RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 CACNA1AO00555 2505 aa10.04□□□□□ -0.8
UBE2F-204ENST00000409953 TJP1Q07157 1748 aa10.04□□□□□ -0.8
UBE2F-204ENST00000409953 SOS1Q07889 1333 aaPredicted RBP10.04□□□□□ -0.8
UBE2F-204ENST00000409953 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
UBE2F-204ENST00000409953 SLC10A3P09131 477 aa10.03□□□□□ -0.8
UBE2F-204ENST00000409953 SRGNP10124 158 aa10.03□□□□□ -0.8
UBE2F-204ENST00000409953 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
UBE2F-204ENST00000409953 PRR5LQ6MZQ0 368 aa10.03□□□□□ -0.8
UBE2F-204ENST00000409953 OLFM4Q6UX06 510 aa10.03□□□□□ -0.8
UBE2F-204ENST00000409953 HDGFL2Q7Z4V5 671 aaPredicted RBP10.03□□□□□ -0.8
UBE2F-204ENST00000409953 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
UBE2F-204ENST00000409953 COL15A1P39059 1388 aa10.02□□□□□ -0.8
UBE2F-204ENST00000409953 GPR25O00155 361 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 PRKAR2AP13861 404 aaKnown RBP10.02□□□□□ -0.81
UBE2F-204ENST00000409953 CDC37L1Q7L3B6 337 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 PPARGC1BQ86YN6 1023 aaKnown RBP10.02□□□□□ -0.81
UBE2F-204ENST00000409953 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 MASTLQ96GX5 879 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 COG3Q96JB2 828 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 GBA2Q9HCG7 927 aaPredicted RBP10.02□□□□□ -0.81
UBE2F-204ENST00000409953 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 CENPFP49454 3210 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 COL4A5P29400 1685 aa10.02□□□□□ -0.81
UBE2F-204ENST00000409953 LAMB4A4D0S4 1761 aa10.01□□□□□ -0.81
UBE2F-204ENST00000409953 ANKRD13DQ6ZTN6 518 aa10.01□□□□□ -0.81
UBE2F-204ENST00000409953 RTKN2Q8IZC4 609 aa10.01□□□□□ -0.81
UBE2F-204ENST00000409953 SNX27Q96L92 541 aa10.01□□□□□ -0.81
UBE2F-204ENST00000409953 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
UBE2F-204ENST00000409953 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
UBE2F-204ENST00000409953 DLK2Q6UY11 383 aa10□□□□□ -0.81
UBE2F-204ENST00000409953 DEFB123Q8N688 67 aa10□□□□□ -0.81
UBE2F-204ENST00000409953 C2orf69Q8N8R5 385 aa10□□□□□ -0.81
UBE2F-204ENST00000409953 GPRC5DQ9NZD1 345 aa10□□□□□ -0.81
UBE2F-204ENST00000409953 PGAP2Q9UHJ9 254 aa10□□□□□ -0.81
UBE2F-204ENST00000409953 ERVV-2B6SEH9 535 aa9.99□□□□□ -0.81
UBE2F-204ENST00000409953 FKTNO75072 461 aa9.99□□□□□ -0.81
UBE2F-204ENST00000409953 HSP90AB2PQ58FF8 381 aa9.99□□□□□ -0.81
UBE2F-204ENST00000409953 NOM1Q5C9Z4 860 aaKnown RBP9.99□□□□□ -0.81
UBE2F-204ENST00000409953 USP48Q86UV5 1035 aa9.99□□□□□ -0.81
UBE2F-204ENST00000409953 TMC1Q8TDI8 760 aa9.99□□□□□ -0.81
UBE2F-204ENST00000409953 TTC28Q96AY4 2481 aa9.99□□□□□ -0.81
UBE2F-204ENST00000409953 NCAPD2Q15021 1401 aa9.99□□□□□ -0.81
UBE2F-204ENST00000409953 NPHP1O15259 732 aa9.98□□□□□ -0.81
UBE2F-204ENST00000409953 GSE1Q14687 1217 aa9.98□□□□□ -0.81
UBE2F-204ENST00000409953 TBC1D9BQ66K14 1250 aa9.98□□□□□ -0.81
UBE2F-204ENST00000409953 Q7L0L9 218 aa9.98□□□□□ -0.81
UBE2F-204ENST00000409953 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
UBE2F-204ENST00000409953 TMEM106CQ9BVX2 250 aa9.98□□□□□ -0.81
UBE2F-204ENST00000409953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.98□□□□□ -0.81
UBE2F-204ENST00000409953 TRIM17Q9Y577 477 aa9.98□□□□□ -0.81
UBE2F-204ENST00000409953 A0A1W2PPC1 479 aa9.97□□□□□ -0.81
UBE2F-204ENST00000409953 RASAL3Q86YV0 1011 aa9.97□□□□□ -0.81
UBE2F-204ENST00000409953 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
UBE2F-204ENST00000409953 ANKRD26Q9UPS8 1709 aa9.96□□□□□ -0.81
UBE2F-204ENST00000409953 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.82
UBE2F-204ENST00000409953 CABP4P57796 275 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 ST5P78524 1137 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 OTOP1Q7RTM1 612 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 HOMEZQ8IX15 550 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 DNAJC10Q8IXB1 793 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 TRPM4Q8TD43 1214 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 ARMC5Q96C12 935 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 PSMD1Q99460 953 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 SLC12A5Q9H2X9 1139 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 FLT4P35916 1363 aa9.96□□□□□ -0.82
UBE2F-204ENST00000409953 NPR1P16066 1061 aa9.95□□□□□ -0.82
UBE2F-204ENST00000409953 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
UBE2F-204ENST00000409953 LARGE2Q8N3Y3 721 aa9.95□□□□□ -0.82
UBE2F-204ENST00000409953 DPF3Q92784 378 aa9.95□□□□□ -0.82
UBE2F-204ENST00000409953 TERF2IPQ9NYB0 399 aa9.95□□□□□ -0.82
UBE2F-204ENST00000409953 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
UBE2F-204ENST00000409953 ZBTB1Q9Y2K1 713 aa9.95□□□□□ -0.82
UBE2F-204ENST00000409953 SNED1Q8TER0 1413 aa9.94□□□□□ -0.82
UBE2F-204ENST00000409953 TONSLQ96HA7 1378 aa9.94□□□□□ -0.82
UBE2F-204ENST00000409953 GMPSP49915 693 aaPredicted RBP9.94□□□□□ -0.82
UBE2F-204ENST00000409953 MTMR10Q9NXD2 777 aa9.94□□□□□ -0.82
UBE2F-204ENST00000409953 MRC1P22897 1456 aa9.93□□□□□ -0.82
UBE2F-204ENST00000409953 CYP19A1P11511 503 aaPredicted RBP9.93□□□□□ -0.82
UBE2F-204ENST00000409953 KRT26Q7Z3Y9 468 aa9.93□□□□□ -0.82
UBE2F-204ENST00000409953 NIM1KQ8IY84 436 aa9.93□□□□□ -0.82
UBE2F-204ENST00000409953 RASEFQ8IZ41 740 aa9.93□□□□□ -0.82
UBE2F-204ENST00000409953 PTPN22Q9Y2R2 807 aa9.93□□□□□ -0.82
UBE2F-204ENST00000409953 ADM5C9JUS6 153 aa9.92□□□□□ -0.82
UBE2F-204ENST00000409953 HSP90AB1P08238 724 aaKnown RBP9.92□□□□□ -0.82
UBE2F-204ENST00000409953 SLC4A8Q2Y0W8 1093 aa9.92□□□□□ -0.82
UBE2F-204ENST00000409953 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
UBE2F-204ENST00000409953 R3HDMLQ9H3Y0 253 aa9.92□□□□□ -0.82
UBE2F-204ENST00000409953 SCN7AQ01118 1682 aa9.92□□□□□ -0.82
UBE2F-204ENST00000409953 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
UBE2F-204ENST00000409953 CDHR2Q9BYE9 1310 aa9.91□□□□□ -0.82
UBE2F-204ENST00000409953 TMEM265A0A087WTH1 108 aa9.91□□□□□ -0.82
UBE2F-204ENST00000409953 ZNF333Q96JL9 665 aa9.91□□□□□ -0.82
UBE2F-204ENST00000409953 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
UBE2F-204ENST00000409953 MUC3AQ02505 3323 aa9.91□□□□□ -0.82
UBE2F-204ENST00000409953 WASHC2AQ641Q2 1341 aa9.9□□□□□ -0.82
UBE2F-204ENST00000409953 ECM2O94769 699 aaPredicted RBP9.9□□□□□ -0.82
UBE2F-204ENST00000409953 CANXP27824 592 aaKnown RBP9.9□□□□□ -0.82
UBE2F-204ENST00000409953 BCL2L13Q9BXK5 485 aa9.9□□□□□ -0.82
UBE2F-204ENST00000409953 CFHR5Q9BXR6 569 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms