RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 ODF2LQ9ULJ1 636 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 KIF4AO95239 1232 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
CD28-202ENST00000374481 BRD3Q15059 726 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 PLEKHM2Q8IWE5 1019 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 STK11IPQ8N1F8 1099 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
CD28-202ENST00000374481 NEFHP12036 1026 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 ATP2B1P20020 1258 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 CACTINQ8WUQ7 758 aaKnown RBP11.79□□□□□ -0.52
CD28-202ENST00000374481 SLC12A5Q9H2X9 1139 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 ADAM21Q9UKJ8 722 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 CTAGE9A4FU28 777 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 CCDC50Q8IVM0 306 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 MICAL1Q8TDZ2 1067 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 PDE11AQ9HCR9 933 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
CD28-202ENST00000374481 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.52
CD28-202ENST00000374481 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
CD28-202ENST00000374481 GOLGA6CA6NDK9 693 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 GOLGA6DP0CG33 693 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 TADA2BQ86TJ2 420 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 N4BP2L2Q92802 583 aaPredicted RBP11.79□□□□□ -0.52
CD28-202ENST00000374481 CEP89Q96ST8 783 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 GOLGA6AQ9NYA3 693 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
CD28-202ENST00000374481 INSRP06213 1382 aa11.79□□□□□ -0.52
CD28-202ENST00000374481 FRMD3A2A2Y4 597 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 BLMP54132 1417 aaPredicted RBP11.78□□□□□ -0.52
CD28-202ENST00000374481 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
CD28-202ENST00000374481 TSHZ3Q63HK5 1081 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
CD28-202ENST00000374481 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 CTIFO43310 598 aaKnown RBP11.78□□□□□ -0.52
CD28-202ENST00000374481 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
CD28-202ENST00000374481 ZCCHC17Q9NP64 241 aaKnown RBP11.78□□□□□ -0.52
CD28-202ENST00000374481 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 DISP3Q9P2K9 1392 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 CNNM3Q8NE01 707 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 CABS1Q96KC9 395 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 LZTFL1Q9NQ48 299 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 KIF5BP33176 963 aa11.78□□□□□ -0.52
CD28-202ENST00000374481 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
CD28-202ENST00000374481 HECW1Q76N89 1606 aa11.77□□□□□ -0.52
CD28-202ENST00000374481 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.52
CD28-202ENST00000374481 NUTM1Q86Y26 1132 aa11.77□□□□□ -0.52
CD28-202ENST00000374481 IFT140Q96RY7 1462 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 TXLNAP40222 546 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 CCT5P48643 541 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 IMMTQ16891 758 aaKnown RBP11.77□□□□□ -0.53
CD28-202ENST00000374481 CLEC17AQ6ZS10 378 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 PAFAH1B1P43034 410 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 TRDNQ13061 729 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 MAATS1Q7Z4T9 603 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 BCAS4Q8TDM0 211 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 CCDC47Q96A33 483 aaKnown RBP11.77□□□□□ -0.53
CD28-202ENST00000374481 TRIM6Q9C030 488 aaPredicted RBP11.77□□□□□ -0.53
CD28-202ENST00000374481 IMPACTQ9P2X3 320 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 CTTNBP2Q8WZ74 1663 aa11.77□□□□□ -0.53
CD28-202ENST00000374481 SNAPC4Q5SXM2 1469 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 BUB1BO60566 1050 aaPredicted RBP11.76□□□□□ -0.53
CD28-202ENST00000374481 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 ZNF569Q5MCW4 686 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 CLSTN2Q9H4D0 955 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 TSPYL4Q9UJ04 414 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 ABCC11Q96J66 1382 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 PDE1AP54750 535 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 CKAP4Q07065 602 aaKnown RBP11.76□□□□□ -0.53
CD28-202ENST00000374481 ZKSCAN8Q15776 578 aaPredicted RBP11.76□□□□□ -0.53
CD28-202ENST00000374481 LONRF2Q1L5Z9 754 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 RALYLQ86SE5 291 aaKnown RBP11.76□□□□□ -0.53
CD28-202ENST00000374481 FAM71BQ8TC56 605 aa11.76□□□□□ -0.53
CD28-202ENST00000374481 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 AK2P54819 239 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 KRT32Q14532 448 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 MUM1L1Q5H9M0 696 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 ZSCAN16Q9H4T2 348 aaPredicted RBP11.75□□□□□ -0.53
CD28-202ENST00000374481 SUDS3Q9H7L9 328 aaPredicted RBP11.75□□□□□ -0.53
CD28-202ENST00000374481 FAN1Q9Y2M0 1017 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 A6NNZ2 444 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
CD28-202ENST00000374481 PLEKHA4Q9H4M7 779 aa11.75□□□□□ -0.53
CD28-202ENST00000374481 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
CD28-202ENST00000374481 MED4Q9NPJ6 270 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 KLHL10Q6JEL2 608 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 MRFAP1L1Q96HT8 127 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 BAG1Q99933 345 aaPredicted RBP11.74□□□□□ -0.53
CD28-202ENST00000374481 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
CD28-202ENST00000374481 FAM204AQ9H8W3 233 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms