RNA–Protein interactions for RNA: ENST00000390625.3

IGHV3-49-201, Transcript of immunoglobulin heavy variable 3-49, humanhuman

APPRIS P1 BASIC

Gene IGHV3-49, Length 439 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49-201ENST00000390625 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
IGHV3-49-201ENST00000390625 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
IGHV3-49-201ENST00000390625 GRM1Q13255 1194 aa18.32■□□□□ 0.52
IGHV3-49-201ENST00000390625 CYP4F22Q6NT55 531 aa18.32■□□□□ 0.52
IGHV3-49-201ENST00000390625 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
IGHV3-49-201ENST00000390625 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
IGHV3-49-201ENST00000390625 ABT1Q9ULW3 272 aaKnown RBP18.32■□□□□ 0.52
IGHV3-49-201ENST00000390625 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
IGHV3-49-201ENST00000390625 TAF1P21675 1872 aa18.31■□□□□ 0.52
IGHV3-49-201ENST00000390625 FAM161AQ3B820 660 aa18.31■□□□□ 0.52
IGHV3-49-201ENST00000390625 CRY2Q49AN0 593 aa18.31■□□□□ 0.52
IGHV3-49-201ENST00000390625 CST9Q5W186 159 aa18.31■□□□□ 0.52
IGHV3-49-201ENST00000390625 GPC2Q8N158 579 aa18.31■□□□□ 0.52
IGHV3-49-201ENST00000390625 AOC2O75106 756 aa18.3■□□□□ 0.52
IGHV3-49-201ENST00000390625 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
IGHV3-49-201ENST00000390625 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
IGHV3-49-201ENST00000390625 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
IGHV3-49-201ENST00000390625 ALDH1B1P30837 517 aa18.29■□□□□ 0.52
IGHV3-49-201ENST00000390625 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
IGHV3-49-201ENST00000390625 PSMD1Q99460 953 aa18.29■□□□□ 0.52
IGHV3-49-201ENST00000390625 ZBTB3Q9H5J0 574 aa18.29■□□□□ 0.52
IGHV3-49-201ENST00000390625 CASP8AP2Q9UKL3 1982 aa18.29■□□□□ 0.52
IGHV3-49-201ENST00000390625 MYL6BP14649 208 aa18.28■□□□□ 0.52
IGHV3-49-201ENST00000390625 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
IGHV3-49-201ENST00000390625 PNMA8AQ86V59 439 aaPredicted RBP18.28■□□□□ 0.52
IGHV3-49-201ENST00000390625 CAPNS2Q96L46 248 aa18.28■□□□□ 0.52
IGHV3-49-201ENST00000390625 LAMB2P55268 1798 aa18.27■□□□□ 0.52
IGHV3-49-201ENST00000390625 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
IGHV3-49-201ENST00000390625 DLK2Q6UY11 383 aa18.27■□□□□ 0.52
IGHV3-49-201ENST00000390625 PAXIP1Q6ZW49 1069 aaPredicted RBP18.27■□□□□ 0.52
IGHV3-49-201ENST00000390625 ZNF428Q96B54 188 aa18.27■□□□□ 0.52
IGHV3-49-201ENST00000390625 MAP3K15Q6ZN16 1313 aa18.26■□□□□ 0.51
IGHV3-49-201ENST00000390625 SHTN1A0MZ66 631 aa18.26■□□□□ 0.51
IGHV3-49-201ENST00000390625 LARGE2Q8N3Y3 721 aa18.26■□□□□ 0.51
IGHV3-49-201ENST00000390625 JDP2Q8WYK2 163 aa18.26■□□□□ 0.51
IGHV3-49-201ENST00000390625 RIC1Q4ADV7 1423 aa18.25■□□□□ 0.51
IGHV3-49-201ENST00000390625 NTSR2O95665 410 aa18.25■□□□□ 0.51
IGHV3-49-201ENST00000390625 HOXA10P31260 410 aaPredicted RBP18.25■□□□□ 0.51
IGHV3-49-201ENST00000390625 EIF6P56537 245 aaKnown RBP18.25■□□□□ 0.51
IGHV3-49-201ENST00000390625 AOC3Q16853 763 aa18.25■□□□□ 0.51
IGHV3-49-201ENST00000390625 CFAP53Q96M91 514 aa18.25■□□□□ 0.51
IGHV3-49-201ENST00000390625 ANXA1P04083 346 aa18.24■□□□□ 0.51
IGHV3-49-201ENST00000390625 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
IGHV3-49-201ENST00000390625 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
IGHV3-49-201ENST00000390625 GPR101Q96P66 508 aaPredicted RBP18.24■□□□□ 0.51
IGHV3-49-201ENST00000390625 CCDC85CA6NKD9 419 aa18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 RGL2O15211 777 aa18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 ZNF34Q8IZ26 560 aa18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 GLIS2Q9BZE0 524 aaPredicted RBP18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 TNRC18O15417 2968 aaPredicted RBP18.23■□□□□ 0.51
IGHV3-49-201ENST00000390625 COL4A1P02462 1669 aa18.22■□□□□ 0.51
IGHV3-49-201ENST00000390625 ERVV-1B6SEH8 477 aa18.22■□□□□ 0.51
IGHV3-49-201ENST00000390625 LMOD1P29536 600 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-49-201ENST00000390625 MAP2K1Q02750 393 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-49-201ENST00000390625 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
IGHV3-49-201ENST00000390625 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
IGHV3-49-201ENST00000390625 TLL2Q9Y6L7 1015 aa18.22■□□□□ 0.51
IGHV3-49-201ENST00000390625 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
IGHV3-49-201ENST00000390625 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
IGHV3-49-201ENST00000390625 SLC34A2O95436 690 aa18.21■□□□□ 0.51
IGHV3-49-201ENST00000390625 HIRAP54198 1017 aaPredicted RBP18.21■□□□□ 0.51
IGHV3-49-201ENST00000390625 CXCL9Q07325 125 aa18.21■□□□□ 0.51
IGHV3-49-201ENST00000390625 CRAMP1Q96RY5 1269 aa18.21■□□□□ 0.51
IGHV3-49-201ENST00000390625 NYXQ9GZU5 481 aa18.21■□□□□ 0.51
IGHV3-49-201ENST00000390625 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
IGHV3-49-201ENST00000390625 GMPSP49915 693 aaPredicted RBP18.2■□□□□ 0.5
IGHV3-49-201ENST00000390625 GPRC5DQ9NZD1 345 aa18.2■□□□□ 0.5
IGHV3-49-201ENST00000390625 PDIA6Q15084 440 aa18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 CC2D2BQ6DHV5 1058 aa18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 KIF6Q6ZMV9 814 aa18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 USP50Q70EL3 339 aaPredicted RBP18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 NIM1KQ8IY84 436 aa18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 RBM17Q96I25 401 aaKnown RBP18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 ABCC4O15439 1325 aa18.19■□□□□ 0.5
IGHV3-49-201ENST00000390625 RAD17O75943 681 aa18.18■□□□□ 0.5
IGHV3-49-201ENST00000390625 CELF2O95319 508 aaKnown RBP18.18■□□□□ 0.5
IGHV3-49-201ENST00000390625 IBTKQ9P2D0 1353 aaPredicted RBP18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 DUOX1Q9NRD9 1551 aa18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 ANKRD36CQ5JPF3 1778 aa18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 HCLS1P14317 486 aaPredicted RBP18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 GIGYF2Q6Y7W6 1299 aaKnown RBP18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 SAPCD2Q86UD0 394 aa18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
IGHV3-49-201ENST00000390625 YDJCA8MPS7 323 aa18.16■□□□□ 0.5
IGHV3-49-201ENST00000390625 ADARB2Q9NS39 739 aaKnown RBP18.16■□□□□ 0.5
IGHV3-49-201ENST00000390625 EIF2S2P20042 333 aaKnown RBP18.15■□□□□ 0.5
IGHV3-49-201ENST00000390625 ECE1P42892 770 aa18.15■□□□□ 0.5
IGHV3-49-201ENST00000390625 MCOLN1Q9GZU1 580 aa18.15■□□□□ 0.5
IGHV3-49-201ENST00000390625 CIAPIN1Q6FI81 312 aa18.14■□□□□ 0.49
IGHV3-49-201ENST00000390625 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
IGHV3-49-201ENST00000390625 EGFRP00533 1210 aa18.13■□□□□ 0.49
IGHV3-49-201ENST00000390625 NFE2L2Q16236 605 aa18.13■□□□□ 0.49
IGHV3-49-201ENST00000390625 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms