RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 CDC37L1Q7L3B6 337 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 KIAA1328Q86T90 577 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 SMARCE1Q969G3 411 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.93□□□□□ -0.98
UFL1-201ENST00000369278 ROCK1Q13464 1354 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 SAMD9Q5K651 1589 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 ZMYND10O75800 440 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 IVLP07476 585 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 ZNF569Q5MCW4 686 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
UFL1-201ENST00000369278 OTUD6BQ8N6M0 293 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 DYDC1Q8WWB3 177 aa8.93□□□□□ -0.98
UFL1-201ENST00000369278 COL17A1Q9UMD9 1497 aaPredicted RBP8.93□□□□□ -0.98
UFL1-201ENST00000369278 KANK1Q14678 1352 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 NR1I2O75469 434 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 SAMM50Q9Y512 469 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 CPLX2Q6PUV4 134 aaKnown RBP8.92□□□□□ -0.98
UFL1-201ENST00000369278 JPH2Q9BR39 696 aaPredicted RBP8.92□□□□□ -0.98
UFL1-201ENST00000369278 HYPKQ9NX55 129 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 GSDMDP57764 484 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 E2F5Q15329 346 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 JADE2Q9NQC1 790 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 DNMT1P26358 1616 aaKnown RBP8.92□□□□□ -0.98
UFL1-201ENST00000369278 SHROOM2Q13796 1616 aa8.92□□□□□ -0.98
UFL1-201ENST00000369278 GOLIM4O00461 696 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 ARID4AP29374 1257 aaPredicted RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 FILIP1LQ4L180 1135 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 RPAINQ86UA6 219 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 ZDHHC9Q9Y397 364 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.91□□□□□ -0.982e-8■■□□□ 14.1
UFL1-201ENST00000369278 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 ZBTB7BO15156 539 aaPredicted RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 MRPS25P82663 173 aaKnown RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 SARNPP82979 210 aaKnown RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 NGDNQ8NEJ9 315 aaKnown RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.91□□□□□ -0.98
UFL1-201ENST00000369278 ERLIN2O94905 339 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 PNMA6AP0CW24 399 aaPredicted RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 RNASE9P60153 205 aaKnown RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 HLTFQ14527 1009 aaKnown RBP eCLIP8.91□□□□□ -0.98
UFL1-201ENST00000369278 MAATS1Q7Z4T9 603 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 TACO1Q9BSH4 297 aaKnown RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 FTOQ9C0B1 505 aaKnown RBP eCLIP8.91□□□□□ -0.98
UFL1-201ENST00000369278 FEZ2Q9UHY8 353 aaPredicted RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 NDUFB9Q9Y6M9 179 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 GOLGA6L10A0A0M3HER8 536 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 GOLGA6L10A6NI86 522 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 JAK2O60674 1132 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 CCT5P48643 541 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 TRDNQ13061 729 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 ICE2Q659A1 982 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 NBPF11Q86T75 865 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 GOLGA1Q92805 767 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 PHACTR3Q96KR7 559 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 NUP88Q99567 741 aaPredicted RBP8.91□□□□□ -0.98
UFL1-201ENST00000369278 GUCA1BQ9UMX6 200 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 FAN1Q9Y2M0 1017 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 CAPN7Q9Y6W3 813 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 TRPM1Q7Z4N2 1603 aa8.91□□□□□ -0.98
UFL1-201ENST00000369278 NEMFO60524 1076 aa8.9□□□□□ -0.98
UFL1-201ENST00000369278 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
UFL1-201ENST00000369278 SLFN14P0C7P3 912 aa8.9□□□□□ -0.98
UFL1-201ENST00000369278 HPDP32754 393 aaPredicted RBP8.9□□□□□ -0.98
UFL1-201ENST00000369278 SPECC1Q5M775 1068 aa8.9□□□□□ -0.98
UFL1-201ENST00000369278 CCDC30Q5VVM6 783 aa8.9□□□□□ -0.98
UFL1-201ENST00000369278 ZSCAN31Q96LW9 406 aaPredicted RBP8.9□□□□□ -0.98
UFL1-201ENST00000369278 XPO4Q9C0E2 1151 aaKnown RBP8.9□□□□□ -0.98
UFL1-201ENST00000369278 KCNF1Q9H3M0 494 aa8.9□□□□□ -0.98
UFL1-201ENST00000369278 PRG4Q92954 1404 aaPredicted RBP8.9□□□□□ -0.98
UFL1-201ENST00000369278 CLGNO14967 610 aa8.9□□□□□ -0.98
UFL1-201ENST00000369278 ATP1A2P50993 1020 aa8.9□□□□□ -0.99
UFL1-201ENST00000369278 ADKP55263 362 aaKnown RBP8.9□□□□□ -0.99
UFL1-201ENST00000369278 CLEC17AQ6ZS10 378 aa8.9□□□□□ -0.99
UFL1-201ENST00000369278 CCDC114Q96M63 670 aa8.9□□□□□ -0.99
UFL1-201ENST00000369278 SMIM23A6NLE4 172 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 NDUFAB1O14561 156 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CBFA2T2O43439 604 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CHMLP26374 656 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 INPP5BP32019 993 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 FKBP4Q02790 459 aaKnown RBP eCLIP8.89□□□□□ -0.99
UFL1-201ENST00000369278 NFE2L2Q16236 605 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CCDC144BQ3MJ40 725 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 LRRC8AQ8IWT6 810 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 RAD50Q92878 1312 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CTAGE15A4D2H0 777 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
UFL1-201ENST00000369278 CTAGE8P0CG41 777 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CTAGE6Q86UF2 777 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CTAGE4Q8IX94 777 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 PPM1EQ8WY54 764 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 PRAM1Q96QH2 718 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CEP170Q5SW79 1584 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 DHX16O60231 1041 aaKnown RBP8.89□□□□□ -0.99
UFL1-201ENST00000369278 ERCC3P19447 782 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 VPS53Q5VIR6 699 aa8.89□□□□□ -0.99
UFL1-201ENST00000369278 CNNM3Q8NE01 707 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms