.44
UPK3BP1-201ENST00000428678 HCLS1P14317 486 aaPredicted RBP24.05■■□□□ 1.44
UPK3BP1-201ENST00000428678 NECTIN2Q92692 538 aa24.05■■□□□ 1.44
UPK3BP1-201ENST00000428678 RTFDC1Q9BY42 306 aaPredicted RBP24.05■■□□□ 1.44
UPK3BP1-201ENST00000428678 ANKRD36CQ5JPF3 1778 aa24.05■■□□□ 1.44
UPK3BP1-201ENST00000428678 BBOX1O75936 387 aa24.04■■□□□ 1.44
UPK3BP1-201ENST00000428678 RIPK4P57078 832 aa24.04■■□□□ 1.44
UPK3BP1-201ENST00000428678 AIMP1Q12904 312 aaKnown RBP24.04■■□□□ 1.44
UPK3BP1-201ENST00000428678 MPNDQ8N594 471 aa24.04■■□□□ 1.44
UPK3BP1-201ENST00000428678 CELF2O95319 508 aaKnown RBP24.03■■□□□ 1.44
UPK3BP1-201ENST00000428678 HSP90AB3PQ58FF7 597 aa24.03■■□□□ 1.44
UPK3BP1-201ENST00000428678 CIAPIN1Q6FI81 312 aa24.03■■□□□ 1.44
UPK3BP1-201ENST00000428678 DDX46Q7L014 1031 aaKnown RBP24.03■■□□□ 1.44
UPK3BP1-201ENST00000428678 COPS6Q7L5N1 327 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms