RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
NELFE-203ENST00000426722 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
NELFE-203ENST00000426722 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
NELFE-203ENST00000426722 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 PASKQ96RG2 1323 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
NELFE-203ENST00000426722 GPC2Q8N158 579 aa16.93■□□□□ 0.3
NELFE-203ENST00000426722 ZNF541Q9H0D2 1346 aa16.93■□□□□ 0.3
NELFE-203ENST00000426722 NTSR2O95665 410 aa16.92■□□□□ 0.3
NELFE-203ENST00000426722 GPTP24298 496 aa16.92■□□□□ 0.3
NELFE-203ENST00000426722 EPHX2P34913 555 aa16.92■□□□□ 0.3
NELFE-203ENST00000426722 EIF6P56537 245 aaKnown RBP16.92■□□□□ 0.3
NELFE-203ENST00000426722 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
NELFE-203ENST00000426722 RNF123Q5XPI4 1314 aa16.92■□□□□ 0.3
NELFE-203ENST00000426722 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
NELFE-203ENST00000426722 SLC10A5Q5PT55 438 aa16.91■□□□□ 0.3
NELFE-203ENST00000426722 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
NELFE-203ENST00000426722 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
NELFE-203ENST00000426722 ADAMTSL1Q8N6G6 1762 aa16.91■□□□□ 0.3
NELFE-203ENST00000426722 ITGBL1O95965 494 aaPredicted RBP16.9■□□□□ 0.3
NELFE-203ENST00000426722 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
NELFE-203ENST00000426722 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
NELFE-203ENST00000426722 PDIA6Q15084 440 aa16.9■□□□□ 0.3
NELFE-203ENST00000426722 EAPPQ56P03 285 aaPredicted RBP16.9■□□□□ 0.3
NELFE-203ENST00000426722 LRP10Q7Z4F1 713 aa16.9■□□□□ 0.3
NELFE-203ENST00000426722 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
NELFE-203ENST00000426722 CNTNAP1P78357 1384 aa16.89■□□□□ 0.3
NELFE-203ENST00000426722 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.3
NELFE-203ENST00000426722 TMEM88BA6NKF7 163 aa16.89■□□□□ 0.29
NELFE-203ENST00000426722 PPEF1O14829 653 aaPredicted RBP16.89■□□□□ 0.29
NELFE-203ENST00000426722 TNS4Q8IZW8 715 aa16.89■□□□□ 0.29
NELFE-203ENST00000426722 UTP14AQ9BVJ6 771 aaKnown RBP16.89■□□□□ 0.29
NELFE-203ENST00000426722 MKRN1Q9UHC7 482 aaKnown RBP16.89■□□□□ 0.29
NELFE-203ENST00000426722 LMOD1P29536 600 aaPredicted RBP16.87■□□□□ 0.29
NELFE-203ENST00000426722 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
NELFE-203ENST00000426722 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
NELFE-203ENST00000426722 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
NELFE-203ENST00000426722 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
NELFE-203ENST00000426722 ATP6V0A2Q9Y487 856 aa16.86■□□□□ 0.29
NELFE-203ENST00000426722 BBOX1O75936 387 aa16.85■□□□□ 0.29
NELFE-203ENST00000426722 COPS6Q7L5N1 327 aa16.85■□□□□ 0.29
NELFE-203ENST00000426722 NIM1KQ8IY84 436 aa16.85■□□□□ 0.29
NELFE-203ENST00000426722 DDX21Q9NR30 783 aaKnown RBP eCLIP16.85■□□□□ 0.29
NELFE-203ENST00000426722 GJA3Q9Y6H8 435 aa16.85■□□□□ 0.29
NELFE-203ENST00000426722 CHL1O00533 1208 aa16.84■□□□□ 0.29
NELFE-203ENST00000426722 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
NELFE-203ENST00000426722 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
NELFE-203ENST00000426722 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
NELFE-203ENST00000426722 USP50Q70EL3 339 aaPredicted RBP16.84■□□□□ 0.29
NELFE-203ENST00000426722 SP8Q8IXZ3 490 aa16.84■□□□□ 0.29
NELFE-203ENST00000426722 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
NELFE-203ENST00000426722 LAMB2P55268 1798 aa16.84■□□□□ 0.29
NELFE-203ENST00000426722 PPIP5K2O43314 1243 aa16.83■□□□□ 0.28
NELFE-203ENST00000426722 ANXA1P04083 346 aa16.83■□□□□ 0.28
NELFE-203ENST00000426722 HOXB7P09629 217 aa16.83■□□□□ 0.28
NELFE-203ENST00000426722 COL4A5P29400 1685 aa16.83■□□□□ 0.28
NELFE-203ENST00000426722 NLRP10Q86W26 655 aa16.83■□□□□ 0.28
NELFE-203ENST00000426722 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
NELFE-203ENST00000426722 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
NELFE-203ENST00000426722 ABCC4O15439 1325 aa16.82■□□□□ 0.28
NELFE-203ENST00000426722 RASSF10A6NK89 507 aa16.82■□□□□ 0.28
NELFE-203ENST00000426722 TCERG1O14776 1098 aaKnown RBP16.82■□□□□ 0.28
NELFE-203ENST00000426722 SCNN1DP51172 638 aa16.82■□□□□ 0.28
NELFE-203ENST00000426722 AIMP1Q12904 312 aaKnown RBP16.82■□□□□ 0.28
NELFE-203ENST00000426722 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
NELFE-203ENST00000426722 DEFB115Q30KQ5 88 aa16.82■□□□□ 0.28
NELFE-203ENST00000426722 MAP1SQ66K74 1059 aaPredicted RBP16.82■□□□□ 0.28
NELFE-203ENST00000426722 TMC4Q7Z404 712 aa16.82■□□□□ 0.28
NELFE-203ENST00000426722 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
NELFE-203ENST00000426722 SH3TC1Q8TE82 1336 aa16.81■□□□□ 0.28
NELFE-203ENST00000426722 VEGFBP49765 207 aa16.81■□□□□ 0.28
NELFE-203ENST00000426722 NEUROD2Q15784 382 aa16.81■□□□□ 0.28
NELFE-203ENST00000426722 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
NELFE-203ENST00000426722 PRDM10Q9NQV6 1147 aa16.81■□□□□ 0.28
NELFE-203ENST00000426722 TRMT112Q9UI30 125 aaKnown RBP16.81■□□□□ 0.28
NELFE-203ENST00000426722 TRPM7Q96QT4 1865 aa16.81■□□□□ 0.28
NELFE-203ENST00000426722 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
NELFE-203ENST00000426722 GRAPQ13588 217 aa16.8■□□□□ 0.28
NELFE-203ENST00000426722 DPP8Q6V1X1 898 aaPredicted RBP16.8■□□□□ 0.28
NELFE-203ENST00000426722 MPNDQ8N594 471 aa16.8■□□□□ 0.28
NELFE-203ENST00000426722 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
NELFE-203ENST00000426722 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
NELFE-203ENST00000426722 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
NELFE-203ENST00000426722 ZNRF3Q9ULT6 936 aa16.8■□□□□ 0.28
NELFE-203ENST00000426722 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
NELFE-203ENST00000426722 EPS15P42566 896 aa16.79■□□□□ 0.28
NELFE-203ENST00000426722 CTCFP49711 727 aaPredicted RBP16.79■□□□□ 0.28
NELFE-203ENST00000426722 AOC3Q16853 763 aa16.79■□□□□ 0.28
NELFE-203ENST00000426722 CCDC146Q8IYE0 955 aa16.79■□□□□ 0.28
NELFE-203ENST00000426722 PLBD2Q8NHP8 589 aa16.79■□□□□ 0.28
NELFE-203ENST00000426722 ADARB2Q9NS39 739 aaKnown RBP16.79■□□□□ 0.28
NELFE-203ENST00000426722 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
NELFE-203ENST00000426722 CDHR2Q9BYE9 1310 aa16.78■□□□□ 0.28
NELFE-203ENST00000426722 FOXN1O15353 648 aa16.78■□□□□ 0.28
NELFE-203ENST00000426722 HCLS1P14317 486 aaPredicted RBP16.78■□□□□ 0.28
NELFE-203ENST00000426722 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
NELFE-203ENST00000426722 HDGFL1Q5TGJ6 251 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms