RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 SNED1Q8TER0 1413 aa24.5■■□□□ 1.51
SNCB-202ENST00000393693 ITGBL1O95965 494 aaPredicted RBP24.49■■□□□ 1.51
SNCB-202ENST00000393693 EPHX2P34913 555 aa24.49■■□□□ 1.51
SNCB-202ENST00000393693 SCN4AP35499 1836 aa24.49■■□□□ 1.51
SNCB-202ENST00000393693 PSMD1Q99460 953 aa24.48■■□□□ 1.51
SNCB-202ENST00000393693 NUP98P52948 1817 aa24.47■■□□□ 1.51
SNCB-202ENST00000393693 CNTNAP1P78357 1384 aa24.47■■□□□ 1.51
SNCB-202ENST00000393693 TCERG1O14776 1098 aaKnown RBP24.47■■□□□ 1.51
SNCB-202ENST00000393693 C3orf67Q6ZVT6 689 aa24.47■■□□□ 1.51
SNCB-202ENST00000393693 ZNF34Q8IZ26 560 aa24.47■■□□□ 1.51
SNCB-202ENST00000393693 RPGRQ92834 1020 aaKnown RBP24.47■■□□□ 1.51
SNCB-202ENST00000393693 MAPK8IP3Q9UPT6 1336 aa24.46■■□□□ 1.51
SNCB-202ENST00000393693 HOXA10P31260 410 aaPredicted RBP24.46■■□□□ 1.51
SNCB-202ENST00000393693 JDP2Q8WYK2 163 aa24.46■■□□□ 1.51
SNCB-202ENST00000393693 COL4A5P29400 1685 aa24.46■■□□□ 1.51
SNCB-202ENST00000393693 TMEM88BA6NKF7 163 aa24.45■■□□□ 1.5
SNCB-202ENST00000393693 NTSR2O95665 410 aa24.45■■□□□ 1.5
SNCB-202ENST00000393693 MAP1SQ66K74 1059 aaPredicted RBP24.45■■□□□ 1.5
SNCB-202ENST00000393693 GPC2Q8N158 579 aa24.45■■□□□ 1.5
SNCB-202ENST00000393693 PRKRIP1Q9H875 184 aaPredicted RBP24.45■■□□□ 1.5
SNCB-202ENST00000393693 TSPYL4Q9UJ04 414 aa24.45■■□□□ 1.5
SNCB-202ENST00000393693 CC2D2BQ6DHV5 1058 aa24.44■■□□□ 1.5
SNCB-202ENST00000393693 GIGYF2Q6Y7W6 1299 aaKnown RBP24.44■■□□□ 1.5
SNCB-202ENST00000393693 GJA3Q9Y6H8 435 aa24.44■■□□□ 1.5
SNCB-202ENST00000393693 IBTKQ9P2D0 1353 aaPredicted RBP24.43■■□□□ 1.5
SNCB-202ENST00000393693 ANXA1P04083 346 aa24.43■■□□□ 1.5
SNCB-202ENST00000393693 EIF2S2P20042 333 aaKnown RBP24.43■■□□□ 1.5
SNCB-202ENST00000393693 VEGFBP49765 207 aa24.43■■□□□ 1.5
SNCB-202ENST00000393693 LRP10Q7Z4F1 713 aa24.43■■□□□ 1.5
SNCB-202ENST00000393693 CNTROBQ8N137 903 aa24.43■■□□□ 1.5
SNCB-202ENST00000393693 RBM17Q96I25 401 aaKnown RBP24.43■■□□□ 1.5
SNCB-202ENST00000393693 PNNQ9H307 717 aaKnown RBP24.43■■□□□ 1.5
SNCB-202ENST00000393693 ADAMTSL1Q8N6G6 1762 aa24.42■■□□□ 1.5
SNCB-202ENST00000393693 FOXN1O15353 648 aa24.42■■□□□ 1.5
SNCB-202ENST00000393693 PDIA6Q15084 440 aa24.42■■□□□ 1.5
SNCB-202ENST00000393693 PROSER3Q2NL68 480 aa24.42■■□□□ 1.5
SNCB-202ENST00000393693 PNMA8AQ86V59 439 aaPredicted RBP24.42■■□□□ 1.5
SNCB-202ENST00000393693 CRAMP1Q96RY5 1269 aa24.42■■□□□ 1.5
SNCB-202ENST00000393693 RIC1Q4ADV7 1423 aa24.42■■□□□ 1.5
SNCB-202ENST00000393693 ERBB4Q15303 1308 aa24.41■■□□□ 1.5
SNCB-202ENST00000393693 PPEF1O14829 653 aaPredicted RBP24.41■■□□□ 1.5
SNCB-202ENST00000393693 EIF6P56537 245 aaKnown RBP24.41■■□□□ 1.5
SNCB-202ENST00000393693 RIPK4P57078 832 aa24.41■■□□□ 1.5
SNCB-202ENST00000393693 PPP1R42Q7Z4L9 355 aa24.4■■□□□ 1.5
SNCB-202ENST00000393693 LARGE2Q8N3Y3 721 aa24.4■■□□□ 1.5
SNCB-202ENST00000393693 RALBP1Q15311 655 aa24.39■■□□□ 1.49
SNCB-202ENST00000393693 EPS15P42566 896 aa24.38■■□□□ 1.49
SNCB-202ENST00000393693 PARP10Q53GL7 1025 aa24.38■■□□□ 1.49
SNCB-202ENST00000393693 NECTIN2Q92692 538 aa24.38■■□□□ 1.49
SNCB-202ENST00000393693 NLRP3Q96P20 1036 aa24.38■■□□□ 1.49
SNCB-202ENST00000393693 SCNN1DP51172 638 aa24.37■■□□□ 1.49
SNCB-202ENST00000393693 UTP14AQ9BVJ6 771 aaKnown RBP24.37■■□□□ 1.49
SNCB-202ENST00000393693 LTBP1Q14766 1721 aa24.37■■□□□ 1.49
SNCB-202ENST00000393693 LMOD1P29536 600 aaPredicted RBP24.36■■□□□ 1.49
SNCB-202ENST00000393693 FMR1Q06787 632 aaKnown RBP eCLIP24.36■■□□□ 1.49
SNCB-202ENST00000393693 GRIPAP1Q4V328 841 aa24.36■■□□□ 1.49
SNCB-202ENST00000393693 TMPOP42166 694 aaKnown RBP24.35■■□□□ 1.49
SNCB-202ENST00000393693 AIMP1Q12904 312 aaKnown RBP24.35■■□□□ 1.49
SNCB-202ENST00000393693 SLC10A5Q5PT55 438 aa24.35■■□□□ 1.49
SNCB-202ENST00000393693 RASSF10A6NK89 507 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 PPIP5K2O43314 1243 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 AOC3Q16853 763 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 DEFB115Q30KQ5 88 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 COPS6Q7L5N1 327 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 NIM1KQ8IY84 436 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 ATP6V0A2Q9Y487 856 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 ABCC4O15439 1325 aa24.34■■□□□ 1.49
SNCB-202ENST00000393693 XAGE3Q8WTP9 111 aa24.33■■□□□ 1.49
SNCB-202ENST00000393693 DDX21Q9NR30 783 aaKnown RBP eCLIP24.33■■□□□ 1.49
SNCB-202ENST00000393693 HCLS1P14317 486 aaPredicted RBP24.32■■□□□ 1.48
SNCB-202ENST00000393693 NEUROD2Q15784 382 aa24.32■■□□□ 1.48
SNCB-202ENST00000393693 KRT24Q2M2I5 525 aa24.32■■□□□ 1.48
SNCB-202ENST00000393693 ZNF428Q96B54 188 aa24.32■■□□□ 1.48
SNCB-202ENST00000393693 AIDAQ96BJ3 306 aa24.32■■□□□ 1.48
SNCB-202ENST00000393693 BABAM1Q9NWV8 329 aa24.32■■□□□ 1.48
SNCB-202ENST00000393693 WBP1LQ9NX94 342 aa24.32■■□□□ 1.48
SNCB-202ENST00000393693 ABT1Q9ULW3 272 aaKnown RBP24.32■■□□□ 1.48
SNCB-202ENST00000393693 NLRP10Q86W26 655 aa24.31■■□□□ 1.48
SNCB-202ENST00000393693 CCDC146Q8IYE0 955 aa24.31■■□□□ 1.48
SNCB-202ENST00000393693 CTCFP49711 727 aaPredicted RBP24.3■■□□□ 1.48
SNCB-202ENST00000393693 TMX4Q9H1E5 349 aaPredicted RBP24.3■■□□□ 1.48
SNCB-202ENST00000393693 PRDM10Q9NQV6 1147 aa24.3■■□□□ 1.48
SNCB-202ENST00000393693 WDR33Q9C0J8 1336 aaKnown RBP24.3■■□□□ 1.48
SNCB-202ENST00000393693 LMOD3Q0VAK6 560 aa24.29■■□□□ 1.48
SNCB-202ENST00000393693 TRAF5O00463 557 aa24.28■■□□□ 1.48
SNCB-202ENST00000393693 LBX1P52954 281 aa24.28■■□□□ 1.48
SNCB-202ENST00000393693 CXCL9Q07325 125 aa24.28■■□□□ 1.48
SNCB-202ENST00000393693 TCIRG1Q13488 830 aa24.28■■□□□ 1.48
SNCB-202ENST00000393693 HSP90AB3PQ58FF7 597 aa24.28■■□□□ 1.48
SNCB-202ENST00000393693 USP50Q70EL3 339 aaPredicted RBP24.28■■□□□ 1.48
SNCB-202ENST00000393693 MYBBP1AQ9BQG0 1328 aaKnown RBP24.28■■□□□ 1.48
SNCB-202ENST00000393693 DPP8Q6V1X1 898 aaPredicted RBP24.27■■□□□ 1.48
SNCB-202ENST00000393693 SP8Q8IXZ3 490 aa24.27■■□□□ 1.48
SNCB-202ENST00000393693 RTFDC1Q9BY42 306 aaPredicted RBP24.27■■□□□ 1.48
SNCB-202ENST00000393693 TRMT112Q9UI30 125 aaKnown RBP24.27■■□□□ 1.48
SNCB-202ENST00000393693 ZNRF3Q9ULT6 936 aa24.27■■□□□ 1.48
SNCB-202ENST00000393693 LAS1LQ9Y4W2 734 aaKnown RBP24.27■■□□□ 1.48
SNCB-202ENST00000393693 CHL1O00533 1208 aa24.26■■□□□ 1.47
SNCB-202ENST00000393693 BBOX1O75936 387 aa24.26■■□□□ 1.47
SNCB-202ENST00000393693 MPNDQ8N594 471 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms