RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
RPF1-201ENST00000370654 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
RPF1-201ENST00000370654 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
RPF1-201ENST00000370654 CHL1O00533 1208 aa17.28■□□□□ 0.36
RPF1-201ENST00000370654 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 HOXA10P31260 410 aaPredicted RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 IARSP41252 1262 aaKnown RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 L3MBTL3Q96JM7 780 aaPredicted RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
RPF1-201ENST00000370654 COPS6Q7L5N1 327 aa17.28■□□□□ 0.36
RPF1-201ENST00000370654 XAGE3Q8WTP9 111 aa17.28■□□□□ 0.36
RPF1-201ENST00000370654 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
RPF1-201ENST00000370654 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
RPF1-201ENST00000370654 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.36
RPF1-201ENST00000370654 FZD9O00144 591 aa17.27■□□□□ 0.35
RPF1-201ENST00000370654 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.35
RPF1-201ENST00000370654 RUNDC1Q96C34 613 aa17.27■□□□□ 0.35
RPF1-201ENST00000370654 PSMD1Q99460 953 aa17.26■□□□□ 0.35
RPF1-201ENST00000370654 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
RPF1-201ENST00000370654 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
RPF1-201ENST00000370654 SLC10A5Q5PT55 438 aa17.25■□□□□ 0.35
RPF1-201ENST00000370654 CRAMP1Q96RY5 1269 aa17.25■□□□□ 0.35
RPF1-201ENST00000370654 UTP14AQ9BVJ6 771 aaKnown RBP17.25■□□□□ 0.35
RPF1-201ENST00000370654 SCN4AP35499 1836 aa17.24■□□□□ 0.35
RPF1-201ENST00000370654 PCNTO95613 3336 aa17.24■□□□□ 0.35
RPF1-201ENST00000370654 PPEF1O14829 653 aaPredicted RBP17.24■□□□□ 0.35
RPF1-201ENST00000370654 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
RPF1-201ENST00000370654 COL13A1Q5TAT6 717 aaPredicted RBP17.24■□□□□ 0.35
RPF1-201ENST00000370654 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
RPF1-201ENST00000370654 NLRP10Q86W26 655 aa17.24■□□□□ 0.35
RPF1-201ENST00000370654 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
RPF1-201ENST00000370654 CHPF2Q9P2E5 772 aa17.24■□□□□ 0.35
RPF1-201ENST00000370654 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
RPF1-201ENST00000370654 PASKQ96RG2 1323 aa17.23■□□□□ 0.35
RPF1-201ENST00000370654 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
RPF1-201ENST00000370654 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
RPF1-201ENST00000370654 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
RPF1-201ENST00000370654 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
RPF1-201ENST00000370654 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
RPF1-201ENST00000370654 ABCC4O15439 1325 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 IQCA1LA6NCM1 817 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 ITGBL1O95965 494 aaPredicted RBP17.22■□□□□ 0.35
RPF1-201ENST00000370654 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 LDHDQ86WU2 507 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 LAMB2P55268 1798 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 ANKRD36CQ5JPF3 1778 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 ADAMTSL1Q8N6G6 1762 aa17.22■□□□□ 0.35
RPF1-201ENST00000370654 EPHX2P34913 555 aa17.21■□□□□ 0.35
RPF1-201ENST00000370654 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
RPF1-201ENST00000370654 TAF1P21675 1872 aa17.2■□□□□ 0.34
RPF1-201ENST00000370654 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
RPF1-201ENST00000370654 CREBZFQ9NS37 354 aa17.2■□□□□ 0.34
RPF1-201ENST00000370654 MBIPQ9NS73 344 aa17.2■□□□□ 0.34
RPF1-201ENST00000370654 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
RPF1-201ENST00000370654 COL4A1P02462 1669 aa17.19■□□□□ 0.34
RPF1-201ENST00000370654 HSPA1AP0DMV8 641 aaKnown RBP17.19■□□□□ 0.34
RPF1-201ENST00000370654 HSPA1BP0DMV9 641 aaKnown RBP17.19■□□□□ 0.34
RPF1-201ENST00000370654 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
RPF1-201ENST00000370654 MAP1SQ66K74 1059 aaPredicted RBP17.19■□□□□ 0.34
RPF1-201ENST00000370654 GPC2Q8N158 579 aa17.19■□□□□ 0.34
RPF1-201ENST00000370654 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
RPF1-201ENST00000370654 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
RPF1-201ENST00000370654 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
RPF1-201ENST00000370654 AOC3Q16853 763 aa17.18■□□□□ 0.34
RPF1-201ENST00000370654 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
RPF1-201ENST00000370654 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
RPF1-201ENST00000370654 CLEC11AQ9Y240 323 aa17.18■□□□□ 0.34
RPF1-201ENST00000370654 ATP5J2-PTCD1G3V325 749 aa17.17■□□□□ 0.34
RPF1-201ENST00000370654 APAF1O14727 1248 aa17.17■□□□□ 0.34
RPF1-201ENST00000370654 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
RPF1-201ENST00000370654 EPS15P42566 896 aa17.17■□□□□ 0.34
RPF1-201ENST00000370654 SCNN1DP51172 638 aa17.17■□□□□ 0.34
RPF1-201ENST00000370654 FMR1Q06787 632 aaKnown RBP eCLIP17.17■□□□□ 0.34
RPF1-201ENST00000370654 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
RPF1-201ENST00000370654 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
RPF1-201ENST00000370654 PPIP5K2O43314 1243 aa17.16■□□□□ 0.34
RPF1-201ENST00000370654 EIF6P56537 245 aaKnown RBP17.16■□□□□ 0.34
RPF1-201ENST00000370654 HSP90AB3PQ58FF7 597 aa17.16■□□□□ 0.34
RPF1-201ENST00000370654 PLBD2Q8NHP8 589 aa17.16■□□□□ 0.34
RPF1-201ENST00000370654 ISCA1Q9BUE6 129 aa17.16■□□□□ 0.34
RPF1-201ENST00000370654 SH3TC1Q8TE82 1336 aa17.16■□□□□ 0.34
RPF1-201ENST00000370654 DDX60Q8IY21 1712 aaKnown RBP17.15■□□□□ 0.34
RPF1-201ENST00000370654 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
RPF1-201ENST00000370654 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
RPF1-201ENST00000370654 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
RPF1-201ENST00000370654 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
RPF1-201ENST00000370654 HOXB7P09629 217 aa17.15■□□□□ 0.34
RPF1-201ENST00000370654 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
RPF1-201ENST00000370654 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
RPF1-201ENST00000370654 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
RPF1-201ENST00000370654 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
RPF1-201ENST00000370654 PHAXQ9H814 394 aaKnown RBP17.15■□□□□ 0.34
RPF1-201ENST00000370654 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
RPF1-201ENST00000370654 BBOX1O75936 387 aa17.14■□□□□ 0.33
RPF1-201ENST00000370654 GRAPQ13588 217 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms