RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CCDC183Q5T5S1 534 aa19.49■□□□□ 0.71
NKX3-1-201ENST00000380871 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
NKX3-1-201ENST00000380871 CHMP4AQ9BY43 222 aa19.49■□□□□ 0.71
NKX3-1-201ENST00000380871 DDX21Q9NR30 783 aaKnown RBP eCLIP19.49■□□□□ 0.71
NKX3-1-201ENST00000380871 N4BP2Q86UW6 1770 aaPredicted RBP19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 GRM8O00222 908 aa19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 CYP27B1O15528 508 aa19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 F13A1P00488 732 aa19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 TERF1P54274 439 aa19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 PLCB2Q00722 1185 aa19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 JAKMIP1Q96N16 626 aaKnown RBP19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 CACNA1FO60840 1977 aa19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 DIAPH3Q9NSV4 1193 aa19.48■□□□□ 0.71
NKX3-1-201ENST00000380871 ADCY5O95622 1261 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 GJB2P29033 226 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 NEXNQ0ZGT2 675 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 G3BP1Q13283 466 aaKnown RBP eCLIP19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 NECAB1Q8N987 351 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 TMEM87AQ8NBN3 555 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 KIAA2012Q0VF49 1180 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 ST3GAL1Q11201 340 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 CADPS2Q86UW7 1296 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 TSC1Q92574 1164 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 CSPP1Q1MSJ5 1256 aa19.47■□□□□ 0.71
NKX3-1-201ENST00000380871 LINS1Q8NG48 757 aa19.46■□□□□ 0.71
NKX3-1-201ENST00000380871 BOLA2Q9H3K6 86 aa19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 IGKV5-2P06315 115 aa19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 UBE2HP62256 183 aa19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 PDIA6Q15084 440 aa19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 TCEANC2Q96MN5 208 aa19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 VPS37CA5D8V6 355 aaPredicted RBP19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 HSP90AB4PQ58FF6 505 aa19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 DNTTIP2Q5QJE6 756 aaKnown RBP19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 PDRG1Q9NUG6 133 aa19.45■□□□□ 0.7
NKX3-1-201ENST00000380871 AP5Z1O43299 807 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 EPHA10Q5JZY3 1008 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 FAM173BQ6P4H8 233 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 UBE3BQ7Z3V4 1068 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 MTMR6Q9Y217 621 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 NDUFB9Q9Y6M9 179 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 ALDH1L1O75891 902 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 KCNJ4P48050 445 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 FAM227BQ96M60 508 aa19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 TLR7Q9NYK1 1049 aaKnown RBP19.44■□□□□ 0.7
NKX3-1-201ENST00000380871 A0A0G2JS52 829 aa19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 GLRX3O76003 335 aaKnown RBP19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 EPB41L2O43491 1005 aaKnown RBP19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 ME3Q16798 604 aa19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 KAZALD1Q96I82 304 aa19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 FERMT3Q86UX7 667 aa19.43■□□□□ 0.7
NKX3-1-201ENST00000380871 EDC3Q96F86 508 aaKnown RBP19.42■□□□□ 0.7
NKX3-1-201ENST00000380871 TAF6LQ9Y6J9 622 aa19.42■□□□□ 0.7
NKX3-1-201ENST00000380871 FAM177BA6PVY3 158 aa19.42■□□□□ 0.7
NKX3-1-201ENST00000380871 FAM184AQ8NB25 1140 aa19.42■□□□□ 0.7
NKX3-1-201ENST00000380871 EAF2Q96CJ1 260 aaPredicted RBP19.42■□□□□ 0.7
NKX3-1-201ENST00000380871 ECHDC1Q9NTX5 307 aa19.42■□□□□ 0.7
NKX3-1-201ENST00000380871 ADAMTSL3P82987 1691 aa19.41■□□□□ 0.7
NKX3-1-201ENST00000380871 SASH1O94885 1247 aa19.41■□□□□ 0.7
NKX3-1-201ENST00000380871 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
NKX3-1-201ENST00000380871 TPCN1Q9ULQ1 816 aa19.41■□□□□ 0.7
NKX3-1-201ENST00000380871 EVA1CP58658 441 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 FUCA2Q9BTY2 467 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 MEGF6O75095 1541 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 TTC41PQ6P2S7 1318 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 USP42Q9H9J4 1324 aaKnown RBP19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 FMNL2Q96PY5 1086 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 CYP46A1Q9Y6A2 500 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 MST1RQ04912 1400 aa19.4■□□□□ 0.7
NKX3-1-201ENST00000380871 A0A087WZG4 1122 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 KDM6AO15550 1401 aaPredicted RBP19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 GPATCH3Q96I76 525 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 DCAF5Q96JK2 942 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 PKNOX2Q96KN3 472 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 ZBTB3Q9H5J0 574 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 ZSWIM6Q9HCJ5 1215 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 CRYBG1Q9Y4K1 1723 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 RBM8AQ9Y5S9 174 aaKnown RBP19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 KDM4AO75164 1064 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 A1BGP04217 495 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 GCKRQ14397 625 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 NOLC1Q14978 699 aaKnown RBP eCLIP19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 UVSSAQ2YD98 709 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 VPS53Q5VIR6 699 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 BRINP3Q76B58 766 aa19.39■□□□□ 0.69
NKX3-1-201ENST00000380871 DYNC1I1O14576 645 aa19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 CDC37L1Q7L3B6 337 aa19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 PIBF1Q8WXW3 757 aa19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 CCDC85AQ96PX6 553 aaPredicted RBP19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 CCDC171Q6TFL3 1326 aa19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 NMIQ13287 307 aaPredicted RBP19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 NECTIN1Q15223 517 aa19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 SPC24Q8NBT2 197 aa19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 CAMK4Q16566 473 aa19.38■□□□□ 0.69
NKX3-1-201ENST00000380871 CREB3L3Q68CJ9 461 aa19.37■□□□□ 0.69
NKX3-1-201ENST00000380871 RUFY2Q8WXA3 655 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms