RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 ERBB4Q15303 1308 aa21.71■■□□□ 1.07
SCAMP4-203ENST00000411971 IBTKQ9P2D0 1353 aaPredicted RBP21.71■■□□□ 1.07
SCAMP4-203ENST00000411971 SYNE4Q8N205 404 aa21.7■■□□□ 1.06
SCAMP4-203ENST00000411971 NYXQ9GZU5 481 aa21.7■■□□□ 1.06
SCAMP4-203ENST00000411971 ADAMTSL1Q8N6G6 1762 aa21.69■■□□□ 1.06
SCAMP4-203ENST00000411971 ADAMTS8Q9UP79 889 aa21.69■■□□□ 1.06
SCAMP4-203ENST00000411971 LTBP1Q14766 1721 aa21.69■■□□□ 1.06
SCAMP4-203ENST00000411971 CHL1O00533 1208 aa21.68■■□□□ 1.06
SCAMP4-203ENST00000411971 ALDH1B1P30837 517 aa21.68■■□□□ 1.06
SCAMP4-203ENST00000411971 HOXA10P31260 410 aaPredicted RBP21.68■■□□□ 1.06
SCAMP4-203ENST00000411971 ZNF428Q96B54 188 aa21.68■■□□□ 1.06
SCAMP4-203ENST00000411971 L3MBTL3Q96JM7 780 aaPredicted RBP21.67■■□□□ 1.06
SCAMP4-203ENST00000411971 BABAM1Q9NWV8 329 aa21.67■■□□□ 1.06
SCAMP4-203ENST00000411971 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-203ENST00000411971 IARSP41252 1262 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-203ENST00000411971 COPS6Q7L5N1 327 aa21.66■■□□□ 1.06
SCAMP4-203ENST00000411971 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
SCAMP4-203ENST00000411971 XAGE3Q8WTP9 111 aa21.66■■□□□ 1.06
SCAMP4-203ENST00000411971 RUNDC1Q96C34 613 aa21.66■■□□□ 1.06
SCAMP4-203ENST00000411971 FZD9O00144 591 aa21.65■■□□□ 1.06
SCAMP4-203ENST00000411971 AIMP1Q12904 312 aaKnown RBP21.65■■□□□ 1.06
SCAMP4-203ENST00000411971 CHADLQ6NUI6 762 aa21.65■■□□□ 1.06
SCAMP4-203ENST00000411971 TAF1DQ9H5J8 278 aaPredicted RBP21.65■■□□□ 1.06
SCAMP4-203ENST00000411971 DDX60Q8IY21 1712 aaKnown RBP21.65■■□□□ 1.06
SCAMP4-203ENST00000411971 COL4A1P02462 1669 aa21.65■■□□□ 1.06
SCAMP4-203ENST00000411971 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.05
SCAMP4-203ENST00000411971 PRKRIP1Q9H875 184 aaPredicted RBP21.64■■□□□ 1.05
SCAMP4-203ENST00000411971 LAS1LQ9Y4W2 734 aaKnown RBP21.64■■□□□ 1.05
SCAMP4-203ENST00000411971 LMOD3Q0VAK6 560 aa21.63■■□□□ 1.05
SCAMP4-203ENST00000411971 CRAMP1Q96RY5 1269 aa21.63■■□□□ 1.05
SCAMP4-203ENST00000411971 PSMD1Q99460 953 aa21.63■■□□□ 1.05
SCAMP4-203ENST00000411971 RNF123Q5XPI4 1314 aa21.62■■□□□ 1.05
SCAMP4-203ENST00000411971 PARP10Q53GL7 1025 aa21.62■■□□□ 1.05
SCAMP4-203ENST00000411971 SLC10A5Q5PT55 438 aa21.62■■□□□ 1.05
SCAMP4-203ENST00000411971 NLRP10Q86W26 655 aa21.62■■□□□ 1.05
SCAMP4-203ENST00000411971 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
SCAMP4-203ENST00000411971 PPEF1O14829 653 aaPredicted RBP21.61■■□□□ 1.05
SCAMP4-203ENST00000411971 HCLS1P14317 486 aaPredicted RBP21.61■■□□□ 1.05
SCAMP4-203ENST00000411971 PPP1R42Q7Z4L9 355 aa21.61■■□□□ 1.05
SCAMP4-203ENST00000411971 UTP14AQ9BVJ6 771 aaKnown RBP21.61■■□□□ 1.05
SCAMP4-203ENST00000411971 DDX21Q9NR30 783 aaKnown RBP eCLIP21.61■■□□□ 1.05
SCAMP4-203ENST00000411971 PASKQ96RG2 1323 aa21.6■■□□□ 1.05
SCAMP4-203ENST00000411971 WDR43Q15061 677 aaKnown RBP eCLIP21.6■■□□□ 1.05
SCAMP4-203ENST00000411971 COL13A1Q5TAT6 717 aaPredicted RBP21.6■■□□□ 1.05
SCAMP4-203ENST00000411971 RBM17Q96I25 401 aaKnown RBP21.6■■□□□ 1.05
SCAMP4-203ENST00000411971 ABCC4O15439 1325 aa21.59■■□□□ 1.05
SCAMP4-203ENST00000411971 ITGBL1O95965 494 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-203ENST00000411971 TCIRG1Q13488 830 aa21.58■■□□□ 1.05
SCAMP4-203ENST00000411971 LDHDQ86WU2 507 aa21.58■■□□□ 1.05
SCAMP4-203ENST00000411971 NLRP3Q96P20 1036 aa21.58■■□□□ 1.05
SCAMP4-203ENST00000411971 HACL1Q9UJ83 578 aa21.58■■□□□ 1.05
SCAMP4-203ENST00000411971 IQCA1LA6NCM1 817 aa21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 EPHX2P34913 555 aa21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 CCDC184Q52MB2 194 aa21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 EAPPQ56P03 285 aaPredicted RBP21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 CC2D2BQ6DHV5 1058 aa21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 MBIPQ9NS73 344 aa21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 MKRN1Q9UHC7 482 aaKnown RBP21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 DUOX1Q9NRD9 1551 aa21.57■■□□□ 1.04
SCAMP4-203ENST00000411971 ZNF853P0CG23 659 aa21.56■■□□□ 1.04
SCAMP4-203ENST00000411971 ATP6V0A2Q9Y487 856 aa21.56■■□□□ 1.04
SCAMP4-203ENST00000411971 LRRC37AA6NMS7 1700 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 APAF1O14727 1248 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 AOC3Q16853 763 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 HDGFL1Q5TGJ6 251 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 DUSP27Q5VZP5 1158 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 GPC2Q8N158 579 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 CFAP44Q96MT7 982 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 CREBZFQ9NS37 354 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 GJA3Q9Y6H8 435 aa21.55■■□□□ 1.04
SCAMP4-203ENST00000411971 ATP5J2-PTCD1G3V325 749 aa21.54■■□□□ 1.04
SCAMP4-203ENST00000411971 SCNN1DP51172 638 aa21.54■■□□□ 1.04
SCAMP4-203ENST00000411971 FMR1Q06787 632 aaKnown RBP eCLIP21.54■■□□□ 1.04
SCAMP4-203ENST00000411971 MAP1SQ66K74 1059 aaPredicted RBP21.54■■□□□ 1.04
SCAMP4-203ENST00000411971 LARGE2Q8N3Y3 721 aa21.54■■□□□ 1.04
SCAMP4-203ENST00000411971 JDP2Q8WYK2 163 aa21.54■■□□□ 1.04
SCAMP4-203ENST00000411971 TRMT112Q9UI30 125 aaKnown RBP21.54■■□□□ 1.04
SCAMP4-203ENST00000411971 HSPA1AP0DMV8 641 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-203ENST00000411971 HSPA1BP0DMV9 641 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-203ENST00000411971 EPS15P42566 896 aa21.53■■□□□ 1.04
SCAMP4-203ENST00000411971 ISCA1Q9BUE6 129 aa21.53■■□□□ 1.04
SCAMP4-203ENST00000411971 HSP90AB3PQ58FF7 597 aa21.52■■□□□ 1.04
SCAMP4-203ENST00000411971 PLBD2Q8NHP8 589 aa21.52■■□□□ 1.04
SCAMP4-203ENST00000411971 SH3TC1Q8TE82 1336 aa21.52■■□□□ 1.03
SCAMP4-203ENST00000411971 HOXB7P09629 217 aa21.51■■□□□ 1.03
SCAMP4-203ENST00000411971 ANKRD13DQ6ZTN6 518 aa21.51■■□□□ 1.03
SCAMP4-203ENST00000411971 PHAXQ9H814 394 aaKnown RBP21.51■■□□□ 1.03
SCAMP4-203ENST00000411971 CLEC11AQ9Y240 323 aa21.51■■□□□ 1.03
SCAMP4-203ENST00000411971 ELL2O00472 640 aaPredicted RBP21.5■■□□□ 1.03
SCAMP4-203ENST00000411971 PPIP5K2O43314 1243 aa21.5■■□□□ 1.03
SCAMP4-203ENST00000411971 EIF6P56537 245 aaKnown RBP21.5■■□□□ 1.03
SCAMP4-203ENST00000411971 RTL5Q5HYW3 569 aaPredicted RBP21.5■■□□□ 1.03
SCAMP4-203ENST00000411971 FAM89AQ96GI7 184 aa21.5■■□□□ 1.03
SCAMP4-203ENST00000411971 RTFDC1Q9BY42 306 aaPredicted RBP21.5■■□□□ 1.03
SCAMP4-203ENST00000411971 CNTNAP1P78357 1384 aa21.49■■□□□ 1.03
SCAMP4-203ENST00000411971 SP8Q8IXZ3 490 aa21.49■■□□□ 1.03
SCAMP4-203ENST00000411971 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
SCAMP4-203ENST00000411971 DBF4Q9UBU7 674 aaPredicted RBP21.49■■□□□ 1.03
SCAMP4-203ENST00000411971 CXCL9Q07325 125 aa21.48■■□□□ 1.03
SCAMP4-203ENST00000411971 GRAPQ13588 217 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms