RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SCNN1DP51172 638 aa8.75□□□□□ -1.01
CSTF1-202ENST00000415828 TLR1Q15399 786 aa8.75□□□□□ -1.01
CSTF1-202ENST00000415828 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
CSTF1-202ENST00000415828 MBIPQ9NS73 344 aa8.75□□□□□ -1.01
CSTF1-202ENST00000415828 NUP153P49790 1475 aaKnown RBP8.75□□□□□ -1.01
CSTF1-202ENST00000415828 AFF2P51816 1311 aa8.75□□□□□ -1.01
CSTF1-202ENST00000415828 GDF10P55107 478 aa8.74□□□□□ -1.01
CSTF1-202ENST00000415828 ERICH6Q7L0X2 663 aa8.74□□□□□ -1.01
CSTF1-202ENST00000415828 TRERF1Q96PN7 1200 aa8.74□□□□□ -1.01
CSTF1-202ENST00000415828 CHD4Q14839 1912 aa8.74□□□□□ -1.01
CSTF1-202ENST00000415828 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 USP17L3A6NCW0 530 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 USP17L4A6NCW7 530 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 PALM3A6NDB9 673 aaPredicted RBP8.73□□□□□ -1.01
CSTF1-202ENST00000415828 INHAP05111 366 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 USP17L2Q6R6M4 530 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 LYPD4Q6UWN0 246 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 USP17L1Q7RTZ2 530 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
CSTF1-202ENST00000415828 RHBDD1Q8TEB9 315 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 PPP1R12CQ9BZL4 782 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 TIMELESSQ9UNS1 1208 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 BRWD3Q6RI45 1802 aa8.73□□□□□ -1.01
CSTF1-202ENST00000415828 BCL9LQ86UU0 1499 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 CDC42BPBQ9Y5S2 1711 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 MAP3K1Q13233 1512 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 THBS1P07996 1170 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 C1QTNF8P60827 252 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 PSME1Q06323 249 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 SERTAD1Q9UHV2 236 aa8.72□□□□□ -1.01
CSTF1-202ENST00000415828 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
CSTF1-202ENST00000415828 RUBCNLQ9H714 662 aa8.71□□□□□ -1.02
CSTF1-202ENST00000415828 MAFBQ9Y5Q3 323 aaPredicted RBP8.71□□□□□ -1.02
CSTF1-202ENST00000415828 MLH3Q9UHC1 1453 aa8.7□□□□□ -1.02
CSTF1-202ENST00000415828 CELA2BP08218 269 aaPredicted RBP8.7□□□□□ -1.02
CSTF1-202ENST00000415828 MSX1P28360 303 aa8.7□□□□□ -1.02
CSTF1-202ENST00000415828 LMOD1P29536 600 aaPredicted RBP8.7□□□□□ -1.02
CSTF1-202ENST00000415828 RBM6P78332 1123 aaKnown RBP8.7□□□□□ -1.02
CSTF1-202ENST00000415828 GTF2IP78347 998 aa8.7□□□□□ -1.02
CSTF1-202ENST00000415828 PLEKHM2Q8IWE5 1019 aa8.7□□□□□ -1.02
CSTF1-202ENST00000415828 QTRT2Q9H974 415 aaKnown RBP8.7□□□□□ -1.02
CSTF1-202ENST00000415828 PCDHGA11Q9Y5H2 935 aa8.7□□□□□ -1.02
CSTF1-202ENST00000415828 SPATA31A6Q5VVP1 1343 aa8.7□□□□□ -1.02
CSTF1-202ENST00000415828 DIP2AQ14689 1571 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 NWD1Q149M9 1564 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 KIF14Q15058 1648 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 TMEM229AB2RXF0 380 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 MX2P20592 715 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 RFX1P22670 979 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 PLA2G4AP47712 749 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 SMTNP53814 917 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 MAP3K10Q02779 954 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 DEFB132Q7Z7B7 95 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
CSTF1-202ENST00000415828 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
CSTF1-202ENST00000415828 MKRN1Q9UHC7 482 aaKnown RBP8.69□□□□□ -1.02
CSTF1-202ENST00000415828 CFAP65Q6ZU64 1925 aaKnown RBP8.68□□□□□ -1.02
CSTF1-202ENST00000415828 GSK3AP49840 483 aa8.68□□□□□ -1.02
CSTF1-202ENST00000415828 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
CSTF1-202ENST00000415828 PLEKHD1A6NEE1 506 aa8.67□□□□□ -1.02
CSTF1-202ENST00000415828 SUPT5HO00267 1087 aaKnown RBP8.67□□□□□ -1.02
CSTF1-202ENST00000415828 UGGT1Q9NYU2 1555 aa8.67□□□□□ -1.02
CSTF1-202ENST00000415828 LRRC9Q6ZRR7 1453 aa8.66□□□□□ -1.02
CSTF1-202ENST00000415828 FGD6Q6ZV73 1430 aa8.66□□□□□ -1.02
CSTF1-202ENST00000415828 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
CSTF1-202ENST00000415828 UBAP2LQ14157 1087 aaKnown RBP8.66□□□□□ -1.02
CSTF1-202ENST00000415828 ACDQ96AP0 544 aa8.66□□□□□ -1.02
CSTF1-202ENST00000415828 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
CSTF1-202ENST00000415828 CFHR5Q9BXR6 569 aa8.66□□□□□ -1.02
CSTF1-202ENST00000415828 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
CSTF1-202ENST00000415828 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
CSTF1-202ENST00000415828 KDM5DQ9BY66 1539 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 A6NJY4 79 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.02
CSTF1-202ENST00000415828 RASA1P20936 1047 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 RASSF7Q02833 373 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
CSTF1-202ENST00000415828 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 EFHC2Q5JST6 749 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 CFAP70Q5T0N1 1121 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 OGFOD1Q8N543 542 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 ZNF594Q96JF6 807 aaPredicted RBP8.65□□□□□ -1.02
CSTF1-202ENST00000415828 SLC4A9Q96Q91 983 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 DNAAF2Q9NVR5 837 aaKnown RBP8.65□□□□□ -1.02
CSTF1-202ENST00000415828 PHF24Q9UPV7 400 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
CSTF1-202ENST00000415828 TIAM1Q13009 1591 aa8.65□□□□□ -1.03
CSTF1-202ENST00000415828 SAMD9Q5K651 1589 aa8.65□□□□□ -1.03
CSTF1-202ENST00000415828 TMEM94Q12767 1356 aa8.64□□□□□ -1.03
CSTF1-202ENST00000415828 BCRP11274 1271 aa8.64□□□□□ -1.03
CSTF1-202ENST00000415828 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
CSTF1-202ENST00000415828 MTFR1Q15390 333 aa8.64□□□□□ -1.03
CSTF1-202ENST00000415828 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms