RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 YY1AP1Q9H869 796 aa6.3□□□□□ -1.4
UBE3D-202ENST00000369746 METTL14Q9HCE5 456 aaKnown RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 RRAGDQ9NQL2 400 aaPredicted RBP6.3□□□□□ -1.4
UBE3D-202ENST00000369746 SAGE1Q9NXZ1 904 aa6.3□□□□□ -1.4
UBE3D-202ENST00000369746 CD163L1Q9NR16 1453 aa6.3□□□□□ -1.4
UBE3D-202ENST00000369746 PASKQ96RG2 1323 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 LETM1O95202 739 aaPredicted RBP6.29□□□□□ -1.4
UBE3D-202ENST00000369746 IL2RBP14784 551 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 WAPLQ7Z5K2 1190 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 CXorf38Q8TB03 319 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 NUDT16Q96DE0 195 aaKnown RBP6.29□□□□□ -1.4
UBE3D-202ENST00000369746 CTDP1Q9Y5B0 961 aaPredicted RBP6.29□□□□□ -1.4
UBE3D-202ENST00000369746 ANKRD26Q9UPS8 1709 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
UBE3D-202ENST00000369746 BDNFP23560 247 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 LMOD3Q0VAK6 560 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 C11orf96Q7Z7L8 435 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 UBA5Q9GZZ9 404 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 MAF1Q9H063 256 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.29□□□□□ -1.44e-6■■■■■ 111.8
UBE3D-202ENST00000369746 LTBP1Q14766 1721 aa6.29□□□□□ -1.4
UBE3D-202ENST00000369746 NLGN2Q8NFZ4 835 aa6.28□□□□□ -1.4
UBE3D-202ENST00000369746 FRAT1Q92837 279 aaPredicted RBP6.28□□□□□ -1.4
UBE3D-202ENST00000369746 PRAM1Q96QH2 718 aa6.28□□□□□ -1.4
UBE3D-202ENST00000369746 RGPD5Q99666 1765 aa6.28□□□□□ -1.4
UBE3D-202ENST00000369746 GOLIM4O00461 696 aa6.28□□□□□ -1.4
UBE3D-202ENST00000369746 WDHD1O75717 1129 aaPredicted RBP6.28□□□□□ -1.4
UBE3D-202ENST00000369746 HSPA8P11142 646 aaKnown RBP6.28□□□□□ -1.4
UBE3D-202ENST00000369746 CCDC87Q9NVE4 849 aa6.28□□□□□ -1.4
UBE3D-202ENST00000369746 STK10O94804 968 aaKnown RBP6.27□□□□□ -1.41
UBE3D-202ENST00000369746 TCF3P15923 654 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 MAP2K2P36507 400 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 XPCQ01831 940 aaPredicted RBP6.27□□□□□ -1.41
UBE3D-202ENST00000369746 SMC5Q8IY18 1101 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 POGKQ9P215 609 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 LTN1O94822 1766 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 ECE1P42892 770 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 PKN2Q16513 984 aaKnown RBP6.27□□□□□ -1.41
UBE3D-202ENST00000369746 NBPF9Q3BBW0 867 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 PPP4R3BQ5MIZ7 849 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 SOGA3Q5TF21 947 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 DPH6Q7L8W6 267 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 NLGN1Q8N2Q7 840 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 PROCA1Q8NCQ7 364 aaPredicted RBP6.27□□□□□ -1.41
UBE3D-202ENST00000369746 L3MBTL3Q96JM7 780 aaPredicted RBP6.27□□□□□ -1.41
UBE3D-202ENST00000369746 ARHGEF10LQ9HCE6 1279 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 ISY1Q9ULR0 285 aaKnown RBP6.27□□□□□ -1.41
UBE3D-202ENST00000369746 GLTPD2A6NH11 291 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 CSPP1Q1MSJ5 1256 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 WDR78Q5VTH9 848 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 SND1Q7KZF4 910 aaKnown RBP eCLIP6.27□□□□□ -1.41
UBE3D-202ENST00000369746 FRMD4BQ9Y2L6 1034 aa6.27□□□□□ -1.41
UBE3D-202ENST00000369746 BCORQ6W2J9 1755 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 ACEP12821 1306 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 CT47B1P0C2W7 299 aaPredicted RBP6.26□□□□□ -1.41
UBE3D-202ENST00000369746 MS4A1P11836 297 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 GYS2P54840 703 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 MCM6Q14566 821 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 CHADLQ6NUI6 762 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 TOM1L2Q6ZVM7 507 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 RNF25Q96BH1 459 aaPredicted RBP6.26□□□□□ -1.41
UBE3D-202ENST00000369746 STRN4Q9NRL3 753 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 PLSCR2Q9NRY7 297 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 GNL3LQ9NVN8 582 aaKnown RBP6.26□□□□□ -1.41
UBE3D-202ENST00000369746 LAMB1P07942 1786 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 RBM47A0AV96 593 aaKnown RBP6.26□□□□□ -1.41
UBE3D-202ENST00000369746 TTC30BQ8N4P2 665 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 NRBP1Q9UHY1 535 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 FAN1Q9Y2M0 1017 aa6.26□□□□□ -1.41
UBE3D-202ENST00000369746 USP47Q96K76 1375 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 CCDC189A1A4V9 331 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 LRRC4BQ9NT99 713 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 TFCP2L1Q9NZI6 479 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 MAGEC2Q9UBF1 373 aaPredicted RBP6.25□□□□□ -1.41
UBE3D-202ENST00000369746 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 N4BP2Q86UW6 1770 aaPredicted RBP6.25□□□□□ -1.41
UBE3D-202ENST00000369746 IQCA1LA6NCM1 817 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 PDE4DQ08499 809 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 LDHDQ86WU2 507 aa6.25□□□□□ -1.41
UBE3D-202ENST00000369746 COL23A1Q86Y22 540 aaPredicted RBP6.25□□□□□ -1.41
UBE3D-202ENST00000369746 TCERG1O14776 1098 aaKnown RBP6.24□□□□□ -1.41
UBE3D-202ENST00000369746 POLA2Q14181 598 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 NFKBIBQ15653 356 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 GEMIN8Q9NWZ8 242 aaKnown RBP6.24□□□□□ -1.41
UBE3D-202ENST00000369746 CHIC2Q9UKJ5 165 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 KCPQ6ZWJ8 1503 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 HDAC1Q13547 482 aaPredicted RBP6.24□□□□□ -1.41
UBE3D-202ENST00000369746 TSR1Q2NL82 804 aaKnown RBP6.24□□□□□ -1.41
UBE3D-202ENST00000369746 HSP90AB3PQ58FF7 597 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 ABTB2Q8N961 1025 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 DCAF11Q8TEB1 546 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 PIK3R5Q8WYR1 880 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 UBXN4Q92575 508 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 STK26Q9P289 416 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 CHPF2Q9P2E5 772 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 G3BP2Q9UN86 482 aaKnown RBP6.24□□□□□ -1.41
UBE3D-202ENST00000369746 FER1L6Q2WGJ9 1857 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 TRPM7Q96QT4 1865 aa6.24□□□□□ -1.41
UBE3D-202ENST00000369746 NRDCO43847 1150 aa6.23□□□□□ -1.41
UBE3D-202ENST00000369746 GPR153Q6NV75 609 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms