RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
SNRPA1-202ENST00000394082 ZBTB3Q9H5J0 574 aa22.99■■□□□ 1.27
SNRPA1-202ENST00000394082 NTSR2O95665 410 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 POTEIP0CG38 1075 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 POTEJP0CG39 1038 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 TMPOP42166 694 aaKnown RBP22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 GPC2Q8N158 579 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 HACL1Q9UJ83 578 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 RNF123Q5XPI4 1314 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 PASKQ96RG2 1323 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 ZNF541Q9H0D2 1346 aa22.98■■□□□ 1.27
SNRPA1-202ENST00000394082 GPTP24298 496 aa22.97■■□□□ 1.27
SNRPA1-202ENST00000394082 SLC10A5Q5PT55 438 aa22.97■■□□□ 1.27
SNRPA1-202ENST00000394082 PNMA8AQ86V59 439 aaPredicted RBP22.97■■□□□ 1.27
SNRPA1-202ENST00000394082 JDP2Q8WYK2 163 aa22.97■■□□□ 1.27
SNRPA1-202ENST00000394082 RBM17Q96I25 401 aaKnown RBP22.96■■□□□ 1.27
SNRPA1-202ENST00000394082 COL13A1Q5TAT6 717 aaPredicted RBP22.95■■□□□ 1.26
SNRPA1-202ENST00000394082 ADAMTSL1Q8N6G6 1762 aa22.95■■□□□ 1.26
SNRPA1-202ENST00000394082 MYBBP1AQ9BQG0 1328 aaKnown RBP22.94■■□□□ 1.26
SNRPA1-202ENST00000394082 EPHX2P34913 555 aa22.94■■□□□ 1.26
SNRPA1-202ENST00000394082 NLRP3Q96P20 1036 aa22.94■■□□□ 1.26
SNRPA1-202ENST00000394082 VPS33BQ9H267 617 aa22.94■■□□□ 1.26
SNRPA1-202ENST00000394082 ITGBL1O95965 494 aaPredicted RBP22.93■■□□□ 1.26
SNRPA1-202ENST00000394082 HSPA1AP0DMV8 641 aaKnown RBP22.93■■□□□ 1.26
SNRPA1-202ENST00000394082 HSPA1BP0DMV9 641 aaKnown RBP22.93■■□□□ 1.26
SNRPA1-202ENST00000394082 HSP90AB3PQ58FF7 597 aa22.93■■□□□ 1.26
SNRPA1-202ENST00000394082 EIF2S2P20042 333 aaKnown RBP22.92■■□□□ 1.26
SNRPA1-202ENST00000394082 UTP14AQ9BVJ6 771 aaKnown RBP22.92■■□□□ 1.26
SNRPA1-202ENST00000394082 CHL1O00533 1208 aa22.91■■□□□ 1.26
SNRPA1-202ENST00000394082 PPEF1O14829 653 aaPredicted RBP22.91■■□□□ 1.26
SNRPA1-202ENST00000394082 EIF6P56537 245 aaKnown RBP22.91■■□□□ 1.26
SNRPA1-202ENST00000394082 CNTNAP1P78357 1384 aa22.9■■□□□ 1.26
SNRPA1-202ENST00000394082 PROSER3Q2NL68 480 aa22.9■■□□□ 1.26
SNRPA1-202ENST00000394082 DDX21Q9NR30 783 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNRPA1-202ENST00000394082 TMEM88BA6NKF7 163 aa22.89■■□□□ 1.25
SNRPA1-202ENST00000394082 EAPPQ56P03 285 aaPredicted RBP22.89■■□□□ 1.25
SNRPA1-202ENST00000394082 TMX4Q9H1E5 349 aaPredicted RBP22.89■■□□□ 1.25
SNRPA1-202ENST00000394082 ATP6V0A2Q9Y487 856 aa22.89■■□□□ 1.25
SNRPA1-202ENST00000394082 COL4A5P29400 1685 aa22.88■■□□□ 1.25
SNRPA1-202ENST00000394082 HOXB7P09629 217 aa22.88■■□□□ 1.25
SNRPA1-202ENST00000394082 C3orf67Q6ZVT6 689 aa22.88■■□□□ 1.25
SNRPA1-202ENST00000394082 COPS6Q7L5N1 327 aa22.88■■□□□ 1.25
SNRPA1-202ENST00000394082 LARGE2Q8N3Y3 721 aa22.88■■□□□ 1.25
SNRPA1-202ENST00000394082 RUNDC1Q96C34 613 aa22.88■■□□□ 1.25
SNRPA1-202ENST00000394082 ANKRD36CQ5JPF3 1778 aa22.88■■□□□ 1.25
SNRPA1-202ENST00000394082 BBOX1O75936 387 aa22.87■■□□□ 1.25
SNRPA1-202ENST00000394082 TCIRG1Q13488 830 aa22.87■■□□□ 1.25
SNRPA1-202ENST00000394082 NLRP10Q86W26 655 aa22.87■■□□□ 1.25
SNRPA1-202ENST00000394082 RTFDC1Q9BY42 306 aaPredicted RBP22.87■■□□□ 1.25
SNRPA1-202ENST00000394082 MKRN1Q9UHC7 482 aaKnown RBP22.87■■□□□ 1.25
SNRPA1-202ENST00000394082 CNTROBQ8N137 903 aa22.86■■□□□ 1.25
SNRPA1-202ENST00000394082 TRIM35Q9UPQ4 493 aa22.86■■□□□ 1.25
SNRPA1-202ENST00000394082 CLEC11AQ9Y240 323 aa22.86■■□□□ 1.25
SNRPA1-202ENST00000394082 ANXA1P04083 346 aa22.85■■□□□ 1.25
SNRPA1-202ENST00000394082 LMOD1P29536 600 aaPredicted RBP22.85■■□□□ 1.25
SNRPA1-202ENST00000394082 DDX10Q13206 875 aaKnown RBP22.85■■□□□ 1.25
SNRPA1-202ENST00000394082 TNS4Q8IZW8 715 aa22.85■■□□□ 1.25
SNRPA1-202ENST00000394082 SUPT20HQ8NEM7 779 aa22.85■■□□□ 1.25
SNRPA1-202ENST00000394082 XAGE3Q8WTP9 111 aa22.85■■□□□ 1.25
SNRPA1-202ENST00000394082 ABCC4O15439 1325 aa22.84■■□□□ 1.25
SNRPA1-202ENST00000394082 SCNN1DP51172 638 aa22.84■■□□□ 1.25
SNRPA1-202ENST00000394082 SP8Q8IXZ3 490 aa22.84■■□□□ 1.25
SNRPA1-202ENST00000394082 NIM1KQ8IY84 436 aa22.84■■□□□ 1.25
SNRPA1-202ENST00000394082 SH3TC1Q8TE82 1336 aa22.83■■□□□ 1.25
SNRPA1-202ENST00000394082 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.25
SNRPA1-202ENST00000394082 GJA3Q9Y6H8 435 aa22.83■■□□□ 1.25
SNRPA1-202ENST00000394082 RASSF10A6NK89 507 aa22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 PPIP5K2O43314 1243 aa22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 AIMP1Q12904 312 aaKnown RBP22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 USP50Q70EL3 339 aaPredicted RBP22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 TMC4Q7Z404 712 aa22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 LTBP1Q14766 1721 aa22.82■■□□□ 1.24
SNRPA1-202ENST00000394082 MAP1SQ66K74 1059 aaPredicted RBP22.81■■□□□ 1.24
SNRPA1-202ENST00000394082 PLBD2Q8NHP8 589 aa22.81■■□□□ 1.24
SNRPA1-202ENST00000394082 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
SNRPA1-202ENST00000394082 DBF4Q9UBU7 674 aaPredicted RBP22.81■■□□□ 1.24
SNRPA1-202ENST00000394082 TRMT112Q9UI30 125 aaKnown RBP22.81■■□□□ 1.24
SNRPA1-202ENST00000394082 ZNRF3Q9ULT6 936 aa22.81■■□□□ 1.24
SNRPA1-202ENST00000394082 LAMB2P55268 1798 aa22.81■■□□□ 1.24
SNRPA1-202ENST00000394082 DDX46Q7L014 1031 aaKnown RBP22.8■■□□□ 1.24
SNRPA1-202ENST00000394082 NECTIN2Q92692 538 aa22.8■■□□□ 1.24
SNRPA1-202ENST00000394082 CHPF2Q9P2E5 772 aa22.8■■□□□ 1.24
SNRPA1-202ENST00000394082 ADAMTS8Q9UP79 889 aa22.8■■□□□ 1.24
SNRPA1-202ENST00000394082 TCERG1O14776 1098 aaKnown RBP22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 HCLS1P14317 486 aaPredicted RBP22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 EPS15P42566 896 aa22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 VEGFBP49765 207 aa22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 GRAPQ13588 217 aa22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 AOC3Q16853 763 aa22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 KRT24Q2M2I5 525 aa22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 HDGFL1Q5TGJ6 251 aa22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 GRAPLQ8TC17 118 aaPredicted RBP22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 CDHR2Q9BYE9 1310 aa22.79■■□□□ 1.24
SNRPA1-202ENST00000394082 KIAA2012Q0VF49 1180 aa22.78■■□□□ 1.24
SNRPA1-202ENST00000394082 DPP8Q6V1X1 898 aaPredicted RBP22.78■■□□□ 1.24
SNRPA1-202ENST00000394082 ANKRD13DQ6ZTN6 518 aa22.78■■□□□ 1.24
SNRPA1-202ENST00000394082 SLC51AQ86UW1 340 aa22.78■■□□□ 1.24
SNRPA1-202ENST00000394082 MPNDQ8N594 471 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms