RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 PTPRNQ16849 979 aa11.33□□□□□ -0.6
CCDC196-203ENST00000411796 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
CCDC196-203ENST00000411796 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
CCDC196-203ENST00000411796 CDCA7Q9BWT1 371 aaPredicted RBP11.33□□□□□ -0.6
CCDC196-203ENST00000411796 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
CCDC196-203ENST00000411796 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
CCDC196-203ENST00000411796 LRP5O75197 1615 aa11.33□□□□□ -0.6
CCDC196-203ENST00000411796 NFAT5O94916 1531 aa11.33□□□□□ -0.6
CCDC196-203ENST00000411796 FAM83GA6ND36 823 aa11.32□□□□□ -0.6
CCDC196-203ENST00000411796 LRRN4Q8WUT4 740 aa11.32□□□□□ -0.6
CCDC196-203ENST00000411796 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
CCDC196-203ENST00000411796 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
CCDC196-203ENST00000411796 HSP90AB2PQ58FF8 381 aa11.31□□□□□ -0.6
CCDC196-203ENST00000411796 NUTM2GQ5VZR2 741 aa11.31□□□□□ -0.6
CCDC196-203ENST00000411796 CCDC125Q86Z20 511 aa11.31□□□□□ -0.6
CCDC196-203ENST00000411796 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
CCDC196-203ENST00000411796 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
CCDC196-203ENST00000411796 EMILIN1Q9Y6C2 1016 aa11.31□□□□□ -0.6
CCDC196-203ENST00000411796 KDRP35968 1356 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 KIAA0232Q92628 1395 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 NEFMP07197 916 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 CCNYL3P0C7X3 344 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 YY1P25490 414 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
CCDC196-203ENST00000411796 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
CCDC196-203ENST00000411796 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC196-203ENST00000411796 PTCRAQ6ISU1 281 aaPredicted RBP11.3□□□□□ -0.6
CCDC196-203ENST00000411796 NGLY1Q96IV0 654 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
CCDC196-203ENST00000411796 HTATSF1O43719 755 aaKnown RBP11.29□□□□□ -0.6
CCDC196-203ENST00000411796 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
CCDC196-203ENST00000411796 EVA1CP58658 441 aa11.29□□□□□ -0.6
CCDC196-203ENST00000411796 AMOTQ4VCS5 1084 aa11.29□□□□□ -0.6
CCDC196-203ENST00000411796 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
CCDC196-203ENST00000411796 NCAPD2Q15021 1401 aa11.28□□□□□ -0.6
CCDC196-203ENST00000411796 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
CCDC196-203ENST00000411796 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
CCDC196-203ENST00000411796 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
CCDC196-203ENST00000411796 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
CCDC196-203ENST00000411796 ANKRD24Q8TF21 1146 aa11.28□□□□□ -0.6
CCDC196-203ENST00000411796 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
CCDC196-203ENST00000411796 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
CCDC196-203ENST00000411796 MAP2P11137 1827 aaKnown RBP11.28□□□□□ -0.6
CCDC196-203ENST00000411796 SLIT2O94813 1529 aa11.27□□□□□ -0.61
CCDC196-203ENST00000411796 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
CCDC196-203ENST00000411796 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
CCDC196-203ENST00000411796 VPS72Q15906 364 aa11.27□□□□□ -0.61
CCDC196-203ENST00000411796 BANK1Q8NDB2 785 aa11.27□□□□□ -0.61
CCDC196-203ENST00000411796 SNRKQ9NRH2 765 aa11.27□□□□□ -0.61
CCDC196-203ENST00000411796 FBLN1P23142 703 aa11.26□□□□□ -0.61
CCDC196-203ENST00000411796 CTHP32929 405 aa11.26□□□□□ -0.61
CCDC196-203ENST00000411796 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
CCDC196-203ENST00000411796 HMX1Q9NP08 348 aaPredicted RBP11.26□□□□□ -0.61
CCDC196-203ENST00000411796 BTG4Q9NY30 223 aa11.26□□□□□ -0.61
CCDC196-203ENST00000411796 MAP10Q9P2G4 905 aa11.26□□□□□ -0.61
CCDC196-203ENST00000411796 MARF1Q9Y4F3 1742 aaKnown RBP11.26□□□□□ -0.61
CCDC196-203ENST00000411796 CRYBG1Q9Y4K1 1723 aa11.26□□□□□ -0.61
CCDC196-203ENST00000411796 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
CCDC196-203ENST00000411796 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
CCDC196-203ENST00000411796 SLC19A1P41440 591 aa11.25□□□□□ -0.61
CCDC196-203ENST00000411796 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC196-203ENST00000411796 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
CCDC196-203ENST00000411796 PRKD2Q9BZL6 878 aa11.25□□□□□ -0.61
CCDC196-203ENST00000411796 COL14A1Q05707 1796 aaKnown RBP11.25□□□□□ -0.61
CCDC196-203ENST00000411796 COL18A1P39060 1754 aa11.24□□□□□ -0.61
CCDC196-203ENST00000411796 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
CCDC196-203ENST00000411796 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
CCDC196-203ENST00000411796 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
CCDC196-203ENST00000411796 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
CCDC196-203ENST00000411796 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
CCDC196-203ENST00000411796 TRPC5Q9UL62 973 aaPredicted RBP11.24□□□□□ -0.61
CCDC196-203ENST00000411796 CRB1P82279 1406 aa11.24□□□□□ -0.61
CCDC196-203ENST00000411796 ZBTB24O43167 697 aaPredicted RBP11.23□□□□□ -0.61
CCDC196-203ENST00000411796 HSP90AB1P08238 724 aaKnown RBP11.23□□□□□ -0.61
CCDC196-203ENST00000411796 HMGB2P26583 209 aaKnown RBP11.23□□□□□ -0.61
CCDC196-203ENST00000411796 CALD1Q05682 793 aaKnown RBP11.23□□□□□ -0.61
CCDC196-203ENST00000411796 LMOD3Q0VAK6 560 aa11.23□□□□□ -0.61
CCDC196-203ENST00000411796 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
CCDC196-203ENST00000411796 DEFB132Q7Z7B7 95 aa11.23□□□□□ -0.61
CCDC196-203ENST00000411796 TCP11L2Q8N4U5 519 aa11.23□□□□□ -0.61
CCDC196-203ENST00000411796 EPS8L1Q8TE68 723 aa11.23□□□□□ -0.61
CCDC196-203ENST00000411796 COL5A2P05997 1499 aaPredicted RBP11.23□□□□□ -0.61
CCDC196-203ENST00000411796 RPIAP49247 311 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 NR6A1Q15406 480 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 SULT6B1Q6IMI4 303 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 TOM1L2Q6ZVM7 507 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 LMO7Q8WWI1 1683 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 UNC93B1Q9H1C4 597 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 USP21Q9UK80 565 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 SPG7Q9UQ90 795 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 CAMTA1Q9Y6Y1 1673 aa11.22□□□□□ -0.61
CCDC196-203ENST00000411796 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 BCL9LQ86UU0 1499 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
CCDC196-203ENST00000411796 U2SURPO15042 1029 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms