RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
LINC00887-202ENST00000414120 TRIM6Q9C030 488 aaPredicted RBP16.29■□□□□ 0.2
LINC00887-202ENST00000414120 YTHDC2Q9H6S0 1430 aaKnown RBP16.29■□□□□ 0.2
LINC00887-202ENST00000414120 MED14O60244 1454 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 NEBLO76041 1014 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 ARMC2Q8NEN0 867 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 ZNF396Q96N95 335 aaPredicted RBP16.28■□□□□ 0.2
LINC00887-202ENST00000414120 MKRN1Q9UHC7 482 aaKnown RBP16.28■□□□□ 0.2
LINC00887-202ENST00000414120 ELF1P32519 619 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 ZNF483Q8TF39 744 aaPredicted RBP16.28■□□□□ 0.2
LINC00887-202ENST00000414120 SLX1AQ9BQ83 275 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 USP47Q96K76 1375 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 CDKL5O76039 1030 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 MBD3O95983 291 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 ACRBPQ8NEB7 543 aa16.28■□□□□ 0.2
LINC00887-202ENST00000414120 PTPRUQ92729 1446 aa16.27■□□□□ 0.2
LINC00887-202ENST00000414120 SOS1Q07889 1333 aaPredicted RBP16.27■□□□□ 0.2
LINC00887-202ENST00000414120 A0A087WUV0 522 aaPredicted RBP16.27■□□□□ 0.2
LINC00887-202ENST00000414120 LZTS2Q9BRK4 669 aa16.27■□□□□ 0.2
LINC00887-202ENST00000414120 TSPY26PQ9H489 355 aa16.27■□□□□ 0.2
LINC00887-202ENST00000414120 SYNPO2Q9UMS6 1093 aa16.27■□□□□ 0.2
LINC00887-202ENST00000414120 SETBP1Q9Y6X0 1596 aa16.27■□□□□ 0.2
LINC00887-202ENST00000414120 RALGAPBQ86X10 1494 aa16.27■□□□□ 0.19
LINC00887-202ENST00000414120 NRXN3Q9Y4C0 1643 aa16.27■□□□□ 0.19
LINC00887-202ENST00000414120 H2AFXP16104 143 aaPredicted RBP16.27■□□□□ 0.19
LINC00887-202ENST00000414120 TBC1D25Q3MII6 688 aa16.27■□□□□ 0.19
LINC00887-202ENST00000414120 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.19
LINC00887-202ENST00000414120 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.19
LINC00887-202ENST00000414120 MCM6Q14566 821 aa16.26■□□□□ 0.19
LINC00887-202ENST00000414120 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
LINC00887-202ENST00000414120 SNUPNO95149 360 aaKnown RBP16.26■□□□□ 0.19
LINC00887-202ENST00000414120 RASA3Q14644 834 aa16.26■□□□□ 0.19
LINC00887-202ENST00000414120 FBXO38Q6PIJ6 1188 aa16.26■□□□□ 0.19
LINC00887-202ENST00000414120 UTP14AQ9BVJ6 771 aaKnown RBP16.26■□□□□ 0.19
LINC00887-202ENST00000414120 USP25Q9UHP3 1055 aa16.26■□□□□ 0.19
LINC00887-202ENST00000414120 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
LINC00887-202ENST00000414120 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
LINC00887-202ENST00000414120 SYNRGQ9UMZ2 1314 aa16.25■□□□□ 0.19
LINC00887-202ENST00000414120 AGAP3Q96P47 875 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 ASXL1Q8IXJ9 1541 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 PLA2G4AP47712 749 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 SMARCE1Q969G3 411 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 SSFA2P28290 1259 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 MRPL12P52815 198 aaKnown RBP16.24■□□□□ 0.19
LINC00887-202ENST00000414120 CRACR2AQ9BSW2 395 aa16.24■□□□□ 0.19
LINC00887-202ENST00000414120 GOLGA2Q08379 1002 aa16.23■□□□□ 0.19
LINC00887-202ENST00000414120 TADA2BQ86TJ2 420 aa16.23■□□□□ 0.19
LINC00887-202ENST00000414120 HELBQ8NG08 1087 aaPredicted RBP16.23■□□□□ 0.19
LINC00887-202ENST00000414120 BLOC1S6Q9UL45 172 aa16.23■□□□□ 0.19
LINC00887-202ENST00000414120 KDRP35968 1356 aa16.23■□□□□ 0.19
LINC00887-202ENST00000414120 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
LINC00887-202ENST00000414120 NME8Q8N427 588 aa16.23■□□□□ 0.19
LINC00887-202ENST00000414120 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
LINC00887-202ENST00000414120 TTC12Q9H892 705 aaPredicted RBP16.23■□□□□ 0.19
LINC00887-202ENST00000414120 RDXP35241 583 aaKnown RBP16.22■□□□□ 0.19
LINC00887-202ENST00000414120 DDR1Q08345 913 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 SYAP1Q96A49 352 aaPredicted RBP16.22■□□□□ 0.19
LINC00887-202ENST00000414120 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 GOPCQ9HD26 462 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 PNMA6AP0CW24 399 aaPredicted RBP16.22■□□□□ 0.19
LINC00887-202ENST00000414120 MNAT1P51948 309 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 RNF214Q8ND24 703 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 TCP11Q8WWU5 503 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 KIF2CQ99661 725 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 IQCGQ9H095 443 aaKnown RBP16.22■□□□□ 0.19
LINC00887-202ENST00000414120 MCM8Q9UJA3 840 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 ADGRB1O14514 1584 aa16.22■□□□□ 0.19
LINC00887-202ENST00000414120 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
LINC00887-202ENST00000414120 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.19
LINC00887-202ENST00000414120 TMEM94Q12767 1356 aa16.21■□□□□ 0.19
LINC00887-202ENST00000414120 PECAM1P16284 738 aaPredicted RBP16.21■□□□□ 0.19
LINC00887-202ENST00000414120 EIF5P55010 431 aaKnown RBP16.21■□□□□ 0.19
LINC00887-202ENST00000414120 PSMD2Q13200 908 aa16.21■□□□□ 0.19
LINC00887-202ENST00000414120 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
LINC00887-202ENST00000414120 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
LINC00887-202ENST00000414120 ABCC11Q96J66 1382 aa16.21■□□□□ 0.18
LINC00887-202ENST00000414120 ZNF280DQ6N043 979 aa16.2■□□□□ 0.18
LINC00887-202ENST00000414120 ZRANB2O95218 330 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC00887-202ENST00000414120 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
LINC00887-202ENST00000414120 GPRASP1Q5JY77 1395 aa16.2■□□□□ 0.18
LINC00887-202ENST00000414120 RTN2O75298 545 aa16.2■□□□□ 0.18
LINC00887-202ENST00000414120 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
LINC00887-202ENST00000414120 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
LINC00887-202ENST00000414120 NFXL1Q6ZNB6 911 aa16.19■□□□□ 0.18
LINC00887-202ENST00000414120 KCNB2Q92953 911 aa16.19■□□□□ 0.18
LINC00887-202ENST00000414120 THOC1Q96FV9 657 aaKnown RBP16.19■□□□□ 0.18
LINC00887-202ENST00000414120 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
LINC00887-202ENST00000414120 RMI1Q9H9A7 625 aa16.19■□□□□ 0.18
LINC00887-202ENST00000414120 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
LINC00887-202ENST00000414120 PES1O00541 588 aaKnown RBP16.19■□□□□ 0.18
LINC00887-202ENST00000414120 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
LINC00887-202ENST00000414120 ATL2Q8NHH9 583 aa16.19■□□□□ 0.18
LINC00887-202ENST00000414120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC00887-202ENST00000414120 LSM14AQ8ND56 463 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms