RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ZBTB3Q9H5J0 574 aa19.82■□□□□ 0.76
ATG4B-209ENST00000425239 HACL1Q9UJ83 578 aa19.82■□□□□ 0.76
ATG4B-209ENST00000425239 CNTNAP1P78357 1384 aa19.82■□□□□ 0.76
ATG4B-209ENST00000425239 ERBB4Q15303 1308 aa19.81■□□□□ 0.76
ATG4B-209ENST00000425239 EPHX2P34913 555 aa19.81■□□□□ 0.76
ATG4B-209ENST00000425239 CC2D2BQ6DHV5 1058 aa19.81■□□□□ 0.76
ATG4B-209ENST00000425239 TNS4Q8IZW8 715 aa19.81■□□□□ 0.76
ATG4B-209ENST00000425239 GPC2Q8N158 579 aa19.81■□□□□ 0.76
ATG4B-209ENST00000425239 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
ATG4B-209ENST00000425239 RNF123Q5XPI4 1314 aa19.8■□□□□ 0.76
ATG4B-209ENST00000425239 LTBP1Q14766 1721 aa19.8■□□□□ 0.76
ATG4B-209ENST00000425239 SLC10A5Q5PT55 438 aa19.8■□□□□ 0.76
ATG4B-209ENST00000425239 KIF6Q6ZMV9 814 aa19.8■□□□□ 0.76
ATG4B-209ENST00000425239 NEFMP07197 916 aa19.79■□□□□ 0.76
ATG4B-209ENST00000425239 PROSER3Q2NL68 480 aa19.79■□□□□ 0.76
ATG4B-209ENST00000425239 EAPPQ56P03 285 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-209ENST00000425239 PNMA8AQ86V59 439 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-209ENST00000425239 PNNQ9H307 717 aaKnown RBP19.78■□□□□ 0.76
ATG4B-209ENST00000425239 TMEM88BA6NKF7 163 aa19.77■□□□□ 0.76
ATG4B-209ENST00000425239 VEGFBP49765 207 aa19.77■□□□□ 0.76
ATG4B-209ENST00000425239 CNTROBQ8N137 903 aa19.77■□□□□ 0.76
ATG4B-209ENST00000425239 BABAM1Q9NWV8 329 aa19.77■□□□□ 0.76
ATG4B-209ENST00000425239 SCNN1DP51172 638 aa19.76■□□□□ 0.75
ATG4B-209ENST00000425239 RIPK4P57078 832 aa19.76■□□□□ 0.75
ATG4B-209ENST00000425239 GRIPAP1Q4V328 841 aa19.76■□□□□ 0.75
ATG4B-209ENST00000425239 MAP1SQ66K74 1059 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-209ENST00000425239 JDP2Q8WYK2 163 aa19.76■□□□□ 0.75
ATG4B-209ENST00000425239 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
ATG4B-209ENST00000425239 RBM17Q96I25 401 aaKnown RBP19.76■□□□□ 0.75
ATG4B-209ENST00000425239 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
ATG4B-209ENST00000425239 FOXN1O15353 648 aa19.75■□□□□ 0.75
ATG4B-209ENST00000425239 ANXA1P04083 346 aa19.75■□□□□ 0.75
ATG4B-209ENST00000425239 TMPOP42166 694 aaKnown RBP19.75■□□□□ 0.75
ATG4B-209ENST00000425239 PARP10Q53GL7 1025 aa19.75■□□□□ 0.75
ATG4B-209ENST00000425239 MAPK8IP3Q9UPT6 1336 aa19.75■□□□□ 0.75
ATG4B-209ENST00000425239 RASSF10A6NK89 507 aa19.74■□□□□ 0.75
ATG4B-209ENST00000425239 PPP1R42Q7Z4L9 355 aa19.74■□□□□ 0.75
ATG4B-209ENST00000425239 CLEC11AQ9Y240 323 aa19.74■□□□□ 0.75
ATG4B-209ENST00000425239 PPEF1O14829 653 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-209ENST00000425239 EIF2S2P20042 333 aaKnown RBP19.73■□□□□ 0.75
ATG4B-209ENST00000425239 EPS15P42566 896 aa19.73■□□□□ 0.75
ATG4B-209ENST00000425239 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
ATG4B-209ENST00000425239 ATP6V0A2Q9Y487 856 aa19.73■□□□□ 0.75
ATG4B-209ENST00000425239 TCERG1O14776 1098 aaKnown RBP19.72■□□□□ 0.75
ATG4B-209ENST00000425239 CAPN15O75808 1086 aa19.72■□□□□ 0.75
ATG4B-209ENST00000425239 UTP14AQ9BVJ6 771 aaKnown RBP19.72■□□□□ 0.75
ATG4B-209ENST00000425239 RTFDC1Q9BY42 306 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-209ENST00000425239 WBP1LQ9NX94 342 aa19.72■□□□□ 0.75
ATG4B-209ENST00000425239 LAMB2P55268 1798 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 CHL1O00533 1208 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 EIF6P56537 245 aaKnown RBP19.71■□□□□ 0.75
ATG4B-209ENST00000425239 FMR1Q06787 632 aaKnown RBP eCLIP19.71■□□□□ 0.75
ATG4B-209ENST00000425239 RALBP1Q15311 655 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 COPS6Q7L5N1 327 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 NLRP10Q86W26 655 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 LARGE2Q8N3Y3 721 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 VPS33BQ9H267 617 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 GJA3Q9Y6H8 435 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 ABCC4O15439 1325 aa19.71■□□□□ 0.75
ATG4B-209ENST00000425239 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
ATG4B-209ENST00000425239 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
ATG4B-209ENST00000425239 TRIM35Q9UPQ4 493 aa19.7■□□□□ 0.74
ATG4B-209ENST00000425239 ANKRD36CQ5JPF3 1778 aa19.7■□□□□ 0.74
ATG4B-209ENST00000425239 TCIRG1Q13488 830 aa19.69■□□□□ 0.74
ATG4B-209ENST00000425239 DEFB115Q30KQ5 88 aa19.69■□□□□ 0.74
ATG4B-209ENST00000425239 XAGE3Q8WTP9 111 aa19.69■□□□□ 0.74
ATG4B-209ENST00000425239 PRDM10Q9NQV6 1147 aa19.69■□□□□ 0.74
ATG4B-209ENST00000425239 AOC3Q16853 763 aa19.68■□□□□ 0.74
ATG4B-209ENST00000425239 CST9Q5W186 159 aa19.68■□□□□ 0.74
ATG4B-209ENST00000425239 USP50Q70EL3 339 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-209ENST00000425239 SP8Q8IXZ3 490 aa19.68■□□□□ 0.74
ATG4B-209ENST00000425239 TAF1P21675 1872 aa19.67■□□□□ 0.74
ATG4B-209ENST00000425239 BBOX1O75936 387 aa19.67■□□□□ 0.74
ATG4B-209ENST00000425239 HCLS1P14317 486 aaPredicted RBP19.67■□□□□ 0.74
ATG4B-209ENST00000425239 CXCL9Q07325 125 aa19.67■□□□□ 0.74
ATG4B-209ENST00000425239 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
ATG4B-209ENST00000425239 PPIP5K2O43314 1243 aa19.66■□□□□ 0.74
ATG4B-209ENST00000425239 GPRC5DQ9NZD1 345 aa19.66■□□□□ 0.74
ATG4B-209ENST00000425239 ZNRF3Q9ULT6 936 aa19.66■□□□□ 0.74
ATG4B-209ENST00000425239 CTCFP49711 727 aaPredicted RBP19.65■□□□□ 0.74
ATG4B-209ENST00000425239 AIMP1Q12904 312 aaKnown RBP19.65■□□□□ 0.74
ATG4B-209ENST00000425239 HSP90AB3PQ58FF7 597 aa19.65■□□□□ 0.74
ATG4B-209ENST00000425239 NIM1KQ8IY84 436 aa19.65■□□□□ 0.74
ATG4B-209ENST00000425239 PGAP2Q9UHJ9 254 aa19.65■□□□□ 0.74
ATG4B-209ENST00000425239 WDR33Q9C0J8 1336 aaKnown RBP19.65■□□□□ 0.74
ATG4B-209ENST00000425239 TRAF5O00463 557 aa19.64■□□□□ 0.73
ATG4B-209ENST00000425239 LMOD1P29536 600 aaPredicted RBP19.64■□□□□ 0.73
ATG4B-209ENST00000425239 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
ATG4B-209ENST00000425239 KIAA2012Q0VF49 1180 aa19.64■□□□□ 0.73
ATG4B-209ENST00000425239 CCDC146Q8IYE0 955 aa19.64■□□□□ 0.73
ATG4B-209ENST00000425239 DUOX1Q9NRD9 1551 aa19.63■□□□□ 0.73
ATG4B-209ENST00000425239 CHPF2Q9P2E5 772 aa19.63■□□□□ 0.73
ATG4B-209ENST00000425239 TRMT112Q9UI30 125 aaKnown RBP19.63■□□□□ 0.73
ATG4B-209ENST00000425239 TRPM7Q96QT4 1865 aa19.62■□□□□ 0.73
ATG4B-209ENST00000425239 DDX60Q8IY21 1712 aaKnown RBP19.62■□□□□ 0.73
ATG4B-209ENST00000425239 SH3TC1Q8TE82 1336 aa19.62■□□□□ 0.73
ATG4B-209ENST00000425239 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
ATG4B-209ENST00000425239 LBX1P52954 281 aa19.62■□□□□ 0.73
ATG4B-209ENST00000425239 HIRAP54198 1017 aaPredicted RBP19.62■□□□□ 0.73
ATG4B-209ENST00000425239 GRAPQ13588 217 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms