RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 EPS15P42566 896 aa14.47□□□□□ -0.09
SOCS6-201ENST00000397942 CCDC66A2RUB6 948 aa14.47□□□□□ -0.09
SOCS6-201ENST00000397942 NOLC1Q14978 699 aaKnown RBP eCLIP14.47□□□□□ -0.09
SOCS6-201ENST00000397942 DDX21Q9NR30 783 aaKnown RBP eCLIP14.47□□□□□ -0.09
SOCS6-201ENST00000397942 ANKRD18BA2A2Z9 1011 aa14.47□□□□□ -0.09
SOCS6-201ENST00000397942 CADPS2Q86UW7 1296 aa14.47□□□□□ -0.09
SOCS6-201ENST00000397942 SLC12A7Q9Y666 1083 aa14.47□□□□□ -0.09
SOCS6-201ENST00000397942 NUTM2BA6NNL0 878 aaPredicted RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 NUTM2EB1AL46 878 aaPredicted RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 NBPF7P0C2Y1 421 aaPredicted RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 NUTM2AQ8IVF1 878 aaPredicted RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 ERCC4Q92889 916 aaPredicted RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 TOP1P11387 765 aaKnown RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 IQCA1Q86XH1 822 aa14.46□□□□□ -0.09
SOCS6-201ENST00000397942 CNNM3Q8NE01 707 aa14.46□□□□□ -0.09
SOCS6-201ENST00000397942 NMIQ13287 307 aaPredicted RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 HSP90AB3PQ58FF7 597 aa14.46□□□□□ -0.09
SOCS6-201ENST00000397942 ISM2Q6H9L7 571 aa14.46□□□□□ -0.09
SOCS6-201ENST00000397942 RRAGDQ9NQL2 400 aaPredicted RBP14.46□□□□□ -0.09
SOCS6-201ENST00000397942 KLF18A0A0U1RQI7 1052 aa14.46□□□□□ -0.1
SOCS6-201ENST00000397942 RANBP6O60518 1105 aaKnown RBP14.46□□□□□ -0.1
SOCS6-201ENST00000397942 MCMDC2Q4G0Z9 681 aa14.46□□□□□ -0.1
SOCS6-201ENST00000397942 SOGA3Q5TF21 947 aa14.46□□□□□ -0.1
SOCS6-201ENST00000397942 DTNBO60941 627 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 FAM173BQ6P4H8 233 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 EPB41L2O43491 1005 aaKnown RBP14.45□□□□□ -0.1
SOCS6-201ENST00000397942 NEMFO60524 1076 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
SOCS6-201ENST00000397942 GOLGA8AA7E2F4 631 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
SOCS6-201ENST00000397942 CREB3L3Q68CJ9 461 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 CFAP65Q6ZU64 1925 aaKnown RBP14.45□□□□□ -0.1
SOCS6-201ENST00000397942 CBX1P83916 185 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 HS1BP3Q53T59 392 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 NCOA7Q8NI08 942 aa14.45□□□□□ -0.1
SOCS6-201ENST00000397942 IL15P40933 162 aaPredicted RBP14.44□□□□□ -0.1
SOCS6-201ENST00000397942 SGSM2O43147 1006 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 HOXC9P31274 260 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 AK7Q96M32 723 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 ZHX3Q9H4I2 956 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 STX1AQ16623 288 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 CCDC144CPQ8IYA2 1237 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 RBSNQ9H1K0 784 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 KRT18P05783 430 aaKnown RBP14.44□□□□□ -0.1
SOCS6-201ENST00000397942 CTDP1Q9Y5B0 961 aaPredicted RBP14.44□□□□□ -0.1
SOCS6-201ENST00000397942 MSH6P52701 1360 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 CEP131Q9UPN4 1083 aa14.44□□□□□ -0.1
SOCS6-201ENST00000397942 DYNC1I1O14576 645 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 ANO6Q4KMQ2 910 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 CCDC102BQ68D86 513 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 Q6ZUG5 572 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 PRIMPOLQ96LW4 560 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 DEF6Q9H4E7 631 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 CCDC171Q6TFL3 1326 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 TMEM67Q5HYA8 995 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 AXDND1Q5T1B0 1012 aaPredicted RBP14.43□□□□□ -0.1
SOCS6-201ENST00000397942 DNAJC25Q9H1X3 360 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
SOCS6-201ENST00000397942 ATP2B3Q16720 1220 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 IP6K1Q92551 441 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 RNF41Q9H4P4 317 aaPredicted RBP14.43□□□□□ -0.1
SOCS6-201ENST00000397942 EIF5P55010 431 aaKnown RBP14.43□□□□□ -0.1
SOCS6-201ENST00000397942 USP44Q9H0E7 712 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 LGR6Q9HBX8 967 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 ABCC2Q92887 1545 aa14.43□□□□□ -0.1
SOCS6-201ENST00000397942 ZSCAN12O43309 604 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 GSDMDP57764 484 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 NOM1Q5C9Z4 860 aaKnown RBP14.42□□□□□ -0.1
SOCS6-201ENST00000397942 TEX13AQ9BXU3 409 aaPredicted RBP14.42□□□□□ -0.1
SOCS6-201ENST00000397942 TIMM10P62072 90 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 CAVIN4Q5BKX8 364 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 CABLES1Q8TDN4 633 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 SKIDA1Q1XH10 827 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 TMCO3Q6UWJ1 677 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 TMC6Q7Z403 805 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 ABCC1P33527 1531 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 MAP3K5Q99683 1374 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 ERLIN1O75477 346 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 TYRO3Q06418 890 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 CPLX3Q8WVH0 158 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 KDM6BO15054 1643 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 ZMYM3Q14202 1370 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 EXOC5O00471 708 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 GSPT1P15170 499 aaKnown RBP14.42□□□□□ -0.1
SOCS6-201ENST00000397942 METAP2P50579 478 aaKnown RBP eCLIP14.42□□□□□ -0.1
SOCS6-201ENST00000397942 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
SOCS6-201ENST00000397942 SKILP12757 684 aa14.41□□□□□ -0.1
SOCS6-201ENST00000397942 CHST3Q7LGC8 479 aa14.41□□□□□ -0.1
SOCS6-201ENST00000397942 BMP2KQ9NSY1 1161 aaPredicted RBP14.41□□□□□ -0.1
SOCS6-201ENST00000397942 SLC5A1P13866 664 aa14.41□□□□□ -0.1
SOCS6-201ENST00000397942 CT47A1Q5JQC4 288 aaPredicted RBP14.41□□□□□ -0.1
SOCS6-201ENST00000397942 PLEKHG3A1L390 1219 aa14.41□□□□□ -0.1
SOCS6-201ENST00000397942 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
SOCS6-201ENST00000397942 MKNK2Q9HBH9 465 aa14.41□□□□□ -0.1
SOCS6-201ENST00000397942 SLC9C2Q5TAH2 1124 aa14.4□□□□□ -0.1
SOCS6-201ENST00000397942 MRPS27Q92552 414 aaKnown RBP14.4□□□□□ -0.1
SOCS6-201ENST00000397942 ABCC4O15439 1325 aa14.4□□□□□ -0.1
SOCS6-201ENST00000397942 EDC4Q6P2E9 1401 aaKnown RBP14.4□□□□□ -0.1
SOCS6-201ENST00000397942 DHX32Q7L7V1 743 aaKnown RBP14.4□□□□□ -0.1
SOCS6-201ENST00000397942 TANGO6Q9C0B7 1094 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms