RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 COL13A1Q5TAT6 717 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-209ENST00000366735 JDP2Q8WYK2 163 aa16.32■□□□□ 0.2
MRPL55-209ENST00000366735 TAF1DQ9H5J8 278 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-209ENST00000366735 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-209ENST00000366735 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
MRPL55-209ENST00000366735 HACL1Q9UJ83 578 aa16.32■□□□□ 0.2
MRPL55-209ENST00000366735 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
MRPL55-209ENST00000366735 EIF4A1P60842 406 aaKnown RBP16.31■□□□□ 0.2
MRPL55-209ENST00000366735 CRY2Q49AN0 593 aa16.31■□□□□ 0.2
MRPL55-209ENST00000366735 EAPPQ56P03 285 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-209ENST00000366735 PNMA8AQ86V59 439 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-209ENST00000366735 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
MRPL55-209ENST00000366735 PSMD1Q99460 953 aa16.31■□□□□ 0.2
MRPL55-209ENST00000366735 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-209ENST00000366735 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
MRPL55-209ENST00000366735 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-209ENST00000366735 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
MRPL55-209ENST00000366735 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
MRPL55-209ENST00000366735 PLEKHF1Q96S99 279 aa16.3■□□□□ 0.2
MRPL55-209ENST00000366735 CNTNAP1P78357 1384 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 MYL6BP14649 208 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 EPHX2P34913 555 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 EIF6P56537 245 aaKnown RBP16.29■□□□□ 0.2
MRPL55-209ENST00000366735 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 NUTM1Q86Y26 1132 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 GPC2Q8N158 579 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
MRPL55-209ENST00000366735 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
MRPL55-209ENST00000366735 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
MRPL55-209ENST00000366735 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
MRPL55-209ENST00000366735 FZD9O00144 591 aa16.28■□□□□ 0.2
MRPL55-209ENST00000366735 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
MRPL55-209ENST00000366735 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
MRPL55-209ENST00000366735 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-209ENST00000366735 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
MRPL55-209ENST00000366735 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
MRPL55-209ENST00000366735 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
MRPL55-209ENST00000366735 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
MRPL55-209ENST00000366735 TMEM88BA6NKF7 163 aa16.27■□□□□ 0.2
MRPL55-209ENST00000366735 GPTP24298 496 aa16.27■□□□□ 0.2
MRPL55-209ENST00000366735 GIGYF2Q6Y7W6 1299 aaKnown RBP16.27■□□□□ 0.2
MRPL55-209ENST00000366735 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.2
MRPL55-209ENST00000366735 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
MRPL55-209ENST00000366735 AIDAQ96BJ3 306 aa16.27■□□□□ 0.2
MRPL55-209ENST00000366735 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
MRPL55-209ENST00000366735 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-209ENST00000366735 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-209ENST00000366735 OLFM4Q6UX06 510 aa16.26■□□□□ 0.19
MRPL55-209ENST00000366735 CRAMP1Q96RY5 1269 aa16.26■□□□□ 0.19
MRPL55-209ENST00000366735 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
MRPL55-209ENST00000366735 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
MRPL55-209ENST00000366735 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
MRPL55-209ENST00000366735 LTBP1Q14766 1721 aa16.25■□□□□ 0.19
MRPL55-209ENST00000366735 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
MRPL55-209ENST00000366735 CAPN15O75808 1086 aa16.24■□□□□ 0.19
MRPL55-209ENST00000366735 NTSR2O95665 410 aa16.24■□□□□ 0.19
MRPL55-209ENST00000366735 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
MRPL55-209ENST00000366735 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
MRPL55-209ENST00000366735 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
MRPL55-209ENST00000366735 LARGE2Q8N3Y3 721 aa16.24■□□□□ 0.19
MRPL55-209ENST00000366735 RALBP1Q15311 655 aa16.23■□□□□ 0.19
MRPL55-209ENST00000366735 NIM1KQ8IY84 436 aa16.23■□□□□ 0.19
MRPL55-209ENST00000366735 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
MRPL55-209ENST00000366735 GJA3Q9Y6H8 435 aa16.23■□□□□ 0.19
MRPL55-209ENST00000366735 THSD7BQ9C0I4 1608 aa16.23■□□□□ 0.19
MRPL55-209ENST00000366735 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
MRPL55-209ENST00000366735 RIPK4P57078 832 aa16.22■□□□□ 0.19
MRPL55-209ENST00000366735 SUPT20HQ8NEM7 779 aa16.22■□□□□ 0.19
MRPL55-209ENST00000366735 UTP14AQ9BVJ6 771 aaKnown RBP16.22■□□□□ 0.19
MRPL55-209ENST00000366735 COL4A5P29400 1685 aa16.21■□□□□ 0.19
MRPL55-209ENST00000366735 ITGBL1O95965 494 aaPredicted RBP16.21■□□□□ 0.19
MRPL55-209ENST00000366735 EIF2S2P20042 333 aaKnown RBP16.21■□□□□ 0.19
MRPL55-209ENST00000366735 CNTROBQ8N137 903 aa16.21■□□□□ 0.19
MRPL55-209ENST00000366735 TAF1P21675 1872 aa16.2■□□□□ 0.18
MRPL55-209ENST00000366735 PPIP5K2O43314 1243 aa16.2■□□□□ 0.18
MRPL55-209ENST00000366735 CTCFP49711 727 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-209ENST00000366735 DDX10Q13206 875 aaKnown RBP16.2■□□□□ 0.18
MRPL55-209ENST00000366735 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-209ENST00000366735 RASSF10A6NK89 507 aa16.19■□□□□ 0.18
MRPL55-209ENST00000366735 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
MRPL55-209ENST00000366735 USP50Q70EL3 339 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-209ENST00000366735 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
MRPL55-209ENST00000366735 ABT1Q9ULW3 272 aaKnown RBP16.19■□□□□ 0.18
MRPL55-209ENST00000366735 ATP6V0A2Q9Y487 856 aa16.19■□□□□ 0.18
MRPL55-209ENST00000366735 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
MRPL55-209ENST00000366735 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
MRPL55-209ENST00000366735 VEGFBP49765 207 aa16.18■□□□□ 0.18
MRPL55-209ENST00000366735 DEFB115Q30KQ5 88 aa16.18■□□□□ 0.18
MRPL55-209ENST00000366735 ABCC4O15439 1325 aa16.18■□□□□ 0.18
MRPL55-209ENST00000366735 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
MRPL55-209ENST00000366735 CDHR2Q9BYE9 1310 aa16.18■□□□□ 0.18
MRPL55-209ENST00000366735 FOXN1O15353 648 aa16.17■□□□□ 0.18
MRPL55-209ENST00000366735 SLC10A5Q5PT55 438 aa16.17■□□□□ 0.18
MRPL55-209ENST00000366735 TMC4Q7Z404 712 aa16.17■□□□□ 0.18
MRPL55-209ENST00000366735 SH3TC1Q8TE82 1336 aa16.17■□□□□ 0.18
MRPL55-209ENST00000366735 BBOX1O75936 387 aa16.16■□□□□ 0.18
MRPL55-209ENST00000366735 ECE1P42892 770 aa16.16■□□□□ 0.18
MRPL55-209ENST00000366735 SCNN1DP51172 638 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms