RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 TNMDQ9H2S6 317 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 TTC41PQ6P2S7 1318 aa12.9□□□□□ -0.34
ITSN1-207ENST00000399338 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.34
ITSN1-207ENST00000399338 GNAI3P08754 354 aa12.9□□□□□ -0.34
ITSN1-207ENST00000399338 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
ITSN1-207ENST00000399338 IQCB1Q15051 598 aa12.9□□□□□ -0.34
ITSN1-207ENST00000399338 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
ITSN1-207ENST00000399338 MSL3Q8N5Y2 521 aaKnown RBP12.9□□□□□ -0.34
ITSN1-207ENST00000399338 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.34
ITSN1-207ENST00000399338 IRX1P78414 480 aaPredicted RBP12.9□□□□□ -0.34
ITSN1-207ENST00000399338 NAIF1Q69YI7 327 aaPredicted RBP12.9□□□□□ -0.34
ITSN1-207ENST00000399338 ARHGAP45Q92619 1136 aa12.9□□□□□ -0.34
ITSN1-207ENST00000399338 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
ITSN1-207ENST00000399338 DNAJC25Q9H1X3 360 aa12.9□□□□□ -0.34
ITSN1-207ENST00000399338 ERCC3P19447 782 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 LONRF2Q1L5Z9 754 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 FAM107BQ9H098 131 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 DNAI1Q9UI46 699 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 ABCA8O94911 1581 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 FANCGO15287 622 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 SRGAP3O43295 1099 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 CAVIN2O95810 425 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 ELF1P32519 619 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
ITSN1-207ENST00000399338 TTC37Q6PGP7 1564 aa12.89□□□□□ -0.35
ITSN1-207ENST00000399338 CLSTN1O94985 981 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 GSDMDP57764 484 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 GNAI1P63096 354 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 TTC19Q6DKK2 380 aaPredicted RBP12.88□□□□□ -0.35
ITSN1-207ENST00000399338 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 RSRC2Q7L4I2 434 aaKnown RBP12.88□□□□□ -0.35
ITSN1-207ENST00000399338 PARD6BQ9BYG5 372 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
ITSN1-207ENST00000399338 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 MCM8Q9UJA3 840 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 ABCC4O15439 1325 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
ITSN1-207ENST00000399338 GIMAP7Q8NHV1 300 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 UPF3BQ9BZI7 483 aaKnown RBP12.88□□□□□ -0.35
ITSN1-207ENST00000399338 GPTP24298 496 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 CLSTN2Q9H4D0 955 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
ITSN1-207ENST00000399338 ERVK-7P63135 1459 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 TRIM65Q6PJ69 517 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 TTC6Q86TZ1 520 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 MORC1Q86VD1 984 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 TATDN2Q93075 761 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 ESYT1Q9BSJ8 1104 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 DACT1Q9NYF0 836 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 MTMR6Q9Y217 621 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 FAN1Q9Y2M0 1017 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 NEBLO76041 1014 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 PAX7P23759 505 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 DDR1Q08345 913 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 SCRN1Q12765 414 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 NEDD9Q14511 834 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 FBXW10Q5XX13 1052 aa12.87□□□□□ -0.35
ITSN1-207ENST00000399338 ZNF777Q9ULD5 760 aaPredicted RBP12.87□□□□□ -0.35
ITSN1-207ENST00000399338 CCDC151A5D8V7 595 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
ITSN1-207ENST00000399338 DDX19AQ9NUU7 478 aaKnown RBP12.86□□□□□ -0.35
ITSN1-207ENST00000399338 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 EXOC5O00471 708 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
ITSN1-207ENST00000399338 TEX11Q8IYF3 940 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 PLEKHA4Q9H4M7 779 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 FANCAO15360 1455 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
ITSN1-207ENST00000399338 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
ITSN1-207ENST00000399338 GCFC2P16383 781 aaKnown RBP12.86□□□□□ -0.35
ITSN1-207ENST00000399338 MTHFSP49914 203 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 LIG3P49916 1009 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 TBC1D8BQ0IIM8 1120 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 JAKMIP3Q5VZ66 844 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 OTUD6BQ8N6M0 293 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
ITSN1-207ENST00000399338 SSH2Q76I76 1423 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 BRD3Q15059 726 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 VPS53Q5VIR6 699 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
ITSN1-207ENST00000399338 RABGGTAQ92696 567 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 SLC24A3Q9HC58 644 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 IMPACTQ9P2X3 320 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 URI1O94763 535 aaPredicted RBP12.85□□□□□ -0.35
ITSN1-207ENST00000399338 FMNL3Q8IVF7 1028 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 HNRNPLLQ8WVV9 542 aaKnown RBP12.85□□□□□ -0.35
ITSN1-207ENST00000399338 OSBPL3Q9H4L5 887 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 VEZTQ9HBM0 779 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
ITSN1-207ENST00000399338 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
ITSN1-207ENST00000399338 CNNM3Q8NE01 707 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 BICC1Q9H694 974 aaKnown RBP12.84□□□□□ -0.35
ITSN1-207ENST00000399338 UNC13BO14795 1591 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms