RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PDIA6Q15084 440 aa22.85■■□□□ 1.25
DDR1-235ENST00000428153 SUSD4Q5VX71 490 aa22.85■■□□□ 1.25
DDR1-235ENST00000428153 SYNE4Q8N205 404 aa22.85■■□□□ 1.25
DDR1-235ENST00000428153 RPGRQ92834 1020 aaKnown RBP22.85■■□□□ 1.25
DDR1-235ENST00000428153 TAF1DQ9H5J8 278 aaPredicted RBP22.85■■□□□ 1.25
DDR1-235ENST00000428153 GPTP24298 496 aa22.84■■□□□ 1.25
DDR1-235ENST00000428153 OLFM4Q6UX06 510 aa22.83■■□□□ 1.25
DDR1-235ENST00000428153 JDP2Q8WYK2 163 aa22.83■■□□□ 1.25
DDR1-235ENST00000428153 RBM17Q96I25 401 aaKnown RBP22.83■■□□□ 1.25
DDR1-235ENST00000428153 HSP90AB3PQ58FF7 597 aa22.82■■□□□ 1.24
DDR1-235ENST00000428153 GPC2Q8N158 579 aa22.82■■□□□ 1.24
DDR1-235ENST00000428153 HACL1Q9UJ83 578 aa22.82■■□□□ 1.24
DDR1-235ENST00000428153 ZNF541Q9H0D2 1346 aa22.82■■□□□ 1.24
DDR1-235ENST00000428153 POTEIP0CG38 1075 aa22.81■■□□□ 1.24
DDR1-235ENST00000428153 POTEJP0CG39 1038 aa22.81■■□□□ 1.24
DDR1-235ENST00000428153 SLC10A5Q5PT55 438 aa22.81■■□□□ 1.24
DDR1-235ENST00000428153 NLRP3Q96P20 1036 aa22.81■■□□□ 1.24
DDR1-235ENST00000428153 PASKQ96RG2 1323 aa22.81■■□□□ 1.24
DDR1-235ENST00000428153 EIF2S2P20042 333 aaKnown RBP22.8■■□□□ 1.24
DDR1-235ENST00000428153 PNMA8AQ86V59 439 aaPredicted RBP22.8■■□□□ 1.24
DDR1-235ENST00000428153 CHL1O00533 1208 aa22.79■■□□□ 1.24
DDR1-235ENST00000428153 UTP14AQ9BVJ6 771 aaKnown RBP22.79■■□□□ 1.24
DDR1-235ENST00000428153 VPS33BQ9H267 617 aa22.79■■□□□ 1.24
DDR1-235ENST00000428153 ADAMTSL1Q8N6G6 1762 aa22.78■■□□□ 1.24
DDR1-235ENST00000428153 EPHX2P34913 555 aa22.78■■□□□ 1.24
DDR1-235ENST00000428153 RUNDC1Q96C34 613 aa22.78■■□□□ 1.24
DDR1-235ENST00000428153 PPEF1O14829 653 aaPredicted RBP22.77■■□□□ 1.24
DDR1-235ENST00000428153 HOXB7P09629 217 aa22.77■■□□□ 1.24
DDR1-235ENST00000428153 EIF6P56537 245 aaKnown RBP22.77■■□□□ 1.24
DDR1-235ENST00000428153 DDX21Q9NR30 783 aaKnown RBP eCLIP22.77■■□□□ 1.24
DDR1-235ENST00000428153 ANKRD36CQ5JPF3 1778 aa22.76■■□□□ 1.23
DDR1-235ENST00000428153 DDX10Q13206 875 aaKnown RBP22.76■■□□□ 1.23
DDR1-235ENST00000428153 PROSER3Q2NL68 480 aa22.76■■□□□ 1.23
DDR1-235ENST00000428153 TMX4Q9H1E5 349 aaPredicted RBP22.76■■□□□ 1.23
DDR1-235ENST00000428153 ITGBL1O95965 494 aaPredicted RBP22.75■■□□□ 1.23
DDR1-235ENST00000428153 WDR43Q15061 677 aaKnown RBP eCLIP22.75■■□□□ 1.23
DDR1-235ENST00000428153 COPS6Q7L5N1 327 aa22.75■■□□□ 1.23
DDR1-235ENST00000428153 HSPA1AP0DMV8 641 aaKnown RBP22.74■■□□□ 1.23
DDR1-235ENST00000428153 HSPA1BP0DMV9 641 aaKnown RBP22.74■■□□□ 1.23
DDR1-235ENST00000428153 COL13A1Q5TAT6 717 aaPredicted RBP22.74■■□□□ 1.23
DDR1-235ENST00000428153 NLRP10Q86W26 655 aa22.74■■□□□ 1.23
DDR1-235ENST00000428153 LARGE2Q8N3Y3 721 aa22.74■■□□□ 1.23
DDR1-235ENST00000428153 TRIM35Q9UPQ4 493 aa22.74■■□□□ 1.23
DDR1-235ENST00000428153 ATP6V0A2Q9Y487 856 aa22.74■■□□□ 1.23
DDR1-235ENST00000428153 TCIRG1Q13488 830 aa22.73■■□□□ 1.23
DDR1-235ENST00000428153 EAPPQ56P03 285 aaPredicted RBP22.73■■□□□ 1.23
DDR1-235ENST00000428153 C3orf67Q6ZVT6 689 aa22.73■■□□□ 1.23
DDR1-235ENST00000428153 XAGE3Q8WTP9 111 aa22.73■■□□□ 1.23
DDR1-235ENST00000428153 CNTNAP1P78357 1384 aa22.73■■□□□ 1.23
DDR1-235ENST00000428153 COL4A5P29400 1685 aa22.72■■□□□ 1.23
DDR1-235ENST00000428153 TMEM88BA6NKF7 163 aa22.72■■□□□ 1.23
DDR1-235ENST00000428153 BBOX1O75936 387 aa22.72■■□□□ 1.23
DDR1-235ENST00000428153 ANXA1P04083 346 aa22.72■■□□□ 1.23
DDR1-235ENST00000428153 SUPT20HQ8NEM7 779 aa22.72■■□□□ 1.23
DDR1-235ENST00000428153 RTFDC1Q9BY42 306 aaPredicted RBP22.72■■□□□ 1.23
DDR1-235ENST00000428153 LMOD1P29536 600 aaPredicted RBP22.71■■□□□ 1.23
DDR1-235ENST00000428153 NEUROD2Q15784 382 aa22.71■■□□□ 1.23
DDR1-235ENST00000428153 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
DDR1-235ENST00000428153 CLEC11AQ9Y240 323 aa22.71■■□□□ 1.23
DDR1-235ENST00000428153 ABCC4O15439 1325 aa22.71■■□□□ 1.23
DDR1-235ENST00000428153 AIMP1Q12904 312 aaKnown RBP22.7■■□□□ 1.22
DDR1-235ENST00000428153 NIM1KQ8IY84 436 aa22.7■■□□□ 1.22
DDR1-235ENST00000428153 CFAP44Q96MT7 982 aa22.7■■□□□ 1.22
DDR1-235ENST00000428153 MKRN1Q9UHC7 482 aaKnown RBP22.7■■□□□ 1.22
DDR1-235ENST00000428153 ADAMTS8Q9UP79 889 aa22.7■■□□□ 1.22
DDR1-235ENST00000428153 SH3TC1Q8TE82 1336 aa22.7■■□□□ 1.22
DDR1-235ENST00000428153 TMC4Q7Z404 712 aa22.69■■□□□ 1.22
DDR1-235ENST00000428153 SP8Q8IXZ3 490 aa22.69■■□□□ 1.22
DDR1-235ENST00000428153 CNTROBQ8N137 903 aa22.69■■□□□ 1.22
DDR1-235ENST00000428153 PLBD2Q8NHP8 589 aa22.69■■□□□ 1.22
DDR1-235ENST00000428153 DBF4Q9UBU7 674 aaPredicted RBP22.69■■□□□ 1.22
DDR1-235ENST00000428153 PPIP5K2O43314 1243 aa22.68■■□□□ 1.22
DDR1-235ENST00000428153 SCNN1DP51172 638 aa22.68■■□□□ 1.22
DDR1-235ENST00000428153 HDGFL1Q5TGJ6 251 aa22.68■■□□□ 1.22
DDR1-235ENST00000428153 NECTIN2Q92692 538 aa22.68■■□□□ 1.22
DDR1-235ENST00000428153 CHPF2Q9P2E5 772 aa22.68■■□□□ 1.22
DDR1-235ENST00000428153 TRMT112Q9UI30 125 aaKnown RBP22.68■■□□□ 1.22
DDR1-235ENST00000428153 GJA3Q9Y6H8 435 aa22.68■■□□□ 1.22
DDR1-235ENST00000428153 USP50Q70EL3 339 aaPredicted RBP22.67■■□□□ 1.22
DDR1-235ENST00000428153 DDX46Q7L014 1031 aaKnown RBP22.67■■□□□ 1.22
DDR1-235ENST00000428153 LAMB2P55268 1798 aa22.67■■□□□ 1.22
DDR1-235ENST00000428153 GRAPQ13588 217 aa22.66■■□□□ 1.22
DDR1-235ENST00000428153 KRT24Q2M2I5 525 aa22.66■■□□□ 1.22
DDR1-235ENST00000428153 ANKRD13DQ6ZTN6 518 aa22.66■■□□□ 1.22
DDR1-235ENST00000428153 TNS4Q8IZW8 715 aa22.66■■□□□ 1.22
DDR1-235ENST00000428153 GRAPLQ8TC17 118 aaPredicted RBP22.66■■□□□ 1.22
DDR1-235ENST00000428153 PRKRIP1Q9H875 184 aaPredicted RBP22.66■■□□□ 1.22
DDR1-235ENST00000428153 HYPKQ9NX55 129 aa22.66■■□□□ 1.22
DDR1-235ENST00000428153 LAS1LQ9Y4W2 734 aaKnown RBP22.66■■□□□ 1.22
DDR1-235ENST00000428153 LTBP1Q14766 1721 aa22.65■■□□□ 1.22
DDR1-235ENST00000428153 CDHR2Q9BYE9 1310 aa22.65■■□□□ 1.22
DDR1-235ENST00000428153 TCERG1O14776 1098 aaKnown RBP22.65■■□□□ 1.22
DDR1-235ENST00000428153 HCLS1P14317 486 aaPredicted RBP22.65■■□□□ 1.22
DDR1-235ENST00000428153 DPP8Q6V1X1 898 aaPredicted RBP22.65■■□□□ 1.22
DDR1-235ENST00000428153 MPNDQ8N594 471 aa22.65■■□□□ 1.22
DDR1-235ENST00000428153 ISCA1Q9BUE6 129 aa22.65■■□□□ 1.22
DDR1-235ENST00000428153 ZNRF3Q9ULT6 936 aa22.65■■□□□ 1.22
DDR1-235ENST00000428153 RASSF10A6NK89 507 aa22.64■■□□□ 1.21
DDR1-235ENST00000428153 KIAA2012Q0VF49 1180 aa22.64■■□□□ 1.21
DDR1-235ENST00000428153 TRIM28Q13263 835 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms