RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 DDX10Q13206 875 aaKnown RBP14.53□□□□□ -0.08
TRAV3-201ENST00000390425 GIGYF2Q6Y7W6 1299 aaKnown RBP14.53□□□□□ -0.08
TRAV3-201ENST00000390425 RTKN2Q8IZC4 609 aa14.53□□□□□ -0.08
TRAV3-201ENST00000390425 EIF2S2P20042 333 aaKnown RBP14.52□□□□□ -0.09
TRAV3-201ENST00000390425 HOXA10P31260 410 aaPredicted RBP14.52□□□□□ -0.09
TRAV3-201ENST00000390425 IARSP41252 1262 aaKnown RBP14.52□□□□□ -0.09
TRAV3-201ENST00000390425 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
TRAV3-201ENST00000390425 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.09
TRAV3-201ENST00000390425 TAF1DQ9H5J8 278 aaPredicted RBP14.52□□□□□ -0.09
TRAV3-201ENST00000390425 BABAM1Q9NWV8 329 aa14.52□□□□□ -0.09
TRAV3-201ENST00000390425 KRT24Q2M2I5 525 aa14.51□□□□□ -0.09
TRAV3-201ENST00000390425 SYNE4Q8N205 404 aa14.51□□□□□ -0.09
TRAV3-201ENST00000390425 PSMD1Q99460 953 aa14.51□□□□□ -0.09
TRAV3-201ENST00000390425 LRRC37AA6NMS7 1700 aa14.51□□□□□ -0.09
TRAV3-201ENST00000390425 PASKQ96RG2 1323 aa14.5□□□□□ -0.09
TRAV3-201ENST00000390425 FZD9O00144 591 aa14.5□□□□□ -0.09
TRAV3-201ENST00000390425 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
TRAV3-201ENST00000390425 TRIM35Q9UPQ4 493 aa14.5□□□□□ -0.09
TRAV3-201ENST00000390425 RNF123Q5XPI4 1314 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 IQCA1LA6NCM1 817 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 PARP10Q53GL7 1025 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 LDHDQ86WU2 507 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 RPGRQ92834 1020 aaKnown RBP14.49□□□□□ -0.09
TRAV3-201ENST00000390425 CRAMP1Q96RY5 1269 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 COL4A1P02462 1669 aa14.49□□□□□ -0.09
TRAV3-201ENST00000390425 DUOX1Q9NRD9 1551 aa14.48□□□□□ -0.09
TRAV3-201ENST00000390425 CHL1O00533 1208 aa14.48□□□□□ -0.09
TRAV3-201ENST00000390425 CC2D2BQ6DHV5 1058 aa14.48□□□□□ -0.09
TRAV3-201ENST00000390425 TRPM7Q96QT4 1865 aa14.48□□□□□ -0.09
TRAV3-201ENST00000390425 PPEF1O14829 653 aaPredicted RBP14.47□□□□□ -0.09
TRAV3-201ENST00000390425 SLC10A5Q5PT55 438 aa14.47□□□□□ -0.09
TRAV3-201ENST00000390425 COL13A1Q5TAT6 717 aaPredicted RBP14.47□□□□□ -0.09
TRAV3-201ENST00000390425 COPS6Q7L5N1 327 aa14.47□□□□□ -0.09
TRAV3-201ENST00000390425 PPP1R42Q7Z4L9 355 aa14.47□□□□□ -0.09
TRAV3-201ENST00000390425 XAGE3Q8WTP9 111 aa14.47□□□□□ -0.09
TRAV3-201ENST00000390425 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
TRAV3-201ENST00000390425 CREBZFQ9NS37 354 aa14.47□□□□□ -0.09
TRAV3-201ENST00000390425 HACL1Q9UJ83 578 aa14.47□□□□□ -0.09
TRAV3-201ENST00000390425 ABCC4O15439 1325 aa14.46□□□□□ -0.09
TRAV3-201ENST00000390425 TCERG1O14776 1098 aaKnown RBP14.46□□□□□ -0.09
TRAV3-201ENST00000390425 ITGBL1O95965 494 aaPredicted RBP14.46□□□□□ -0.09
TRAV3-201ENST00000390425 HSPA1AP0DMV8 641 aaKnown RBP14.46□□□□□ -0.09
TRAV3-201ENST00000390425 HSPA1BP0DMV9 641 aaKnown RBP14.46□□□□□ -0.09
TRAV3-201ENST00000390425 EPHX2P34913 555 aa14.46□□□□□ -0.09
TRAV3-201ENST00000390425 NLRP10Q86W26 655 aa14.46□□□□□ -0.09
TRAV3-201ENST00000390425 GPC2Q8N158 579 aa14.46□□□□□ -0.09
TRAV3-201ENST00000390425 RUNDC1Q96C34 613 aa14.46□□□□□ -0.09
TRAV3-201ENST00000390425 UTP14AQ9BVJ6 771 aaKnown RBP14.46□□□□□ -0.09
TRAV3-201ENST00000390425 DDX21Q9NR30 783 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRAV3-201ENST00000390425 ADAMTS8Q9UP79 889 aa14.46□□□□□ -0.09
TRAV3-201ENST00000390425 AIMP1Q12904 312 aaKnown RBP14.45□□□□□ -0.1
TRAV3-201ENST00000390425 EAPPQ56P03 285 aaPredicted RBP14.45□□□□□ -0.1
TRAV3-201ENST00000390425 CHPF2Q9P2E5 772 aa14.45□□□□□ -0.1
TRAV3-201ENST00000390425 MKRN1Q9UHC7 482 aaKnown RBP14.45□□□□□ -0.1
TRAV3-201ENST00000390425 CNTNAP1P78357 1384 aa14.45□□□□□ -0.1
TRAV3-201ENST00000390425 WDR43Q15061 677 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRAV3-201ENST00000390425 HSP90AB3PQ58FF7 597 aa14.44□□□□□ -0.1
TRAV3-201ENST00000390425 JDP2Q8WYK2 163 aa14.44□□□□□ -0.1
TRAV3-201ENST00000390425 NLRP3Q96P20 1036 aa14.44□□□□□ -0.1
TRAV3-201ENST00000390425 PRKRIP1Q9H875 184 aaPredicted RBP14.44□□□□□ -0.1
TRAV3-201ENST00000390425 ATP6V0A2Q9Y487 856 aa14.44□□□□□ -0.1
TRAV3-201ENST00000390425 HCLS1P14317 486 aaPredicted RBP14.43□□□□□ -0.1
TRAV3-201ENST00000390425 SCNN1DP51172 638 aa14.43□□□□□ -0.1
TRAV3-201ENST00000390425 TCIRG1Q13488 830 aa14.43□□□□□ -0.1
TRAV3-201ENST00000390425 GRIPAP1Q4V328 841 aa14.43□□□□□ -0.1
TRAV3-201ENST00000390425 LARGE2Q8N3Y3 721 aa14.43□□□□□ -0.1
TRAV3-201ENST00000390425 LAS1LQ9Y4W2 734 aaKnown RBP14.43□□□□□ -0.1
TRAV3-201ENST00000390425 THSD7BQ9C0I4 1608 aa14.42□□□□□ -0.1
TRAV3-201ENST00000390425 HOXB7P09629 217 aa14.42□□□□□ -0.1
TRAV3-201ENST00000390425 EIF6P56537 245 aaKnown RBP14.42□□□□□ -0.1
TRAV3-201ENST00000390425 AOC3Q16853 763 aa14.42□□□□□ -0.1
TRAV3-201ENST00000390425 HDGFL1Q5TGJ6 251 aa14.42□□□□□ -0.1
TRAV3-201ENST00000390425 MAP1SQ66K74 1059 aaPredicted RBP14.42□□□□□ -0.1
TRAV3-201ENST00000390425 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
TRAV3-201ENST00000390425 GJA3Q9Y6H8 435 aa14.42□□□□□ -0.1
TRAV3-201ENST00000390425 SH3TC1Q8TE82 1336 aa14.41□□□□□ -0.1
TRAV3-201ENST00000390425 PPIP5K2O43314 1243 aa14.41□□□□□ -0.1
TRAV3-201ENST00000390425 PNMA8AQ86V59 439 aaPredicted RBP14.41□□□□□ -0.1
TRAV3-201ENST00000390425 CFAP44Q96MT7 982 aa14.41□□□□□ -0.1
TRAV3-201ENST00000390425 RTFDC1Q9BY42 306 aaPredicted RBP14.41□□□□□ -0.1
TRAV3-201ENST00000390425 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
TRAV3-201ENST00000390425 ZNF853P0CG23 659 aa14.4□□□□□ -0.1
TRAV3-201ENST00000390425 NIM1KQ8IY84 436 aa14.4□□□□□ -0.1
TRAV3-201ENST00000390425 CNTROBQ8N137 903 aa14.4□□□□□ -0.1
TRAV3-201ENST00000390425 PLBD2Q8NHP8 589 aa14.4□□□□□ -0.1
TRAV3-201ENST00000390425 ISCA1Q9BUE6 129 aa14.4□□□□□ -0.1
TRAV3-201ENST00000390425 MBIPQ9NS73 344 aa14.4□□□□□ -0.1
TRAV3-201ENST00000390425 TRMT112Q9UI30 125 aaKnown RBP14.4□□□□□ -0.1
TRAV3-201ENST00000390425 SCN9AQ15858 1988 aa14.4□□□□□ -0.1
TRAV3-201ENST00000390425 TMEM88BA6NKF7 163 aa14.39□□□□□ -0.11
TRAV3-201ENST00000390425 EPS15P42566 896 aa14.39□□□□□ -0.11
TRAV3-201ENST00000390425 GRAPQ13588 217 aa14.39□□□□□ -0.11
TRAV3-201ENST00000390425 DUSP27Q5VZP5 1158 aa14.39□□□□□ -0.11
TRAV3-201ENST00000390425 SP8Q8IXZ3 490 aa14.39□□□□□ -0.11
TRAV3-201ENST00000390425 GRAPLQ8TC17 118 aaPredicted RBP14.39□□□□□ -0.11
TRAV3-201ENST00000390425 POLR2AP24928 1970 aaKnown RBP14.38□□□□□ -0.11
TRAV3-201ENST00000390425 ATP5J2-PTCD1G3V325 749 aa14.38□□□□□ -0.11
TRAV3-201ENST00000390425 BBOX1O75936 387 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms