RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 IDH3AP50213 366 aa7.17□□□□□ -1.26
RNU6-1339P-201ENST00000363574 LINC00528Q8N1L1 170 aa7.17□□□□□ -1.26
RNU6-1339P-201ENST00000363574 TNFRSF21O75509 655 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 INPP5BP32019 993 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 POU4F2Q12837 409 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 SF3A1Q15459 793 aaKnown RBP7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 USPL1Q5W0Q7 1092 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 NBPF10Q6P3W6 841 aaKnown RBP7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 XKR5Q6UX68 686 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 CRELD1Q96HD1 420 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 TGIF2Q9GZN2 237 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 FOXD3Q9UJU5 478 aaPredicted RBP7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 SPG7Q9UQ90 795 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 USP20Q9Y2K6 914 aa7.16□□□□□ -1.26
RNU6-1339P-201ENST00000363574 ARSDP51689 593 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 TRIP4Q15650 581 aaPredicted RBP7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 BICDL1Q6ZP65 573 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 TRIM67Q6ZTA4 783 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 BTLAQ7Z6A9 289 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 RNF217Q8TC41 542 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 TINF2Q9BSI4 451 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 ANKIB1Q9P2G1 1089 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
RNU6-1339P-201ENST00000363574 CAPN5O15484 640 aaPredicted RBP7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 EIF4BP23588 611 aaKnown RBP7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PRR20EP86478 221 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PRR20CP86479 221 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PRR20DP86480 221 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PRR20BP86481 221 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PRR20AP86496 221 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PI16Q6UXB8 463 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PRICKLE2Q7Z3G6 844 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 UBXN4Q92575 508 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 ZIC5Q96T25 663 aa7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 RTCBQ9Y3I0 505 aaKnown RBP7.14□□□□□ -1.27
RNU6-1339P-201ENST00000363574 UPP2O95045 317 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 GRNP28799 593 aaKnown RBP7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 IRS1P35568 1242 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 WDR44Q5JSH3 913 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PDE12Q6L8Q7 609 aaKnown RBP7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 LRRC69Q6ZNQ3 347 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 ZNF438Q7Z4V0 828 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 CMTR1Q8N1G2 835 aaKnown RBP7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 SNX29Q8TEQ0 813 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 CCDC74AQ96AQ1 378 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 C12orf49Q9H741 205 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 CCSER2Q9H7U1 834 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 ZFYVE28Q9HCC9 887 aa7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PPP1R1BQ9UD71 204 aaPredicted RBP7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 FNDC3AQ9Y2H6 1198 aaKnown RBP7.13□□□□□ -1.27
RNU6-1339P-201ENST00000363574 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 MSX1P28360 303 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 MMRN1Q13201 1228 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 LYSMD3Q7Z3D4 306 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 EPS8L3Q8TE67 593 aaKnown RBP7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 OSBPL7Q9BZF2 842 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 ACBD3Q9H3P7 528 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PLA2G2EQ9NZK7 142 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 TMEM63CQ9P1W3 806 aa7.12□□□□□ -1.27
RNU6-1339P-201ENST00000363574 A0A1B0GTH6 734 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 GIPC1O14908 333 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 BMP2P12643 396 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 TYRO3Q06418 890 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 ARSJQ5FYB0 599 aaPredicted RBP7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 C6orf118Q5T5N4 469 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 SLC43A3Q8NBI5 491 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 ELP3Q9H9T3 547 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 CAPN10Q9HC96 672 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 NEUROD4Q9HD90 331 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 TIMMDC1Q9NPL8 285 aa7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.11□□□□□ -1.27
RNU6-1339P-201ENST00000363574 A0A1W2PNR3 127 aa7.1□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PHACTR2O75167 634 aa7.1□□□□□ -1.27
RNU6-1339P-201ENST00000363574 RHOQP17081 205 aa7.1□□□□□ -1.27
RNU6-1339P-201ENST00000363574 CHRDQ9H2X0 955 aa7.1□□□□□ -1.27
RNU6-1339P-201ENST00000363574 USP31Q70CQ4 1352 aa7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 TNNI2P48788 182 aa7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 PTPN12Q05209 780 aaKnown RBP7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 ZNF394Q53GI3 561 aa7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 MRPL14Q6P1L8 145 aaKnown RBP7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 NLRP2Q9NX02 1062 aa7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 DDX41Q9UJV9 622 aaKnown RBP7.09□□□□□ -1.27
RNU6-1339P-201ENST00000363574 XYLBO75191 536 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 EGFRP00533 1210 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 POLR3DP05423 398 aaPredicted RBP7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 EPB42P16452 691 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 RACK1P63244 317 aaKnown RBP7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 MEI1Q5TIA1 1274 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 C1orf127Q8N9H9 656 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 TANGO6Q9C0B7 1094 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 CNTN3Q9P232 1028 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 FAM8A1Q9UBU6 413 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 PCDHGB7Q9Y5F8 929 aa7.08□□□□□ -1.28
RNU6-1339P-201ENST00000363574 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 EREGO14944 169 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 USP17L7P0C7H9 530 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 NXPE4Q6UWF7 544 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 HS2ST1Q7LGA3 356 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms