RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 LRP10Q7Z4F1 713 aa21.4■■□□□ 1.02
CLTA-203ENST00000396603 NUTM1Q86Y26 1132 aa21.4■■□□□ 1.02
CLTA-203ENST00000396603 GPC2Q8N158 579 aa21.4■■□□□ 1.02
CLTA-203ENST00000396603 JDP2Q8WYK2 163 aa21.4■■□□□ 1.02
CLTA-203ENST00000396603 ZBTB3Q9H5J0 574 aa21.4■■□□□ 1.02
CLTA-203ENST00000396603 HACL1Q9UJ83 578 aa21.4■■□□□ 1.02
CLTA-203ENST00000396603 ZNF541Q9H0D2 1346 aa21.39■■□□□ 1.01
CLTA-203ENST00000396603 NTSR2O95665 410 aa21.39■■□□□ 1.01
CLTA-203ENST00000396603 SUSD4Q5VX71 490 aa21.39■■□□□ 1.01
CLTA-203ENST00000396603 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.01
CLTA-203ENST00000396603 POTEIP0CG38 1075 aa21.38■■□□□ 1.01
CLTA-203ENST00000396603 POTEJP0CG39 1038 aa21.38■■□□□ 1.01
CLTA-203ENST00000396603 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
CLTA-203ENST00000396603 HSP90AB3PQ58FF7 597 aa21.38■■□□□ 1.01
CLTA-203ENST00000396603 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
CLTA-203ENST00000396603 GPTP24298 496 aa21.37■■□□□ 1.01
CLTA-203ENST00000396603 PDIA6Q15084 440 aa21.37■■□□□ 1.01
CLTA-203ENST00000396603 SLC10A5Q5PT55 438 aa21.37■■□□□ 1.01
CLTA-203ENST00000396603 OLFM4Q6UX06 510 aa21.37■■□□□ 1.01
CLTA-203ENST00000396603 ADAMTSL1Q8N6G6 1762 aa21.37■■□□□ 1.01
CLTA-203ENST00000396603 MYBBP1AQ9BQG0 1328 aaKnown RBP21.36■■□□□ 1.01
CLTA-203ENST00000396603 EPHX2P34913 555 aa21.36■■□□□ 1.01
CLTA-203ENST00000396603 NLRP3Q96P20 1036 aa21.36■■□□□ 1.01
CLTA-203ENST00000396603 HSPA1AP0DMV8 641 aaKnown RBP21.35■■□□□ 1.01
CLTA-203ENST00000396603 HSPA1BP0DMV9 641 aaKnown RBP21.35■■□□□ 1.01
CLTA-203ENST00000396603 COL13A1Q5TAT6 717 aaPredicted RBP21.35■■□□□ 1.01
CLTA-203ENST00000396603 CNTNAP1P78357 1384 aa21.35■■□□□ 1.01
CLTA-203ENST00000396603 PPEF1O14829 653 aaPredicted RBP21.34■■□□□ 1.01
CLTA-203ENST00000396603 ITGBL1O95965 494 aaPredicted RBP21.34■■□□□ 1.01
CLTA-203ENST00000396603 EIF6P56537 245 aaKnown RBP21.34■■□□□ 1.01
CLTA-203ENST00000396603 UTP14AQ9BVJ6 771 aaKnown RBP21.34■■□□□ 1.01
CLTA-203ENST00000396603 TMX4Q9H1E5 349 aaPredicted RBP21.34■■□□□ 1.01
CLTA-203ENST00000396603 TMEM88BA6NKF7 163 aa21.32■■□□□ 1
CLTA-203ENST00000396603 HOXB7P09629 217 aa21.32■■□□□ 1
CLTA-203ENST00000396603 EIF2S2P20042 333 aaKnown RBP21.32■■□□□ 1
CLTA-203ENST00000396603 CHL1O00533 1208 aa21.31■■□□□ 1
CLTA-203ENST00000396603 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
CLTA-203ENST00000396603 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
CLTA-203ENST00000396603 DDX21Q9NR30 783 aaKnown RBP eCLIP21.31■■□□□ 1
CLTA-203ENST00000396603 ATP6V0A2Q9Y487 856 aa21.31■■□□□ 1
CLTA-203ENST00000396603 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
CLTA-203ENST00000396603 BBOX1O75936 387 aa21.3■■□□□ 1
CLTA-203ENST00000396603 LMOD1P29536 600 aaPredicted RBP21.3■■□□□ 1
CLTA-203ENST00000396603 LARGE2Q8N3Y3 721 aa21.3■■□□□ 1
CLTA-203ENST00000396603 RUNDC1Q96C34 613 aa21.3■■□□□ 1
CLTA-203ENST00000396603 ANKRD36CQ5JPF3 1778 aa21.29■■□□□ 1
CLTA-203ENST00000396603 PROSER3Q2NL68 480 aa21.29■■□□□ 1
CLTA-203ENST00000396603 COPS6Q7L5N1 327 aa21.29■■□□□ 1
CLTA-203ENST00000396603 TNS4Q8IZW8 715 aa21.29■■□□□ 1
CLTA-203ENST00000396603 RTFDC1Q9BY42 306 aaPredicted RBP21.29■■□□□ 1
CLTA-203ENST00000396603 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
CLTA-203ENST00000396603 COL4A5P29400 1685 aa21.28■■□□□ 1
CLTA-203ENST00000396603 TCIRG1Q13488 830 aa21.28■■□□□ 1
CLTA-203ENST00000396603 TMC4Q7Z404 712 aa21.28■■□□□ 1
CLTA-203ENST00000396603 NLRP10Q86W26 655 aa21.28■■□□□ 1
CLTA-203ENST00000396603 NIM1KQ8IY84 436 aa21.28■■□□□ 1
CLTA-203ENST00000396603 CNTROBQ8N137 903 aa21.28■■□□□ 1
CLTA-203ENST00000396603 CLEC11AQ9Y240 323 aa21.28■■□□□ 1
CLTA-203ENST00000396603 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
CLTA-203ENST00000396603 C3orf67Q6ZVT6 689 aa21.27■■□□□ 1
CLTA-203ENST00000396603 USP50Q70EL3 339 aaPredicted RBP21.27■■□□□ 1
CLTA-203ENST00000396603 XAGE3Q8WTP9 111 aa21.27■■□□□ 1
CLTA-203ENST00000396603 ABCC4O15439 1325 aa21.27■□□□□ 0.99
CLTA-203ENST00000396603 SH3TC1Q8TE82 1336 aa21.27■□□□□ 0.99
CLTA-203ENST00000396603 RASSF10A6NK89 507 aa21.26■□□□□ 0.99
CLTA-203ENST00000396603 SCNN1DP51172 638 aa21.26■□□□□ 0.99
CLTA-203ENST00000396603 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
CLTA-203ENST00000396603 SP8Q8IXZ3 490 aa21.26■□□□□ 0.99
CLTA-203ENST00000396603 TRIM35Q9UPQ4 493 aa21.26■□□□□ 0.99
CLTA-203ENST00000396603 CDHR2Q9BYE9 1310 aa21.26■□□□□ 0.99
CLTA-203ENST00000396603 PPIP5K2O43314 1243 aa21.25■□□□□ 0.99
CLTA-203ENST00000396603 GJA3Q9Y6H8 435 aa21.25■□□□□ 0.99
CLTA-203ENST00000396603 ANXA1P04083 346 aa21.24■□□□□ 0.99
CLTA-203ENST00000396603 DBF4Q9UBU7 674 aaPredicted RBP21.24■□□□□ 0.99
CLTA-203ENST00000396603 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
CLTA-203ENST00000396603 GRAPQ13588 217 aa21.23■□□□□ 0.99
CLTA-203ENST00000396603 MAP1SQ66K74 1059 aaPredicted RBP21.23■□□□□ 0.99
CLTA-203ENST00000396603 DDX46Q7L014 1031 aaKnown RBP21.23■□□□□ 0.99
CLTA-203ENST00000396603 PLBD2Q8NHP8 589 aa21.23■□□□□ 0.99
CLTA-203ENST00000396603 GRAPLQ8TC17 118 aaPredicted RBP21.23■□□□□ 0.99
CLTA-203ENST00000396603 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
CLTA-203ENST00000396603 ZNRF3Q9ULT6 936 aa21.23■□□□□ 0.99
CLTA-203ENST00000396603 LTBP1Q14766 1721 aa21.22■□□□□ 0.99
CLTA-203ENST00000396603 VEGFBP49765 207 aa21.22■□□□□ 0.99
CLTA-203ENST00000396603 AIMP1Q12904 312 aaKnown RBP21.22■□□□□ 0.99
CLTA-203ENST00000396603 HDGFL1Q5TGJ6 251 aa21.22■□□□□ 0.99
CLTA-203ENST00000396603 DPP8Q6V1X1 898 aaPredicted RBP21.22■□□□□ 0.99
CLTA-203ENST00000396603 CCDC146Q8IYE0 955 aa21.22■□□□□ 0.99
CLTA-203ENST00000396603 PRDM10Q9NQV6 1147 aa21.22■□□□□ 0.99
CLTA-203ENST00000396603 KIAA2012Q0VF49 1180 aa21.21■□□□□ 0.99
CLTA-203ENST00000396603 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
CLTA-203ENST00000396603 AOC3Q16853 763 aa21.21■□□□□ 0.99
CLTA-203ENST00000396603 MPNDQ8N594 471 aa21.21■□□□□ 0.99
CLTA-203ENST00000396603 ADARB2Q9NS39 739 aaKnown RBP21.21■□□□□ 0.99
CLTA-203ENST00000396603 HYPKQ9NX55 129 aa21.21■□□□□ 0.99
CLTA-203ENST00000396603 GPRC5DQ9NZD1 345 aa21.21■□□□□ 0.99
CLTA-203ENST00000396603 CHPF2Q9P2E5 772 aa21.21■□□□□ 0.99
CLTA-203ENST00000396603 EPS15P42566 896 aa21.2■□□□□ 0.98
CLTA-203ENST00000396603 TRIM28Q13263 835 aaKnown RBP21.2■□□□□ 0.98
CLTA-203ENST00000396603 DEFB115Q30KQ5 88 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms