RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
RPA3-202ENST00000396682 PSMD1Q99460 953 aa17.53■□□□□ 0.4
RPA3-202ENST00000396682 ERBB4Q15303 1308 aa17.52■□□□□ 0.4
RPA3-202ENST00000396682 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.4
RPA3-202ENST00000396682 PDIA6Q15084 440 aa17.52■□□□□ 0.4
RPA3-202ENST00000396682 TNS4Q8IZW8 715 aa17.52■□□□□ 0.4
RPA3-202ENST00000396682 HACL1Q9UJ83 578 aa17.52■□□□□ 0.4
RPA3-202ENST00000396682 EPHX2P34913 555 aa17.51■□□□□ 0.39
RPA3-202ENST00000396682 EAPPQ56P03 285 aaPredicted RBP17.51■□□□□ 0.39
RPA3-202ENST00000396682 GIGYF2Q6Y7W6 1299 aaKnown RBP17.51■□□□□ 0.39
RPA3-202ENST00000396682 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
RPA3-202ENST00000396682 PNNQ9H307 717 aaKnown RBP17.51■□□□□ 0.39
RPA3-202ENST00000396682 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
RPA3-202ENST00000396682 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
RPA3-202ENST00000396682 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
RPA3-202ENST00000396682 PROSER3Q2NL68 480 aa17.5■□□□□ 0.39
RPA3-202ENST00000396682 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
RPA3-202ENST00000396682 GPC2Q8N158 579 aa17.5■□□□□ 0.39
RPA3-202ENST00000396682 RIPK4P57078 832 aa17.49■□□□□ 0.39
RPA3-202ENST00000396682 CRAMP1Q96RY5 1269 aa17.49■□□□□ 0.39
RPA3-202ENST00000396682 PPEF1O14829 653 aaPredicted RBP17.48■□□□□ 0.39
RPA3-202ENST00000396682 ANXA1P04083 346 aa17.48■□□□□ 0.39
RPA3-202ENST00000396682 EIF2S2P20042 333 aaKnown RBP17.48■□□□□ 0.39
RPA3-202ENST00000396682 JDP2Q8WYK2 163 aa17.48■□□□□ 0.39
RPA3-202ENST00000396682 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
RPA3-202ENST00000396682 CAPN15O75808 1086 aa17.47■□□□□ 0.39
RPA3-202ENST00000396682 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
RPA3-202ENST00000396682 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
RPA3-202ENST00000396682 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
RPA3-202ENST00000396682 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
RPA3-202ENST00000396682 ANKRD36CQ5JPF3 1778 aa17.46■□□□□ 0.39
RPA3-202ENST00000396682 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
RPA3-202ENST00000396682 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
RPA3-202ENST00000396682 PPP1R42Q7Z4L9 355 aa17.46■□□□□ 0.39
RPA3-202ENST00000396682 PNMA8AQ86V59 439 aaPredicted RBP17.46■□□□□ 0.39
RPA3-202ENST00000396682 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
RPA3-202ENST00000396682 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
RPA3-202ENST00000396682 VEGFBP49765 207 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 SCNN1DP51172 638 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
RPA3-202ENST00000396682 RALBP1Q15311 655 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 GRIPAP1Q4V328 841 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 LARGE2Q8N3Y3 721 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 LAMB2P55268 1798 aa17.45■□□□□ 0.38
RPA3-202ENST00000396682 FOXN1O15353 648 aa17.44■□□□□ 0.38
RPA3-202ENST00000396682 NLRP3Q96P20 1036 aa17.44■□□□□ 0.38
RPA3-202ENST00000396682 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
RPA3-202ENST00000396682 ABCC4O15439 1325 aa17.44■□□□□ 0.38
RPA3-202ENST00000396682 EPS15P42566 896 aa17.43■□□□□ 0.38
RPA3-202ENST00000396682 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
RPA3-202ENST00000396682 COPS6Q7L5N1 327 aa17.43■□□□□ 0.38
RPA3-202ENST00000396682 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
RPA3-202ENST00000396682 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
RPA3-202ENST00000396682 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
RPA3-202ENST00000396682 CCDC146Q8IYE0 955 aa17.42■□□□□ 0.38
RPA3-202ENST00000396682 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
RPA3-202ENST00000396682 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
RPA3-202ENST00000396682 PPIP5K2O43314 1243 aa17.41■□□□□ 0.38
RPA3-202ENST00000396682 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
RPA3-202ENST00000396682 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
RPA3-202ENST00000396682 AOC3Q16853 763 aa17.41■□□□□ 0.38
RPA3-202ENST00000396682 NIM1KQ8IY84 436 aa17.41■□□□□ 0.38
RPA3-202ENST00000396682 CHL1O00533 1208 aa17.4■□□□□ 0.38
RPA3-202ENST00000396682 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
RPA3-202ENST00000396682 LMOD1P29536 600 aaPredicted RBP17.4■□□□□ 0.38
RPA3-202ENST00000396682 FMR1Q06787 632 aaKnown RBP eCLIP17.4■□□□□ 0.38
RPA3-202ENST00000396682 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
RPA3-202ENST00000396682 RTFDC1Q9BY42 306 aaPredicted RBP17.4■□□□□ 0.38
RPA3-202ENST00000396682 TRIM35Q9UPQ4 493 aa17.4■□□□□ 0.38
RPA3-202ENST00000396682 TAF1P21675 1872 aa17.39■□□□□ 0.38
RPA3-202ENST00000396682 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
RPA3-202ENST00000396682 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
RPA3-202ENST00000396682 DDX21Q9NR30 783 aaKnown RBP eCLIP17.39■□□□□ 0.37
RPA3-202ENST00000396682 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
RPA3-202ENST00000396682 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
RPA3-202ENST00000396682 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
RPA3-202ENST00000396682 VPS33BQ9H267 617 aa17.38■□□□□ 0.37
RPA3-202ENST00000396682 WBP1LQ9NX94 342 aa17.38■□□□□ 0.37
RPA3-202ENST00000396682 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
RPA3-202ENST00000396682 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
RPA3-202ENST00000396682 DUOX1Q9NRD9 1551 aa17.37■□□□□ 0.37
RPA3-202ENST00000396682 BBOX1O75936 387 aa17.37■□□□□ 0.37
RPA3-202ENST00000396682 CXCL9Q07325 125 aa17.37■□□□□ 0.37
RPA3-202ENST00000396682 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
RPA3-202ENST00000396682 USP50Q70EL3 339 aaPredicted RBP17.37■□□□□ 0.37
RPA3-202ENST00000396682 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
RPA3-202ENST00000396682 GPRC5DQ9NZD1 345 aa17.37■□□□□ 0.37
RPA3-202ENST00000396682 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
RPA3-202ENST00000396682 ZNRF3Q9ULT6 936 aa17.37■□□□□ 0.37
RPA3-202ENST00000396682 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
RPA3-202ENST00000396682 LRRC37AA6NMS7 1700 aa17.36■□□□□ 0.37
RPA3-202ENST00000396682 TRAF5O00463 557 aa17.36■□□□□ 0.37
RPA3-202ENST00000396682 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
RPA3-202ENST00000396682 TMX4Q9H1E5 349 aaPredicted RBP17.36■□□□□ 0.37
RPA3-202ENST00000396682 PRDM10Q9NQV6 1147 aa17.36■□□□□ 0.37
RPA3-202ENST00000396682 ABT1Q9ULW3 272 aaKnown RBP17.36■□□□□ 0.37
RPA3-202ENST00000396682 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
RPA3-202ENST00000396682 THSD7BQ9C0I4 1608 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms