RNA–Protein interactions for RNA: ENST00000368759.5

BCCIP-203, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 1,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-203ENST00000368759 PDIA6Q15084 440 aa17.21■□□□□ 0.34
BCCIP-203ENST00000368759 PSMD1Q99460 953 aa17.21■□□□□ 0.34
BCCIP-203ENST00000368759 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
BCCIP-203ENST00000368759 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
BCCIP-203ENST00000368759 HOXA10P31260 410 aaPredicted RBP17.2■□□□□ 0.34
BCCIP-203ENST00000368759 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
BCCIP-203ENST00000368759 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
BCCIP-203ENST00000368759 GIGYF2Q6Y7W6 1299 aaKnown RBP17.19■□□□□ 0.34
BCCIP-203ENST00000368759 HACL1Q9UJ83 578 aa17.19■□□□□ 0.34
BCCIP-203ENST00000368759 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
BCCIP-203ENST00000368759 EAPPQ56P03 285 aaPredicted RBP17.18■□□□□ 0.34
BCCIP-203ENST00000368759 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
BCCIP-203ENST00000368759 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
BCCIP-203ENST00000368759 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
BCCIP-203ENST00000368759 ANXA1P04083 346 aa17.17■□□□□ 0.34
BCCIP-203ENST00000368759 EPHX2P34913 555 aa17.17■□□□□ 0.34
BCCIP-203ENST00000368759 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
BCCIP-203ENST00000368759 RIPK4P57078 832 aa17.16■□□□□ 0.34
BCCIP-203ENST00000368759 LAMB2P55268 1798 aa17.15■□□□□ 0.34
BCCIP-203ENST00000368759 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
BCCIP-203ENST00000368759 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
BCCIP-203ENST00000368759 CC2D2BQ6DHV5 1058 aa17.15■□□□□ 0.34
BCCIP-203ENST00000368759 GPC2Q8N158 579 aa17.15■□□□□ 0.34
BCCIP-203ENST00000368759 CRAMP1Q96RY5 1269 aa17.15■□□□□ 0.34
BCCIP-203ENST00000368759 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
BCCIP-203ENST00000368759 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
BCCIP-203ENST00000368759 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
BCCIP-203ENST00000368759 CAPN15O75808 1086 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
BCCIP-203ENST00000368759 JDP2Q8WYK2 163 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 RBM17Q96I25 401 aaKnown RBP17.13■□□□□ 0.33
BCCIP-203ENST00000368759 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 SCNN1DP51172 638 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 SLC10A5Q5PT55 438 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 CLEC11AQ9Y240 323 aa17.13■□□□□ 0.33
BCCIP-203ENST00000368759 VEGFBP49765 207 aa17.12■□□□□ 0.33
BCCIP-203ENST00000368759 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
BCCIP-203ENST00000368759 RALBP1Q15311 655 aa17.12■□□□□ 0.33
BCCIP-203ENST00000368759 PNMA8AQ86V59 439 aaPredicted RBP17.12■□□□□ 0.33
BCCIP-203ENST00000368759 CNTROBQ8N137 903 aa17.12■□□□□ 0.33
BCCIP-203ENST00000368759 NECTIN2Q92692 538 aa17.12■□□□□ 0.33
BCCIP-203ENST00000368759 GJA3Q9Y6H8 435 aa17.12■□□□□ 0.33
BCCIP-203ENST00000368759 ABCC4O15439 1325 aa17.12■□□□□ 0.33
BCCIP-203ENST00000368759 FOXN1O15353 648 aa17.11■□□□□ 0.33
BCCIP-203ENST00000368759 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
BCCIP-203ENST00000368759 LARGE2Q8N3Y3 721 aa17.11■□□□□ 0.33
BCCIP-203ENST00000368759 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
BCCIP-203ENST00000368759 EPS15P42566 896 aa17.1■□□□□ 0.33
BCCIP-203ENST00000368759 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
BCCIP-203ENST00000368759 COPS6Q7L5N1 327 aa17.1■□□□□ 0.33
BCCIP-203ENST00000368759 NLRP10Q86W26 655 aa17.1■□□□□ 0.33
BCCIP-203ENST00000368759 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
BCCIP-203ENST00000368759 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
BCCIP-203ENST00000368759 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
BCCIP-203ENST00000368759 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■■■■ 26.8
BCCIP-203ENST00000368759 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
BCCIP-203ENST00000368759 AOC3Q16853 763 aa17.09■□□□□ 0.33
BCCIP-203ENST00000368759 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
BCCIP-203ENST00000368759 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
BCCIP-203ENST00000368759 TAF1P21675 1872 aa17.08■□□□□ 0.33
BCCIP-203ENST00000368759 MYBBP1AQ9BQG0 1328 aaKnown RBP17.08■□□□□ 0.33
BCCIP-203ENST00000368759 RASSF10A6NK89 507 aa17.08■□□□□ 0.32
BCCIP-203ENST00000368759 CHL1O00533 1208 aa17.08■□□□□ 0.32
BCCIP-203ENST00000368759 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
BCCIP-203ENST00000368759 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
BCCIP-203ENST00000368759 NIM1KQ8IY84 436 aa17.08■□□□□ 0.32
BCCIP-203ENST00000368759 DDX60Q8IY21 1712 aaKnown RBP17.08■□□□□ 0.32
BCCIP-203ENST00000368759 COL4A1P02462 1669 aa17.07■□□□□ 0.32
BCCIP-203ENST00000368759 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
BCCIP-203ENST00000368759 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
BCCIP-203ENST00000368759 RTFDC1Q9BY42 306 aaPredicted RBP17.07■□□□□ 0.32
BCCIP-203ENST00000368759 DDX21Q9NR30 783 aaKnown RBP eCLIP17.07■□□□□ 0.32
BCCIP-203ENST00000368759 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
BCCIP-203ENST00000368759 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
BCCIP-203ENST00000368759 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
BCCIP-203ENST00000368759 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
BCCIP-203ENST00000368759 ZNF428Q96B54 188 aa17.06■□□□□ 0.32
BCCIP-203ENST00000368759 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
BCCIP-203ENST00000368759 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
BCCIP-203ENST00000368759 CXCL9Q07325 125 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 DDX10Q13206 875 aaKnown RBP17.04■□□□□ 0.32
BCCIP-203ENST00000368759 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 VPS33BQ9H267 617 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 WBP1LQ9NX94 342 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 DEFB115Q30KQ5 88 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
BCCIP-203ENST00000368759 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 TRPM7Q96QT4 1865 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 GPRC5DQ9NZD1 345 aa17.04■□□□□ 0.32
BCCIP-203ENST00000368759 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
BCCIP-203ENST00000368759 TRAF5O00463 557 aa17.03■□□□□ 0.32
BCCIP-203ENST00000368759 BBOX1O75936 387 aa17.03■□□□□ 0.32
BCCIP-203ENST00000368759 GRAPQ13588 217 aa17.03■□□□□ 0.32
BCCIP-203ENST00000368759 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
BCCIP-203ENST00000368759 GRAPLQ8TC17 118 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms