RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 JAK2O60674 1132 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 IFIT2P09913 472 aaKnown RBP21.46■■□□□ 1.03
ERCC2-201ENST00000391941 TYRO3Q06418 890 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 CREB3L3Q68CJ9 461 aa21.46■■□□□ 1.03
ERCC2-201ENST00000391941 ERCC4Q92889 916 aaPredicted RBP21.46■■□□□ 1.03
ERCC2-201ENST00000391941 HMGN5P82970 282 aaKnown RBP21.45■■□□□ 1.02
ERCC2-201ENST00000391941 CLASRPQ8N2M8 674 aaKnown RBP21.45■■□□□ 1.02
ERCC2-201ENST00000391941 C9orf78Q9NZ63 289 aaPredicted RBP21.45■■□□□ 1.02
ERCC2-201ENST00000391941 CCDC192P0DO97 292 aa21.45■■□□□ 1.02
ERCC2-201ENST00000391941 FTOQ9C0B1 505 aaKnown RBP eCLIP21.44■■□□□ 1.02
ERCC2-201ENST00000391941 MAP3K2Q9Y2U5 619 aa21.44■■□□□ 1.02
ERCC2-201ENST00000391941 ATP6V1DQ9Y5K8 247 aa21.44■■□□□ 1.02
ERCC2-201ENST00000391941 FMN2Q9NZ56 1722 aa21.44■■□□□ 1.02
ERCC2-201ENST00000391941 GLRX3O76003 335 aaKnown RBP21.44■■□□□ 1.02
ERCC2-201ENST00000391941 SMAP1Q8IYB5 467 aaPredicted RBP21.44■■□□□ 1.02
ERCC2-201ENST00000391941 NUP62CLQ9H1M0 184 aa21.44■■□□□ 1.02
ERCC2-201ENST00000391941 ZSWIM6Q9HCJ5 1215 aa21.44■■□□□ 1.02
ERCC2-201ENST00000391941 TNRQ92752 1358 aa21.44■■□□□ 1.02
ERCC2-201ENST00000391941 PXDNLA1KZ92 1463 aa21.44■■□□□ 1.02
ERCC2-201ENST00000391941 NR1I2O75469 434 aa21.43■■□□□ 1.02
ERCC2-201ENST00000391941 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
ERCC2-201ENST00000391941 ZNF592Q92610 1267 aa21.43■■□□□ 1.02
ERCC2-201ENST00000391941 DNAJC25Q9H1X3 360 aa21.43■■□□□ 1.02
ERCC2-201ENST00000391941 CBX8Q9HC52 389 aa21.43■■□□□ 1.02
ERCC2-201ENST00000391941 EIF4A1P60842 406 aaKnown RBP21.43■■□□□ 1.02
ERCC2-201ENST00000391941 NECTIN1Q15223 517 aa21.43■■□□□ 1.02
ERCC2-201ENST00000391941 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
ERCC2-201ENST00000391941 ECHDC1Q9NTX5 307 aa21.43■■□□□ 1.02
ERCC2-201ENST00000391941 SLFNL1Q499Z3 407 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 VPS53Q5VIR6 699 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 EAF2Q96CJ1 260 aaPredicted RBP21.42■■□□□ 1.02
ERCC2-201ENST00000391941 PTPRUQ92729 1446 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 PIP4K2AP48426 406 aaPredicted RBP21.42■■□□□ 1.02
ERCC2-201ENST00000391941 MAP3K11Q16584 847 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 NBPF6Q5VWK0 638 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 NBPF4Q96M43 638 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 TRIM5Q9C035 493 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 TNMDQ9H2S6 317 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.42■■□□□ 1.02
ERCC2-201ENST00000391941 V9GYY5 206 aaPredicted RBP21.42■■□□□ 1.02
ERCC2-201ENST00000391941 CCDC171Q6TFL3 1326 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 LRRC37A3O60309 1634 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 ADCY9O60503 1353 aa21.42■■□□□ 1.02
ERCC2-201ENST00000391941 SLC27A2O14975 620 aa21.41■■□□□ 1.02
ERCC2-201ENST00000391941 GOLGA6L4A6NEF3 574 aa21.4■■□□□ 1.02
ERCC2-201ENST00000391941 CCDC144BQ3MJ40 725 aa21.4■■□□□ 1.02
ERCC2-201ENST00000391941 CCDC129Q6ZRS4 1044 aa21.4■■□□□ 1.02
ERCC2-201ENST00000391941 CCDC144CPQ8IYA2 1237 aa21.4■■□□□ 1.02
ERCC2-201ENST00000391941 KRT85P78386 507 aa21.4■■□□□ 1.02
ERCC2-201ENST00000391941 TAOK2Q9UL54 1235 aa21.4■■□□□ 1.02
ERCC2-201ENST00000391941 SASH1O94885 1247 aa21.39■■□□□ 1.02
ERCC2-201ENST00000391941 ZKSCAN1P17029 563 aaPredicted RBP21.39■■□□□ 1.02
ERCC2-201ENST00000391941 GTF2F1P35269 517 aaKnown RBP eCLIP21.39■■□□□ 1.025e-7■■■■■ 32.9
ERCC2-201ENST00000391941 FAM200AQ8TCP9 573 aa21.39■■□□□ 1.02
ERCC2-201ENST00000391941 BICD2Q8TD16 824 aa21.39■■□□□ 1.02
ERCC2-201ENST00000391941 SPATA32Q96LK8 384 aa21.39■■□□□ 1.02
ERCC2-201ENST00000391941 FSD1Q9BTV5 496 aa21.39■■□□□ 1.01
ERCC2-201ENST00000391941 BTBD11A6QL63 1104 aa21.38■■□□□ 1.01
ERCC2-201ENST00000391941 SYTL4Q96C24 671 aaPredicted RBP21.38■■□□□ 1.01
ERCC2-201ENST00000391941 PGBD1Q96JS3 809 aa21.38■■□□□ 1.01
ERCC2-201ENST00000391941 SUCLG2Q96I99 432 aa21.38■■□□□ 1.01
ERCC2-201ENST00000391941 SEC62Q99442 399 aaKnown RBP21.38■■□□□ 1.01
ERCC2-201ENST00000391941 KLHL34Q8N239 644 aa21.38■■□□□ 1.01
ERCC2-201ENST00000391941 USP27XA6NNY8 438 aa21.37■■□□□ 1.01
ERCC2-201ENST00000391941 DMTNQ08495 405 aa21.37■■□□□ 1.01
ERCC2-201ENST00000391941 TOB2Q14106 344 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-201ENST00000391941 BICC1Q9H694 974 aaKnown RBP21.37■■□□□ 1.01
ERCC2-201ENST00000391941 BABAM1Q9NWV8 329 aa21.37■■□□□ 1.01
ERCC2-201ENST00000391941 TTC41PQ6P2S7 1318 aa21.37■■□□□ 1.01
ERCC2-201ENST00000391941 CHAF1AQ13111 956 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-201ENST00000391941 RUFY2Q8WXA3 655 aa21.37■■□□□ 1.01
ERCC2-201ENST00000391941 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
ERCC2-201ENST00000391941 CACTINQ8WUQ7 758 aaKnown RBP21.36■■□□□ 1.01
ERCC2-201ENST00000391941 KAZALD1Q96I82 304 aa21.36■■□□□ 1.01
ERCC2-201ENST00000391941 USP42Q9H9J4 1324 aaKnown RBP21.36■■□□□ 1.01
ERCC2-201ENST00000391941 TEFQ10587 303 aa21.36■■□□□ 1.01
ERCC2-201ENST00000391941 BLOC1S2Q6QNY1 142 aa21.36■■□□□ 1.01
ERCC2-201ENST00000391941 LEO1Q8WVC0 666 aaPredicted RBP21.36■■□□□ 1.01
ERCC2-201ENST00000391941 USP16Q9Y5T5 823 aa21.36■■□□□ 1.01
ERCC2-201ENST00000391941 NWD1Q149M9 1564 aa21.36■■□□□ 1.01
ERCC2-201ENST00000391941 RGPD8O14715 1765 aaPredicted RBP21.36■■□□□ 1.01
ERCC2-201ENST00000391941 SH2B1Q9NRF2 756 aaPredicted RBP21.35■■□□□ 1.01
ERCC2-201ENST00000391941 NPHP1O15259 732 aa21.35■■□□□ 1.01
ERCC2-201ENST00000391941 ZSCAN31Q96LW9 406 aaPredicted RBP21.35■■□□□ 1.01
ERCC2-201ENST00000391941 NCBP1Q09161 790 aaKnown RBP21.34■■□□□ 1.01
ERCC2-201ENST00000391941 PLEKHG1Q9ULL1 1385 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 GUCY1B3Q02153 619 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 ZSCAN25Q6NSZ9 544 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 ZNF530Q6P9A1 599 aaPredicted RBP21.34■■□□□ 1.01
ERCC2-201ENST00000391941 MAP4K1Q92918 833 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 N4BP2Q86UW6 1770 aaPredicted RBP21.34■■□□□ 1.01
ERCC2-201ENST00000391941 TNNT1P13805 278 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 ZNF165P49910 485 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 EVI5LQ96CN4 794 aa21.34■■□□□ 1.01
ERCC2-201ENST00000391941 TRMT1Q9NXH9 659 aaKnown RBP21.34■■□□□ 1.01
ERCC2-201ENST00000391941 PIK3C2AO00443 1686 aa21.33■■□□□ 1.01
ERCC2-201ENST00000391941 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
ERCC2-201ENST00000391941 A0A0G2JLW4 131 aa21.33■■□□□ 1.01
ERCC2-201ENST00000391941 MYL6BP14649 208 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms