RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 CAPN15O75808 1086 aa26.17■■□□□ 1.78
CCDC107-206ENST00000426546 CREBZFQ9NS37 354 aa26.17■■□□□ 1.78
CCDC107-206ENST00000426546 PROSER3Q2NL68 480 aa26.16■■□□□ 1.78
CCDC107-206ENST00000426546 PARP10Q53GL7 1025 aa26.16■■□□□ 1.78
CCDC107-206ENST00000426546 SUSD4Q5VX71 490 aa26.15■■□□□ 1.78
CCDC107-206ENST00000426546 NTSR2O95665 410 aa26.14■■□□□ 1.78
CCDC107-206ENST00000426546 FKBP4Q02790 459 aaKnown RBP eCLIP26.14■■□□□ 1.78
CCDC107-206ENST00000426546 PPP1R42Q7Z4L9 355 aa26.14■■□□□ 1.78
CCDC107-206ENST00000426546 RTKN2Q8IZC4 609 aa26.14■■□□□ 1.78
CCDC107-206ENST00000426546 L3MBTL3Q96JM7 780 aaPredicted RBP26.14■■□□□ 1.78
CCDC107-206ENST00000426546 LAS1LQ9Y4W2 734 aaKnown RBP26.14■■□□□ 1.78
CCDC107-206ENST00000426546 ANXA1P04083 346 aa26.13■■□□□ 1.77
CCDC107-206ENST00000426546 DDX21Q9NR30 783 aaKnown RBP eCLIP26.13■■□□□ 1.77
CCDC107-206ENST00000426546 SCN4AP35499 1836 aa26.13■■□□□ 1.77
CCDC107-206ENST00000426546 IQCA1LA6NCM1 817 aa26.12■■□□□ 1.77
CCDC107-206ENST00000426546 HOXB7P09629 217 aa26.12■■□□□ 1.77
CCDC107-206ENST00000426546 KRT24Q2M2I5 525 aa26.12■■□□□ 1.77
CCDC107-206ENST00000426546 MKRN1Q9UHC7 482 aaKnown RBP26.12■■□□□ 1.77
CCDC107-206ENST00000426546 HOXA10P31260 410 aaPredicted RBP26.11■■□□□ 1.77
CCDC107-206ENST00000426546 NECTIN2Q92692 538 aa26.11■■□□□ 1.77
CCDC107-206ENST00000426546 RPGRQ92834 1020 aaKnown RBP26.11■■□□□ 1.77
CCDC107-206ENST00000426546 CFAP44Q96MT7 982 aa26.11■■□□□ 1.77
CCDC107-206ENST00000426546 TAF1DQ9H5J8 278 aaPredicted RBP26.11■■□□□ 1.77
CCDC107-206ENST00000426546 RNF123Q5XPI4 1314 aa26.11■■□□□ 1.77
CCDC107-206ENST00000426546 OLFM4Q6UX06 510 aa26.1■■□□□ 1.77
CCDC107-206ENST00000426546 COPS6Q7L5N1 327 aa26.1■■□□□ 1.77
CCDC107-206ENST00000426546 LDHDQ86WU2 507 aa26.1■■□□□ 1.77
CCDC107-206ENST00000426546 XAGE3Q8WTP9 111 aa26.1■■□□□ 1.77
CCDC107-206ENST00000426546 SNED1Q8TER0 1413 aa26.1■■□□□ 1.77
CCDC107-206ENST00000426546 PASKQ96RG2 1323 aa26.1■■□□□ 1.77
CCDC107-206ENST00000426546 HSP90AB3PQ58FF7 597 aa26.09■■□□□ 1.77
CCDC107-206ENST00000426546 ZNF277Q9NRM2 450 aaPredicted RBP26.09■■□□□ 1.77
CCDC107-206ENST00000426546 ZNF541Q9H0D2 1346 aa26.09■■□□□ 1.77
CCDC107-206ENST00000426546 CC2D2BQ6DHV5 1058 aa26.08■■□□□ 1.77
CCDC107-206ENST00000426546 UTP14AQ9BVJ6 771 aaKnown RBP26.08■■□□□ 1.77
CCDC107-206ENST00000426546 AIMP1Q12904 312 aaKnown RBP26.07■■□□□ 1.76
CCDC107-206ENST00000426546 HDGFL1Q5TGJ6 251 aa26.07■■□□□ 1.76
CCDC107-206ENST00000426546 RBM17Q96I25 401 aaKnown RBP26.07■■□□□ 1.76
CCDC107-206ENST00000426546 CRAMP1Q96RY5 1269 aa26.07■■□□□ 1.76
CCDC107-206ENST00000426546 CHPF2Q9P2E5 772 aa26.07■■□□□ 1.76
CCDC107-206ENST00000426546 CNTNAP1P78357 1384 aa26.07■■□□□ 1.76
CCDC107-206ENST00000426546 LAMB2P55268 1798 aa26.06■■□□□ 1.76
CCDC107-206ENST00000426546 APAF1O14727 1248 aa26.06■■□□□ 1.76
CCDC107-206ENST00000426546 PSMD1Q99460 953 aa26.06■■□□□ 1.76
CCDC107-206ENST00000426546 CALD1Q05682 793 aaKnown RBP26.05■■□□□ 1.76
CCDC107-206ENST00000426546 GRIPAP1Q4V328 841 aa26.05■■□□□ 1.76
CCDC107-206ENST00000426546 SLC10A5Q5PT55 438 aa26.05■■□□□ 1.76
CCDC107-206ENST00000426546 NLRP3Q96P20 1036 aa26.05■■□□□ 1.76
CCDC107-206ENST00000426546 MBIPQ9NS73 344 aa26.05■■□□□ 1.76
CCDC107-206ENST00000426546 DBF4Q9UBU7 674 aaPredicted RBP26.05■■□□□ 1.76
CCDC107-206ENST00000426546 ITGBL1O95965 494 aaPredicted RBP26.04■■□□□ 1.76
CCDC107-206ENST00000426546 ZNF853P0CG23 659 aa26.04■■□□□ 1.76
CCDC107-206ENST00000426546 TCIRG1Q13488 830 aa26.04■■□□□ 1.76
CCDC107-206ENST00000426546 C3orf67Q6ZVT6 689 aa26.04■■□□□ 1.76
CCDC107-206ENST00000426546 NLRP10Q86W26 655 aa26.04■■□□□ 1.76
CCDC107-206ENST00000426546 ADAMTSL1Q8N6G6 1762 aa26.04■■□□□ 1.76
CCDC107-206ENST00000426546 IARSP41252 1262 aaKnown RBP26.03■■□□□ 1.76
CCDC107-206ENST00000426546 SYNE4Q8N205 404 aa26.03■■□□□ 1.76
CCDC107-206ENST00000426546 IFT57Q9NWB7 429 aa26.03■■□□□ 1.76
CCDC107-206ENST00000426546 HACL1Q9UJ83 578 aa26.03■■□□□ 1.76
CCDC107-206ENST00000426546 FZD9O00144 591 aa26.02■■□□□ 1.76
CCDC107-206ENST00000426546 EAPPQ56P03 285 aaPredicted RBP26.02■■□□□ 1.76
CCDC107-206ENST00000426546 DUSP27Q5VZP5 1158 aa26.02■■□□□ 1.76
CCDC107-206ENST00000426546 PPEF1O14829 653 aaPredicted RBP26.01■■□□□ 1.75
CCDC107-206ENST00000426546 GNAI1P63096 354 aa26.01■■□□□ 1.75
CCDC107-206ENST00000426546 PLBD2Q8NHP8 589 aa26.01■■□□□ 1.75
CCDC107-206ENST00000426546 HYPKQ9NX55 129 aa26.01■■□□□ 1.75
CCDC107-206ENST00000426546 TMEM88BA6NKF7 163 aa26■■□□□ 1.75
CCDC107-206ENST00000426546 FOXN1O15353 648 aa26■■□□□ 1.75
CCDC107-206ENST00000426546 EPHX2P34913 555 aa26■■□□□ 1.75
CCDC107-206ENST00000426546 TRMT112Q9UI30 125 aaKnown RBP25.99■■□□□ 1.75
CCDC107-206ENST00000426546 SH3TC1Q8TE82 1336 aa25.98■■□□□ 1.75
CCDC107-206ENST00000426546 VEGFBP49765 207 aa25.98■■□□□ 1.75
CCDC107-206ENST00000426546 ANKRD13DQ6ZTN6 518 aa25.98■■□□□ 1.75
CCDC107-206ENST00000426546 CLEC11AQ9Y240 323 aa25.98■■□□□ 1.75
CCDC107-206ENST00000426546 DDX60Q8IY21 1712 aaKnown RBP25.97■■□□□ 1.75
CCDC107-206ENST00000426546 GPC2Q8N158 579 aa25.97■■□□□ 1.75
CCDC107-206ENST00000426546 JDP2Q8WYK2 163 aa25.97■■□□□ 1.75
CCDC107-206ENST00000426546 ABCC4O15439 1325 aa25.96■■□□□ 1.75
CCDC107-206ENST00000426546 PNMA8AQ86V59 439 aaPredicted RBP25.96■■□□□ 1.75
CCDC107-206ENST00000426546 COL4A5P29400 1685 aa25.96■■□□□ 1.75
CCDC107-206ENST00000426546 HCLS1P14317 486 aaPredicted RBP25.95■■□□□ 1.74
CCDC107-206ENST00000426546 TMX4Q9H1E5 349 aaPredicted RBP25.95■■□□□ 1.74
CCDC107-206ENST00000426546 ATP6V0A2Q9Y487 856 aa25.95■■□□□ 1.74
CCDC107-206ENST00000426546 CCDC184Q52MB2 194 aa25.94■■□□□ 1.74
CCDC107-206ENST00000426546 MAP1SQ66K74 1059 aaPredicted RBP25.94■■□□□ 1.74
CCDC107-206ENST00000426546 CNTROBQ8N137 903 aa25.94■■□□□ 1.74
CCDC107-206ENST00000426546 ISCA1Q9BUE6 129 aa25.94■■□□□ 1.74
CCDC107-206ENST00000426546 TCERG1O14776 1098 aaKnown RBP25.93■■□□□ 1.74
CCDC107-206ENST00000426546 BBOX1O75936 387 aa25.93■■□□□ 1.74
CCDC107-206ENST00000426546 SLC51AQ86UW1 340 aa25.93■■□□□ 1.74
CCDC107-206ENST00000426546 PRDM10Q9NQV6 1147 aa25.93■■□□□ 1.74
CCDC107-206ENST00000426546 LARGE2Q8N3Y3 721 aa25.92■■□□□ 1.74
CCDC107-206ENST00000426546 TRIM28Q13263 835 aaKnown RBP25.91■■□□□ 1.74
CCDC107-206ENST00000426546 DDX46Q7L014 1031 aaKnown RBP25.91■■□□□ 1.74
CCDC107-206ENST00000426546 CHMP4AQ9BY43 222 aa25.91■■□□□ 1.74
CCDC107-206ENST00000426546 VPS33BQ9H267 617 aa25.91■■□□□ 1.74
CCDC107-206ENST00000426546 TAF1P21675 1872 aa25.91■■□□□ 1.74
CCDC107-206ENST00000426546 LRRC37AA6NMS7 1700 aa25.91■■□□□ 1.74
CCDC107-206ENST00000426546 LTBP1Q14766 1721 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms