RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PARP3Q9Y6F1 533 aa13.64□□□□□ -0.23
RFC1-203ENST00000418436 NUP98P52948 1817 aa13.64□□□□□ -0.23
RFC1-203ENST00000418436 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
RFC1-203ENST00000418436 MYL6BP14649 208 aa13.63□□□□□ -0.23
RFC1-203ENST00000418436 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
RFC1-203ENST00000418436 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
RFC1-203ENST00000418436 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
RFC1-203ENST00000418436 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
RFC1-203ENST00000418436 PROSER3Q2NL68 480 aa13.62□□□□□ -0.23
RFC1-203ENST00000418436 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
RFC1-203ENST00000418436 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
RFC1-203ENST00000418436 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
RFC1-203ENST00000418436 C10orf71Q711Q0 1435 aa13.62□□□□□ -0.23
RFC1-203ENST00000418436 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
RFC1-203ENST00000418436 TTLL7Q6ZT98 887 aa13.61□□□□□ -0.23
RFC1-203ENST00000418436 NLGN2Q8NFZ4 835 aa13.61□□□□□ -0.23
RFC1-203ENST00000418436 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
RFC1-203ENST00000418436 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
RFC1-203ENST00000418436 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
RFC1-203ENST00000418436 ELL2O00472 640 aaPredicted RBP13.6□□□□□ -0.23
RFC1-203ENST00000418436 ANXA1P04083 346 aa13.6□□□□□ -0.23
RFC1-203ENST00000418436 HLFQ16534 295 aa13.6□□□□□ -0.23
RFC1-203ENST00000418436 TSPYL6Q8N831 410 aa13.6□□□□□ -0.23
RFC1-203ENST00000418436 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
RFC1-203ENST00000418436 DBF4Q9UBU7 674 aaPredicted RBP13.6□□□□□ -0.23
RFC1-203ENST00000418436 ZNF652Q9Y2D9 606 aa13.6□□□□□ -0.23
RFC1-203ENST00000418436 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
RFC1-203ENST00000418436 SERPINB2P05120 415 aa13.59□□□□□ -0.23
RFC1-203ENST00000418436 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
RFC1-203ENST00000418436 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
RFC1-203ENST00000418436 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
RFC1-203ENST00000418436 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.23
RFC1-203ENST00000418436 ANKRD36CQ5JPF3 1778 aa13.58□□□□□ -0.23
RFC1-203ENST00000418436 TGFB2P61812 414 aa13.58□□□□□ -0.24
RFC1-203ENST00000418436 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.24
RFC1-203ENST00000418436 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
RFC1-203ENST00000418436 SETDB2Q96T68 719 aa13.58□□□□□ -0.24
RFC1-203ENST00000418436 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
RFC1-203ENST00000418436 HYPKQ9NX55 129 aa13.58□□□□□ -0.24
RFC1-203ENST00000418436 BRCA1P38398 1863 aaKnown RBP13.58□□□□□ -0.24
RFC1-203ENST00000418436 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
RFC1-203ENST00000418436 ATP10DQ9P241 1426 aa13.57□□□□□ -0.24
RFC1-203ENST00000418436 ANKRD31Q8N7Z5 1873 aa13.57□□□□□ -0.24
RFC1-203ENST00000418436 PXDNLA1KZ92 1463 aa13.57□□□□□ -0.24
RFC1-203ENST00000418436 TWISTNBQ3B726 338 aaPredicted RBP13.57□□□□□ -0.24
RFC1-203ENST00000418436 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
RFC1-203ENST00000418436 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
RFC1-203ENST00000418436 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
RFC1-203ENST00000418436 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
RFC1-203ENST00000418436 ZBTB3Q9H5J0 574 aa13.56□□□□□ -0.24
RFC1-203ENST00000418436 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
RFC1-203ENST00000418436 DLEC1Q9Y238 1755 aa13.55□□□□□ -0.24
RFC1-203ENST00000418436 VAMP4O75379 141 aa13.55□□□□□ -0.24
RFC1-203ENST00000418436 SLFN5Q08AF3 891 aa13.55□□□□□ -0.24
RFC1-203ENST00000418436 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
RFC1-203ENST00000418436 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
RFC1-203ENST00000418436 ZNF34Q8IZ26 560 aa13.55□□□□□ -0.24
RFC1-203ENST00000418436 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
RFC1-203ENST00000418436 ARFGEF2Q9Y6D5 1785 aa13.55□□□□□ -0.24
RFC1-203ENST00000418436 E9PSI1 815 aa13.54□□□□□ -0.24
RFC1-203ENST00000418436 KCNA3P22001 575 aa13.54□□□□□ -0.24
RFC1-203ENST00000418436 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
RFC1-203ENST00000418436 PLBD2Q8NHP8 589 aa13.54□□□□□ -0.24
RFC1-203ENST00000418436 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
RFC1-203ENST00000418436 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
RFC1-203ENST00000418436 DPEP1P16444 411 aa13.53□□□□□ -0.24
RFC1-203ENST00000418436 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
RFC1-203ENST00000418436 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
RFC1-203ENST00000418436 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
RFC1-203ENST00000418436 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
RFC1-203ENST00000418436 IBTKQ9P2D0 1353 aaPredicted RBP13.53□□□□□ -0.24
RFC1-203ENST00000418436 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
RFC1-203ENST00000418436 TCIRG1Q13488 830 aa13.52□□□□□ -0.25
RFC1-203ENST00000418436 HSP90AB3PQ58FF7 597 aa13.52□□□□□ -0.25
RFC1-203ENST00000418436 TPTE2Q6XPS3 522 aa13.52□□□□□ -0.25
RFC1-203ENST00000418436 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.25
RFC1-203ENST00000418436 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
RFC1-203ENST00000418436 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
RFC1-203ENST00000418436 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
RFC1-203ENST00000418436 GPTP24298 496 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 CHRNA5P30532 468 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 ST5P78524 1137 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 GPR162Q16538 588 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 PARP10Q53GL7 1025 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 CCDC24Q8N4L8 307 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 STK31Q9BXU1 1019 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
RFC1-203ENST00000418436 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
RFC1-203ENST00000418436 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
RFC1-203ENST00000418436 PDE6BP35913 854 aa13.5□□□□□ -0.25
RFC1-203ENST00000418436 NLRP10Q86W26 655 aa13.5□□□□□ -0.25
RFC1-203ENST00000418436 ISCA1Q9BUE6 129 aa13.5□□□□□ -0.25
RFC1-203ENST00000418436 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
RFC1-203ENST00000418436 CHD4Q14839 1912 aa13.5□□□□□ -0.25
RFC1-203ENST00000418436 RIC1Q4ADV7 1423 aa13.49□□□□□ -0.25
RFC1-203ENST00000418436 STK25O00506 426 aa13.49□□□□□ -0.25
RFC1-203ENST00000418436 NTSR2O95665 410 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms