RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 HYPKQ9NX55 129 aa19.93■□□□□ 0.78
RAB4B-202ENST00000378307 RNF181Q9P0P0 153 aa19.93■□□□□ 0.78
RAB4B-202ENST00000378307 CRY2Q49AN0 593 aa19.92■□□□□ 0.78
RAB4B-202ENST00000378307 PLBD2Q8NHP8 589 aa19.92■□□□□ 0.78
RAB4B-202ENST00000378307 GPBP1L1Q9HC44 474 aaPredicted RBP19.92■□□□□ 0.78
RAB4B-202ENST00000378307 IL16Q14005 1332 aa19.92■□□□□ 0.78
RAB4B-202ENST00000378307 PARP10Q53GL7 1025 aa19.91■□□□□ 0.78
RAB4B-202ENST00000378307 PPP1R42Q7Z4L9 355 aa19.91■□□□□ 0.78
RAB4B-202ENST00000378307 UTP14AQ9BVJ6 771 aaKnown RBP19.91■□□□□ 0.78
RAB4B-202ENST00000378307 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
RAB4B-202ENST00000378307 SLC51AQ86UW1 340 aa19.9■□□□□ 0.78
RAB4B-202ENST00000378307 RIC1Q4ADV7 1423 aa19.9■□□□□ 0.78
RAB4B-202ENST00000378307 ATP5J2-PTCD1G3V325 749 aa19.89■□□□□ 0.77
RAB4B-202ENST00000378307 LMNB1P20700 586 aa19.89■□□□□ 0.77
RAB4B-202ENST00000378307 HSP90AB3PQ58FF7 597 aa19.89■□□□□ 0.77
RAB4B-202ENST00000378307 SLC10A5Q5PT55 438 aa19.89■□□□□ 0.77
RAB4B-202ENST00000378307 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
RAB4B-202ENST00000378307 ISCA1Q9BUE6 129 aa19.89■□□□□ 0.77
RAB4B-202ENST00000378307 FANCIQ9NVI1 1328 aa19.89■□□□□ 0.77
RAB4B-202ENST00000378307 LAMB2P55268 1798 aa19.88■□□□□ 0.77
RAB4B-202ENST00000378307 C1QTNF8P60827 252 aa19.88■□□□□ 0.77
RAB4B-202ENST00000378307 HCLS1P14317 486 aaPredicted RBP19.87■□□□□ 0.77
RAB4B-202ENST00000378307 TWISTNBQ3B726 338 aaPredicted RBP19.87■□□□□ 0.77
RAB4B-202ENST00000378307 CCDC30Q5VVM6 783 aa19.87■□□□□ 0.77
RAB4B-202ENST00000378307 TRMT112Q9UI30 125 aaKnown RBP19.87■□□□□ 0.77
RAB4B-202ENST00000378307 DICER1Q9UPY3 1922 aaKnown RBP19.86■□□□□ 0.77
RAB4B-202ENST00000378307 KIF3CO14782 793 aa19.86■□□□□ 0.77
RAB4B-202ENST00000378307 ALDH1B1P30837 517 aa19.86■□□□□ 0.77
RAB4B-202ENST00000378307 HOXA10P31260 410 aaPredicted RBP19.86■□□□□ 0.77
RAB4B-202ENST00000378307 NMRK2Q9NPI5 230 aa19.86■□□□□ 0.77
RAB4B-202ENST00000378307 G2E3Q7L622 706 aa19.85■□□□□ 0.77
RAB4B-202ENST00000378307 RIC3Q7Z5B4 369 aa19.85■□□□□ 0.77
RAB4B-202ENST00000378307 TIAM2Q8IVF5 1701 aa19.85■□□□□ 0.77
RAB4B-202ENST00000378307 TAF1P21675 1872 aa19.84■□□□□ 0.77
RAB4B-202ENST00000378307 EXOSC9Q06265 439 aaKnown RBP19.84■□□□□ 0.77
RAB4B-202ENST00000378307 RPGRQ92834 1020 aaKnown RBP19.84■□□□□ 0.77
RAB4B-202ENST00000378307 NLRP3Q96P20 1036 aa19.84■□□□□ 0.77
RAB4B-202ENST00000378307 TAOK3Q9H2K8 898 aa19.84■□□□□ 0.77
RAB4B-202ENST00000378307 DDX60Q8IY21 1712 aaKnown RBP19.84■□□□□ 0.77
RAB4B-202ENST00000378307 SNED1Q8TER0 1413 aa19.84■□□□□ 0.77
RAB4B-202ENST00000378307 ZNF521Q96K83 1311 aa19.83■□□□□ 0.77
RAB4B-202ENST00000378307 LTBP3Q9NS15 1303 aa19.83■□□□□ 0.77
RAB4B-202ENST00000378307 VAMP4O75379 141 aa19.83■□□□□ 0.77
RAB4B-202ENST00000378307 GOLGA2Q08379 1002 aa19.83■□□□□ 0.77
RAB4B-202ENST00000378307 CCDC93Q567U6 631 aa19.83■□□□□ 0.77
RAB4B-202ENST00000378307 FAM89AQ96GI7 184 aa19.83■□□□□ 0.77
RAB4B-202ENST00000378307 MYD88Q99836 296 aa19.83■□□□□ 0.77
RAB4B-202ENST00000378307 RNF123Q5XPI4 1314 aa19.82■□□□□ 0.76
RAB4B-202ENST00000378307 SH3TC1Q8TE82 1336 aa19.82■□□□□ 0.76
RAB4B-202ENST00000378307 TRIM28Q13263 835 aaKnown RBP19.82■□□□□ 0.76
RAB4B-202ENST00000378307 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
RAB4B-202ENST00000378307 SOGA3Q5TF21 947 aa19.82■□□□□ 0.76
RAB4B-202ENST00000378307 RBM17Q96I25 401 aaKnown RBP19.82■□□□□ 0.76
RAB4B-202ENST00000378307 CRAMP1Q96RY5 1269 aa19.82■□□□□ 0.76
RAB4B-202ENST00000378307 ABCC4O15439 1325 aa19.8■□□□□ 0.76
RAB4B-202ENST00000378307 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
RAB4B-202ENST00000378307 METTL22Q9BUU2 404 aaPredicted RBP19.8■□□□□ 0.76
RAB4B-202ENST00000378307 ZNF277Q9NRM2 450 aaPredicted RBP19.8■□□□□ 0.76
RAB4B-202ENST00000378307 MAP3K2Q9Y2U5 619 aa19.8■□□□□ 0.76
RAB4B-202ENST00000378307 PI4KAP2A4QPH2 592 aa19.79■□□□□ 0.76
RAB4B-202ENST00000378307 FKBP4Q02790 459 aaKnown RBP eCLIP19.79■□□□□ 0.76
RAB4B-202ENST00000378307 PI4KAP1Q8N8J0 262 aa19.79■□□□□ 0.76
RAB4B-202ENST00000378307 JARID2Q92833 1246 aaPredicted RBP19.79■□□□□ 0.76
RAB4B-202ENST00000378307 STK31Q9BXU1 1019 aa19.79■□□□□ 0.76
RAB4B-202ENST00000378307 CHMP4AQ9BY43 222 aa19.79■□□□□ 0.76
RAB4B-202ENST00000378307 RRAGCQ9HB90 399 aa19.79■□□□□ 0.76
RAB4B-202ENST00000378307 ZC3H4Q9UPT8 1303 aaKnown RBP19.78■□□□□ 0.76
RAB4B-202ENST00000378307 COL4A1P02462 1669 aa19.78■□□□□ 0.76
RAB4B-202ENST00000378307 GLTPD2A6NH11 291 aa19.78■□□□□ 0.76
RAB4B-202ENST00000378307 PPEF1O14829 653 aaPredicted RBP19.78■□□□□ 0.76
RAB4B-202ENST00000378307 KSR2Q6VAB6 950 aa19.78■□□□□ 0.76
RAB4B-202ENST00000378307 RTKN2Q8IZC4 609 aa19.78■□□□□ 0.76
RAB4B-202ENST00000378307 CCER2I3L3R5 266 aa19.77■□□□□ 0.76
RAB4B-202ENST00000378307 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
RAB4B-202ENST00000378307 IGKV5-2P06315 115 aa19.77■□□□□ 0.76
RAB4B-202ENST00000378307 CACNA1FO60840 1977 aa19.77■□□□□ 0.75
RAB4B-202ENST00000378307 KDM2BQ8NHM5 1336 aa19.76■□□□□ 0.75
RAB4B-202ENST00000378307 ZBTB38Q8NAP3 1195 aaPredicted RBP19.76■□□□□ 0.75
RAB4B-202ENST00000378307 POTECB2RU33 542 aa19.75■□□□□ 0.75
RAB4B-202ENST00000378307 IRS4O14654 1257 aaPredicted RBP19.75■□□□□ 0.75
RAB4B-202ENST00000378307 FLIIQ13045 1269 aa19.75■□□□□ 0.75
RAB4B-202ENST00000378307 SF3B3Q15393 1217 aaKnown RBP19.75■□□□□ 0.75
RAB4B-202ENST00000378307 CCDC191Q8NCU4 936 aa19.75■□□□□ 0.75
RAB4B-202ENST00000378307 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
RAB4B-202ENST00000378307 COL4A5P29400 1685 aa19.75■□□□□ 0.75
RAB4B-202ENST00000378307 IARSP41252 1262 aaKnown RBP19.74■□□□□ 0.75
RAB4B-202ENST00000378307 CWF19L2Q2TBE0 894 aaKnown RBP19.74■□□□□ 0.75
RAB4B-202ENST00000378307 CC2D2BQ6DHV5 1058 aa19.74■□□□□ 0.75
RAB4B-202ENST00000378307 PSMD1Q99460 953 aa19.74■□□□□ 0.75
RAB4B-202ENST00000378307 CWC25Q9NXE8 425 aaPredicted RBP19.74■□□□□ 0.75
RAB4B-202ENST00000378307 ATP6V0A2Q9Y487 856 aa19.74■□□□□ 0.75
RAB4B-202ENST00000378307 TOMM70O94826 608 aa19.73■□□□□ 0.75
RAB4B-202ENST00000378307 PCCAP05165 728 aaPredicted RBP19.73■□□□□ 0.75
RAB4B-202ENST00000378307 DDX46Q7L014 1031 aaKnown RBP19.73■□□□□ 0.75
RAB4B-202ENST00000378307 CELF1Q92879 486 aaKnown RBP19.73■□□□□ 0.75
RAB4B-202ENST00000378307 CEP350Q5VT06 3117 aa19.73■□□□□ 0.75
RAB4B-202ENST00000378307 BBOX1O75936 387 aa19.72■□□□□ 0.75
RAB4B-202ENST00000378307 DDNO94850 711 aaPredicted RBP19.72■□□□□ 0.75
RAB4B-202ENST00000378307 GRAPQ13588 217 aa19.72■□□□□ 0.75
RAB4B-202ENST00000378307 GRAPLQ8TC17 118 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms