RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ZSCAN29Q8IWY8 852 aaPredicted RBP12.19□□□□□ -0.46
NUP188-201ENST00000372577 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
NUP188-201ENST00000372577 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 TMTC2Q8N394 836 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 GCP02774 474 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 ZSCAN22P10073 491 aaPredicted RBP12.19□□□□□ -0.46
NUP188-201ENST00000372577 MCMDC2Q4G0Z9 681 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 AOX1Q06278 1338 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 CNNM2Q9H8M5 875 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 PRM3Q9NNZ6 103 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 ZSCAN12O43309 604 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 GPTP24298 496 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 IARSP41252 1262 aaKnown RBP12.18□□□□□ -0.46
NUP188-201ENST00000372577 CHRNA2Q15822 529 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 KANK3Q6NY19 840 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 KRT23Q9C075 422 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 CWC15Q9P013 229 aaKnown RBP12.18□□□□□ -0.46
NUP188-201ENST00000372577 BAG3O95817 575 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 IL2RBP14784 551 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
NUP188-201ENST00000372577 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 TSPYL6Q8N831 410 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 SYNMO15061 1565 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
NUP188-201ENST00000372577 PDE4BQ07343 736 aa12.18□□□□□ -0.46
NUP188-201ENST00000372577 NOM1Q5C9Z4 860 aaKnown RBP12.18□□□□□ -0.46
NUP188-201ENST00000372577 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 FGFR1OPO95684 399 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 STX1AQ16623 288 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 TTLL5Q6EMB2 1281 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 TANGO6Q9C0B7 1094 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 RANBP6O60518 1105 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 GSTO1P78417 241 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 ZNF397Q8NF99 534 aaPredicted RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 ERLIN2O94905 339 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 ADAMTS2O95450 1211 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 CAMK4Q16566 473 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 TMEM67Q5HYA8 995 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 FILIP1Q7Z7B0 1213 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 EPB41L2O43491 1005 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 KIF20AO95235 890 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 BMP15O95972 392 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 GSDMDP57764 484 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 KCNA6P17658 529 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 ZGPATQ8N5A5 531 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 INTS4Q96HW7 963 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
NUP188-201ENST00000372577 KDM5CP41229 1560 aa12.17□□□□□ -0.46
NUP188-201ENST00000372577 KIAA0232Q92628 1395 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 CHL1O00533 1208 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 ZNF76P36508 570 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 METAP2P50579 478 aaKnown RBP eCLIP12.16□□□□□ -0.469e-6■■■■□ 23.9
NUP188-201ENST00000372577 TMEM266Q2M3C6 531 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 NGLY1Q96IV0 654 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
NUP188-201ENST00000372577 ANXA1P04083 346 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 PLEKHM2Q8IWE5 1019 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 ORC3Q9UBD5 711 aaPredicted RBP12.16□□□□□ -0.46
NUP188-201ENST00000372577 TTC37Q6PGP7 1564 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 TMEM2Q9UHN6 1383 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
NUP188-201ENST00000372577 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 CRACR2BQ8N4Y2 399 aaPredicted RBP12.15□□□□□ -0.46
NUP188-201ENST00000372577 CCDC194A0A1B0GVG4 234 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.46
NUP188-201ENST00000372577 TNIP1Q15025 636 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 CCDC181Q5TID7 509 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
NUP188-201ENST00000372577 EIF5P55010 431 aaKnown RBP12.15□□□□□ -0.46
NUP188-201ENST00000372577 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 CRNKL1Q9BZJ0 848 aaKnown RBP12.15□□□□□ -0.46
NUP188-201ENST00000372577 TRIM35Q9UPQ4 493 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 MLH3Q9UHC1 1453 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 TSG101Q99816 390 aa12.15□□□□□ -0.46
NUP188-201ENST00000372577 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.47
NUP188-201ENST00000372577 UQCRHP07919 91 aa12.15□□□□□ -0.47
NUP188-201ENST00000372577 NLRP5P59047 1200 aa12.15□□□□□ -0.47
NUP188-201ENST00000372577 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.47
NUP188-201ENST00000372577 TSHZ3Q63HK5 1081 aa12.15□□□□□ -0.47
NUP188-201ENST00000372577 MAGI2Q86UL8 1455 aa12.15□□□□□ -0.47
NUP188-201ENST00000372577 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.47
NUP188-201ENST00000372577 CCDC66A2RUB6 948 aa12.14□□□□□ -0.47
NUP188-201ENST00000372577 GNAT2P19087 354 aa12.14□□□□□ -0.47
NUP188-201ENST00000372577 LRSAM1Q6UWE0 723 aa12.14□□□□□ -0.47
NUP188-201ENST00000372577 EHMT1Q9H9B1 1298 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms