RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 UBLCP1Q8WVY7 318 aaPredicted RBP10.57□□□□□ -0.72
PTPRT-205ENST00000373193 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 BAG4O95429 457 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 VIMP08670 466 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 TMEM132EQ6IEE7 984 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 RRBP1Q9P2E9 1410 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 EEF2P13639 858 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 TPX2Q9ULW0 747 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 CFAP157Q5JU67 520 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 TACC1O75410 805 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 RANBP6O60518 1105 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 AFMP43652 599 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 LZTFL1Q9NQ48 299 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 NDC80O14777 642 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 NLRP6P59044 892 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 TRIM47Q96LD4 638 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 PHAXQ9H814 394 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 MIS18AQ9NYP9 233 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 SLC12A7Q9Y666 1083 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 PHF23Q9BUL5 403 aaPredicted RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 CNPY2Q9Y2B0 182 aa10.56□□□□□ -0.72
PTPRT-205ENST00000373193 INTS8Q75QN2 995 aaKnown RBP10.56□□□□□ -0.72
PTPRT-205ENST00000373193 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 CASQ2O14958 399 aaPredicted RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 CCDC50Q8IVM0 306 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 TTC14Q96N46 770 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 SELENOOQ9BVL4 669 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 SH2B1Q9NRF2 756 aaPredicted RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 GOLIM4O00461 696 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 UAP1Q16222 522 aaPredicted RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 RAB11FIP3O75154 756 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 CCDC186Q7Z3E2 898 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 MX1P20591 662 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 SETDB1Q15047 1291 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 STMN4Q9H169 189 aaPredicted RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 DDX19AQ9NUU7 478 aaKnown RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 TXNDC9O14530 226 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 U2AF2P26368 475 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 LMNTD2Q8IXW0 634 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 MRRFQ96E11 262 aaKnown RBP10.55□□□□□ -0.72
PTPRT-205ENST00000373193 SYT1P21579 422 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 GBP1P32455 592 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 CETN1Q12798 172 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 SATB1Q01826 763 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 BICDL1Q6ZP65 573 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 STX6O43752 255 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 SPG7Q9UQ90 795 aa10.55□□□□□ -0.72
PTPRT-205ENST00000373193 NLRP5P59047 1200 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 PPFIBP2Q8ND30 876 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 SMG6Q86US8 1419 aaKnown RBP10.54□□□□□ -0.72
PTPRT-205ENST00000373193 SLU7O95391 586 aaKnown RBP10.54□□□□□ -0.72
PTPRT-205ENST00000373193 LCA5Q86VQ0 697 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 PFDN4Q9NQP4 134 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 ABTB2Q8N961 1025 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 CCDC194A0A1B0GVG4 234 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 GSDMBQ8TAX9 411 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 AOPEPQ8N6M6 819 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 BICD1Q96G01 975 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 SULT6B1Q6IMI4 303 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRT-205ENST00000373193 GUCA1BQ9UMX6 200 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
PTPRT-205ENST00000373193 ZNF131P52739 623 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 TSHZ3Q63HK5 1081 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 EXOC1Q9NV70 894 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 ZC3H6P61129 1189 aaKnown RBP10.54□□□□□ -0.72
PTPRT-205ENST00000373193 MKNK2Q9HBH9 465 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 RABGAP1Q9Y3P9 1069 aa10.54□□□□□ -0.72
PTPRT-205ENST00000373193 RRAGBQ5VZM2 374 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CCDC77Q9BR77 488 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CEP128Q6ZU80 1094 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 DPH6Q7L8W6 267 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 TRIM7Q9C029 511 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 USH1CQ9Y6N9 552 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 PLEKHH1Q9ULM0 1364 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CCDC88BA6NC98 1476 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
PTPRT-205ENST00000373193 PLEKHO1Q53GL0 409 aaPredicted RBP10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CALML4Q96GE6 196 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CERS3Q8IU89 383 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CACNA2D3Q8IZS8 1091 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 NAPBQ9H115 298 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CEP126Q9P2H0 1117 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 HSPA1LP34931 641 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CABP4P57796 275 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 C20orf194Q5TEA3 1177 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 TRIM68Q6AZZ1 485 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
PTPRT-205ENST00000373193 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
PTPRT-205ENST00000373193 IFI16Q16666 785 aaKnown RBP10.53□□□□□ -0.72
PTPRT-205ENST00000373193 GKAP1Q5VSY0 366 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms