RNA–Protein interactions for RNA: ENST00000412759.2

SRGAP2C-203, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-203ENST00000412759 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
SRGAP2C-203ENST00000412759 FZD9O00144 591 aa20.79■□□□□ 0.92
SRGAP2C-203ENST00000412759 OLFM4Q6UX06 510 aa20.79■□□□□ 0.92
SRGAP2C-203ENST00000412759 PPP1R42Q7Z4L9 355 aa20.79■□□□□ 0.92
SRGAP2C-203ENST00000412759 NUTM1Q86Y26 1132 aa20.79■□□□□ 0.92
SRGAP2C-203ENST00000412759 RBM17Q96I25 401 aaKnown RBP20.79■□□□□ 0.92
SRGAP2C-203ENST00000412759 MKRN1Q9UHC7 482 aaKnown RBP20.79■□□□□ 0.92
SRGAP2C-203ENST00000412759 CCDC88AQ3V6T2 1871 aa20.79■□□□□ 0.92
SRGAP2C-203ENST00000412759 GPTP24298 496 aa20.78■□□□□ 0.92
SRGAP2C-203ENST00000412759 EPHX2P34913 555 aa20.78■□□□□ 0.92
SRGAP2C-203ENST00000412759 EIF6P56537 245 aaKnown RBP20.78■□□□□ 0.92
SRGAP2C-203ENST00000412759 TTLL7Q6ZT98 887 aa20.78■□□□□ 0.92
SRGAP2C-203ENST00000412759 ZBTB3Q9H5J0 574 aa20.78■□□□□ 0.92
SRGAP2C-203ENST00000412759 COL11A2P13942 1736 aaPredicted RBP20.78■□□□□ 0.92
SRGAP2C-203ENST00000412759 LAMB4A4D0S4 1761 aa20.77■□□□□ 0.92
SRGAP2C-203ENST00000412759 TMEM88BA6NKF7 163 aa20.77■□□□□ 0.92
SRGAP2C-203ENST00000412759 PDIA6Q15084 440 aa20.77■□□□□ 0.92
SRGAP2C-203ENST00000412759 PARP10Q53GL7 1025 aa20.77■□□□□ 0.92
SRGAP2C-203ENST00000412759 GIGYF2Q6Y7W6 1299 aaKnown RBP20.77■□□□□ 0.92
SRGAP2C-203ENST00000412759 CRAMP1Q96RY5 1269 aa20.77■□□□□ 0.92
SRGAP2C-203ENST00000412759 ZNF34Q8IZ26 560 aa20.76■□□□□ 0.91
SRGAP2C-203ENST00000412759 NLRP3Q96P20 1036 aa20.76■□□□□ 0.91
SRGAP2C-203ENST00000412759 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
SRGAP2C-203ENST00000412759 DICER1Q9UPY3 1922 aaKnown RBP20.75■□□□□ 0.91
SRGAP2C-203ENST00000412759 ITGBL1O95965 494 aaPredicted RBP20.75■□□□□ 0.91
SRGAP2C-203ENST00000412759 EIF2S2P20042 333 aaKnown RBP20.75■□□□□ 0.91
SRGAP2C-203ENST00000412759 SUSD4Q5VX71 490 aa20.75■□□□□ 0.91
SRGAP2C-203ENST00000412759 LRP10Q7Z4F1 713 aa20.75■□□□□ 0.91
SRGAP2C-203ENST00000412759 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
SRGAP2C-203ENST00000412759 PASKQ96RG2 1323 aa20.75■□□□□ 0.91
SRGAP2C-203ENST00000412759 IBTKQ9P2D0 1353 aaPredicted RBP20.74■□□□□ 0.91
SRGAP2C-203ENST00000412759 LMOD1P29536 600 aaPredicted RBP20.74■□□□□ 0.91
SRGAP2C-203ENST00000412759 CNTROBQ8N137 903 aa20.74■□□□□ 0.91
SRGAP2C-203ENST00000412759 HOXB7P09629 217 aa20.73■□□□□ 0.91
SRGAP2C-203ENST00000412759 LARGE2Q8N3Y3 721 aa20.73■□□□□ 0.91
SRGAP2C-203ENST00000412759 UTP14AQ9BVJ6 771 aaKnown RBP20.73■□□□□ 0.91
SRGAP2C-203ENST00000412759 VPS33BQ9H267 617 aa20.73■□□□□ 0.91
SRGAP2C-203ENST00000412759 GJA3Q9Y6H8 435 aa20.73■□□□□ 0.91
SRGAP2C-203ENST00000412759 CAPN15O75808 1086 aa20.72■□□□□ 0.91
SRGAP2C-203ENST00000412759 AIDAQ96BJ3 306 aa20.72■□□□□ 0.91
SRGAP2C-203ENST00000412759 DDX21Q9NR30 783 aaKnown RBP eCLIP20.72■□□□□ 0.91
SRGAP2C-203ENST00000412759 RNF123Q5XPI4 1314 aa20.72■□□□□ 0.91
SRGAP2C-203ENST00000412759 CNTNAP1P78357 1384 aa20.72■□□□□ 0.91
SRGAP2C-203ENST00000412759 APAF1O14727 1248 aa20.71■□□□□ 0.91
SRGAP2C-203ENST00000412759 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
SRGAP2C-203ENST00000412759 CALD1Q05682 793 aaKnown RBP20.71■□□□□ 0.91
SRGAP2C-203ENST00000412759 HSP90AB3PQ58FF7 597 aa20.71■□□□□ 0.91
SRGAP2C-203ENST00000412759 SLC10A5Q5PT55 438 aa20.71■□□□□ 0.91
SRGAP2C-203ENST00000412759 LAS1LQ9Y4W2 734 aaKnown RBP20.71■□□□□ 0.91
SRGAP2C-203ENST00000412759 UBN2Q6ZU65 1347 aa20.71■□□□□ 0.91
SRGAP2C-203ENST00000412759 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
SRGAP2C-203ENST00000412759 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
SRGAP2C-203ENST00000412759 NTSR2O95665 410 aa20.7■□□□□ 0.9
SRGAP2C-203ENST00000412759 ZNF853P0CG23 659 aa20.7■□□□□ 0.9
SRGAP2C-203ENST00000412759 ABCC12Q96J65 1359 aa20.7■□□□□ 0.9
SRGAP2C-203ENST00000412759 NUP98P52948 1817 aa20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 ZNF316A6NFI3 1004 aaPredicted RBP20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 BBOX1O75936 387 aa20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 DEFB115Q30KQ5 88 aa20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 MAP1SQ66K74 1059 aaPredicted RBP20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 NIM1KQ8IY84 436 aa20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 SUPT20HQ8NEM7 779 aa20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 SCN4AP35499 1836 aa20.69■□□□□ 0.9
SRGAP2C-203ENST00000412759 VEGFBP49765 207 aa20.68■□□□□ 0.9
SRGAP2C-203ENST00000412759 PROSER3Q2NL68 480 aa20.68■□□□□ 0.9
SRGAP2C-203ENST00000412759 COPS6Q7L5N1 327 aa20.68■□□□□ 0.9
SRGAP2C-203ENST00000412759 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
SRGAP2C-203ENST00000412759 CTCFP49711 727 aaPredicted RBP20.67■□□□□ 0.9
SRGAP2C-203ENST00000412759 USP50Q70EL3 339 aaPredicted RBP20.67■□□□□ 0.9
SRGAP2C-203ENST00000412759 PRDM10Q9NQV6 1147 aa20.67■□□□□ 0.9
SRGAP2C-203ENST00000412759 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
SRGAP2C-203ENST00000412759 PPIP5K2O43314 1243 aa20.66■□□□□ 0.9
SRGAP2C-203ENST00000412759 GNAI1P63096 354 aa20.66■□□□□ 0.9
SRGAP2C-203ENST00000412759 CHMP4AQ9BY43 222 aa20.66■□□□□ 0.9
SRGAP2C-203ENST00000412759 DBF4Q9UBU7 674 aaPredicted RBP20.66■□□□□ 0.9
SRGAP2C-203ENST00000412759 ABT1Q9ULW3 272 aaKnown RBP20.66■□□□□ 0.9
SRGAP2C-203ENST00000412759 RASSF10A6NK89 507 aa20.65■□□□□ 0.9
SRGAP2C-203ENST00000412759 ANXA1P04083 346 aa20.65■□□□□ 0.9
SRGAP2C-203ENST00000412759 AIMP1Q12904 312 aaKnown RBP20.65■□□□□ 0.9
SRGAP2C-203ENST00000412759 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
SRGAP2C-203ENST00000412759 NCBP3Q53F19 620 aaKnown RBP20.65■□□□□ 0.9
SRGAP2C-203ENST00000412759 XAGE3Q8WTP9 111 aa20.65■□□□□ 0.9
SRGAP2C-203ENST00000412759 MBIPQ9NS73 344 aa20.65■□□□□ 0.9
SRGAP2C-203ENST00000412759 FOXN1O15353 648 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 MAP2K1Q02750 393 aaPredicted RBP20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 TCIRG1Q13488 830 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 DUSP27Q5VZP5 1158 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 SP8Q8IXZ3 490 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 ZNRF3Q9ULT6 936 aa20.64■□□□□ 0.89
SRGAP2C-203ENST00000412759 CACNA1SQ13698 1873 aa20.63■□□□□ 0.89
SRGAP2C-203ENST00000412759 EPS15P42566 896 aa20.63■□□□□ 0.89
SRGAP2C-203ENST00000412759 DPP8Q6V1X1 898 aaPredicted RBP20.63■□□□□ 0.89
SRGAP2C-203ENST00000412759 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
SRGAP2C-203ENST00000412759 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms