RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ESYT1Q9BSJ8 1104 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 KRT85P78386 507 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 ZSWIM4Q9H7M6 989 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 SCP2P22307 547 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 GJB2P29033 226 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 LIG3P49916 1009 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 CORO7P57737 925 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 TTC6Q86TZ1 520 aa17.55■□□□□ 0.4
VLDLR-202ENST00000382099 IRF6O14896 467 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 SUGP1Q8IWZ8 645 aaKnown RBP17.54■□□□□ 0.4
VLDLR-202ENST00000382099 GGNBP2Q9H3C7 697 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 A0A087WWV3 80 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 GSCP56915 257 aaPredicted RBP17.54■□□□□ 0.4
VLDLR-202ENST00000382099 MAP2K1Q02750 393 aaPredicted RBP17.54■□□□□ 0.4
VLDLR-202ENST00000382099 PDE11AQ9HCR9 933 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 RAI14Q9P0K7 980 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 SETBP1Q9Y6X0 1596 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 ADGRB3O60242 1522 aa17.54■□□□□ 0.4
VLDLR-202ENST00000382099 TPM1P09493 284 aa17.53■□□□□ 0.4
VLDLR-202ENST00000382099 DHX8Q14562 1220 aaKnown RBP17.53■□□□□ 0.4
VLDLR-202ENST00000382099 SLC24A3Q9HC58 644 aa17.53■□□□□ 0.4
VLDLR-202ENST00000382099 TADA2BQ86TJ2 420 aa17.53■□□□□ 0.4
VLDLR-202ENST00000382099 CCDC102AQ96A19 550 aa17.53■□□□□ 0.4
VLDLR-202ENST00000382099 CEP89Q96ST8 783 aa17.53■□□□□ 0.4
VLDLR-202ENST00000382099 ADGRB1O14514 1584 aa17.53■□□□□ 0.4
VLDLR-202ENST00000382099 SWT1Q5T5J6 900 aaKnown RBP17.53■□□□□ 0.4
VLDLR-202ENST00000382099 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
VLDLR-202ENST00000382099 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.4
VLDLR-202ENST00000382099 ATP8B1O43520 1251 aa17.52■□□□□ 0.4
VLDLR-202ENST00000382099 CCDC196A0A1B0GTZ2 297 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 NUTM2FA1L443 756 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 CPA1P15085 419 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 CCDC158Q5M9N0 1113 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 E4F1Q66K89 784 aaPredicted RBP17.52■□□□□ 0.39
VLDLR-202ENST00000382099 TSPYL6Q8N831 410 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 CEP120Q8N960 986 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 ZSCAN16Q9H4T2 348 aaPredicted RBP17.52■□□□□ 0.39
VLDLR-202ENST00000382099 PSD3Q9NYI0 1048 aa17.52■□□□□ 0.39
VLDLR-202ENST00000382099 SETQ01105 290 aaPredicted RBP17.51■□□□□ 0.39
VLDLR-202ENST00000382099 RGS12O14924 1447 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 NEBLO76041 1014 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 ERLIN2O94905 339 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 EFCAB13Q8IY85 973 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 FAN1Q9Y2M0 1017 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 USP32Q8NFA0 1604 aa17.51■□□□□ 0.39
VLDLR-202ENST00000382099 TADA3O75528 432 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 ECM2O94769 699 aaPredicted RBP17.5■□□□□ 0.39
VLDLR-202ENST00000382099 AK2P54819 239 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 HSP90B2PQ58FF3 399 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 GBP6Q6ZN66 633 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 MRPL50Q8N5N7 158 aaKnown RBP17.5■□□□□ 0.39
VLDLR-202ENST00000382099 CALR3Q96L12 384 aaKnown RBP17.5■□□□□ 0.39
VLDLR-202ENST00000382099 SPATA32Q96LK8 384 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 JPH2Q9BR39 696 aaPredicted RBP17.5■□□□□ 0.39
VLDLR-202ENST00000382099 PPLO60437 1756 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 SFPQP23246 707 aaKnown RBP eCLIP17.5■□□□□ 0.39
VLDLR-202ENST00000382099 TMC6Q7Z403 805 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
VLDLR-202ENST00000382099 MTMR6Q9Y217 621 aa17.5■□□□□ 0.39
VLDLR-202ENST00000382099 CCDC189A1A4V9 331 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 NPM1P06748 294 aaKnown RBP eCLIP17.49■□□□□ 0.39
VLDLR-202ENST00000382099 LONRF2Q1L5Z9 754 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 FBXW10Q5XX13 1052 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.49■□□□□ 0.39
VLDLR-202ENST00000382099 EFCAB8A8MWE9 144 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 CALRP27797 417 aaKnown RBP17.49■□□□□ 0.39
VLDLR-202ENST00000382099 CDC25BP30305 580 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 USP8P40818 1118 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 PDE1AP54750 535 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 ANAPC15P60006 121 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 ETF1P62495 437 aaKnown RBP17.49■□□□□ 0.39
VLDLR-202ENST00000382099 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
VLDLR-202ENST00000382099 DDX54Q8TDD1 881 aaKnown RBP17.49■□□□□ 0.39
VLDLR-202ENST00000382099 PARD6BQ9BYG5 372 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 KIDINS220Q9ULH0 1771 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 NR1I2O75469 434 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 MRFAP1L1Q96HT8 127 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 UBXN6Q9BZV1 441 aa17.49■□□□□ 0.39
VLDLR-202ENST00000382099 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
VLDLR-202ENST00000382099 ADGRB2O60241 1585 aa17.48■□□□□ 0.39
VLDLR-202ENST00000382099 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
VLDLR-202ENST00000382099 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
VLDLR-202ENST00000382099 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
VLDLR-202ENST00000382099 C11orf57Q6ZUT1 292 aaPredicted RBP17.48■□□□□ 0.39
VLDLR-202ENST00000382099 FUT8Q9BYC5 575 aa17.48■□□□□ 0.39
VLDLR-202ENST00000382099 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
VLDLR-202ENST00000382099 MKRN1Q9UHC7 482 aaKnown RBP17.48■□□□□ 0.39
VLDLR-202ENST00000382099 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
VLDLR-202ENST00000382099 H0YHG0 523 aa17.48■□□□□ 0.39
VLDLR-202ENST00000382099 N4BP1O75113 896 aaKnown RBP17.48■□□□□ 0.39
VLDLR-202ENST00000382099 SARNPP82979 210 aaKnown RBP17.48■□□□□ 0.39
VLDLR-202ENST00000382099 TTC19Q6DKK2 380 aaPredicted RBP17.48■□□□□ 0.39
VLDLR-202ENST00000382099 FMNL2Q96PY5 1086 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms