RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DBNDD2Q9BQY9 259 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 ROBO1Q9Y6N7 1651 aa9.77□□□□□ -0.85
CKAP2-203ENST00000378037 H3BQV1 296 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 STARD3NLO95772 234 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 PHKG2P15735 406 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 RXRAP19793 462 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 IFFO2Q5TF58 517 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 SLC52A2Q9HAB3 445 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 PALD1Q9ULE6 856 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 PTPRCP08575 1304 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 K7ELQ4 463 aaPredicted RBP9.76□□□□□ -0.85
CKAP2-203ENST00000378037 KCNQ2O43526 872 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 DNTTIP2Q5QJE6 756 aaKnown RBP9.76□□□□□ -0.85
CKAP2-203ENST00000378037 FAM184AQ8NB25 1140 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 HYPKQ9NX55 129 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 SMC3Q9UQE7 1217 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 NRAPQ86VF7 1730 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 GOLGA6L3A6NEY3 463 aa9.76□□□□□ -0.85
CKAP2-203ENST00000378037 PUS3Q9BZE2 481 aaKnown RBP9.76□□□□□ -0.85
CKAP2-203ENST00000378037 RBM27Q9P2N5 1060 aaKnown RBP9.76□□□□□ -0.85
CKAP2-203ENST00000378037 ATP8B2P98198 1209 aa9.75□□□□□ -0.85
CKAP2-203ENST00000378037 ZRSR1Q15695 479 aaKnown RBP9.75□□□□□ -0.85
CKAP2-203ENST00000378037 BMP2KLQ5H9B9 411 aa9.75□□□□□ -0.85
CKAP2-203ENST00000378037 CAMTA1Q9Y6Y1 1673 aa9.75□□□□□ -0.85
CKAP2-203ENST00000378037 EPHA10Q5JZY3 1008 aa9.75□□□□□ -0.85
CKAP2-203ENST00000378037 IFIT1P09914 478 aaKnown RBP9.74□□□□□ -0.85
CKAP2-203ENST00000378037 ZNF853P0CG23 659 aa9.74□□□□□ -0.85
CKAP2-203ENST00000378037 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
CKAP2-203ENST00000378037 NAP1L5Q96NT1 182 aaPredicted RBP9.74□□□□□ -0.85
CKAP2-203ENST00000378037 TFIP11Q9UBB9 837 aaKnown RBP9.74□□□□□ -0.85
CKAP2-203ENST00000378037 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
CKAP2-203ENST00000378037 IFIT5Q13325 482 aaKnown RBP9.74□□□□□ -0.85
CKAP2-203ENST00000378037 LRRC24Q50LG9 513 aa9.74□□□□□ -0.85
CKAP2-203ENST00000378037 MINDY4BA8MYZ0 360 aa9.74□□□□□ -0.85
CKAP2-203ENST00000378037 TNPO1Q92973 898 aaKnown RBP9.74□□□□□ -0.85
CKAP2-203ENST00000378037 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
CKAP2-203ENST00000378037 DDX21Q9NR30 783 aaKnown RBP eCLIP9.74□□□□□ -0.85
CKAP2-203ENST00000378037 ZBTB1Q9Y2K1 713 aa9.74□□□□□ -0.85
CKAP2-203ENST00000378037 RTL1A6NKG5 1358 aa9.74□□□□□ -0.85
CKAP2-203ENST00000378037 RAB11FIP3O75154 756 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 HSP90AB4PQ58FF6 505 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 MIGA1Q8NAN2 632 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 RUFY2Q8WXA3 655 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 PANK2Q9BZ23 570 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 ECHDC1Q9NTX5 307 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 CWC25Q9NXE8 425 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-203ENST00000378037 F8W031 263 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-203ENST00000378037 DZIP3Q86Y13 1208 aaKnown RBP9.73□□□□□ -0.85
CKAP2-203ENST00000378037 LINS1Q8NG48 757 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 ARHGAP45Q92619 1136 aa9.73□□□□□ -0.85
CKAP2-203ENST00000378037 EAF2Q96CJ1 260 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-203ENST00000378037 ATP7BP35670 1465 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 PHLPP1O60346 1717 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 CPLX1O14810 134 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 NUP133Q8WUM0 1156 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 RAI14Q9P0K7 980 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 ADGRL3Q9HAR2 1447 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 FAM208AQ9UK61 1670 aaKnown RBP9.72□□□□□ -0.85
CKAP2-203ENST00000378037 MCM4P33991 863 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 CAMK4Q16566 473 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 CHMP4AQ9BY43 222 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 LRP2BPQ9P2M1 347 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 ABCC4O15439 1325 aa9.72□□□□□ -0.85
CKAP2-203ENST00000378037 ATP2B2Q01814 1243 aa9.71□□□□□ -0.85
CKAP2-203ENST00000378037 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.85
CKAP2-203ENST00000378037 DRC7Q8IY82 874 aa9.71□□□□□ -0.85
CKAP2-203ENST00000378037 HDAC5Q9UQL6 1122 aa9.71□□□□□ -0.85
CKAP2-203ENST00000378037 ANKARQ7Z5J8 1434 aa9.71□□□□□ -0.85
CKAP2-203ENST00000378037 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.85
CKAP2-203ENST00000378037 GLRX3O76003 335 aaKnown RBP9.71□□□□□ -0.85
CKAP2-203ENST00000378037 CCDC158Q5M9N0 1113 aa9.71□□□□□ -0.85
CKAP2-203ENST00000378037 CD163L1Q9NR16 1453 aa9.71□□□□□ -0.85
CKAP2-203ENST00000378037 SF3A1Q15459 793 aaKnown RBP9.71□□□□□ -0.86
CKAP2-203ENST00000378037 BEND3Q5T5X7 828 aa9.71□□□□□ -0.86
CKAP2-203ENST00000378037 MSL1Q68DK7 614 aa9.71□□□□□ -0.86
CKAP2-203ENST00000378037 BICD2Q8TD16 824 aa9.71□□□□□ -0.86
CKAP2-203ENST00000378037 RALYLQ86SE5 291 aaKnown RBP9.7□□□□□ -0.86
CKAP2-203ENST00000378037 PIGBQ92521 554 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 GNPATO15228 680 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 GCKRQ14397 625 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 RABEP1Q15276 862 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 HLFQ16534 295 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 PDRG1Q9NUG6 133 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 TMX3Q96JJ7 454 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
CKAP2-203ENST00000378037 MYOM1P52179 1685 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 TOM1O60784 492 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 CHMLP26374 656 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 BLOC1S2Q6QNY1 142 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 IL25Q9H293 177 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 ANTXR1Q9H6X2 564 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 CPSF1Q10570 1443 aaKnown RBP9.69□□□□□ -0.86
CKAP2-203ENST00000378037 NEURL1BA8MQ27 555 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 IRS4O14654 1257 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-203ENST00000378037 NCBP3Q53F19 620 aaKnown RBP9.69□□□□□ -0.86
CKAP2-203ENST00000378037 TTLL5Q6EMB2 1281 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 CYP46A1Q9Y6A2 500 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 ADORA1P30542 326 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms