RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 L3MBTL3Q96JM7 780 aaPredicted RBP22.12■■□□□ 1.13
SMN1-201ENST00000351205 HOXA10P31260 410 aaPredicted RBP22.11■■□□□ 1.13
SMN1-201ENST00000351205 IARSP41252 1262 aaKnown RBP22.11■■□□□ 1.13
SMN1-201ENST00000351205 CHADLQ6NUI6 762 aa22.11■■□□□ 1.13
SMN1-201ENST00000351205 SYNE4Q8N205 404 aa22.11■■□□□ 1.13
SMN1-201ENST00000351205 IQCA1LA6NCM1 817 aa22.1■■□□□ 1.13
SMN1-201ENST00000351205 PARP10Q53GL7 1025 aa22.09■■□□□ 1.13
SMN1-201ENST00000351205 C3orf67Q6ZVT6 689 aa22.09■■□□□ 1.13
SMN1-201ENST00000351205 PPP1R42Q7Z4L9 355 aa22.09■■□□□ 1.13
SMN1-201ENST00000351205 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
SMN1-201ENST00000351205 PSMD1Q99460 953 aa22.09■■□□□ 1.13
SMN1-201ENST00000351205 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMN1-201ENST00000351205 CC2D2BQ6DHV5 1058 aa22.08■■□□□ 1.13
SMN1-201ENST00000351205 RUNDC1Q96C34 613 aa22.08■■□□□ 1.13
SMN1-201ENST00000351205 TAF1DQ9H5J8 278 aaPredicted RBP22.08■■□□□ 1.13
SMN1-201ENST00000351205 TRIM35Q9UPQ4 493 aa22.08■■□□□ 1.13
SMN1-201ENST00000351205 FZD9O00144 591 aa22.07■■□□□ 1.12
SMN1-201ENST00000351205 KRT24Q2M2I5 525 aa22.07■■□□□ 1.12
SMN1-201ENST00000351205 SLC51AQ86UW1 340 aa22.07■■□□□ 1.12
SMN1-201ENST00000351205 RBM17Q96I25 401 aaKnown RBP22.07■■□□□ 1.12
SMN1-201ENST00000351205 CRAMP1Q96RY5 1269 aa22.07■■□□□ 1.12
SMN1-201ENST00000351205 COL4A5P29400 1685 aa22.07■■□□□ 1.12
SMN1-201ENST00000351205 LAMB2P55268 1798 aa22.07■■□□□ 1.12
SMN1-201ENST00000351205 CHL1O00533 1208 aa22.06■■□□□ 1.12
SMN1-201ENST00000351205 COPS6Q7L5N1 327 aa22.06■■□□□ 1.12
SMN1-201ENST00000351205 XAGE3Q8WTP9 111 aa22.06■■□□□ 1.12
SMN1-201ENST00000351205 UTP14AQ9BVJ6 771 aaKnown RBP22.06■■□□□ 1.12
SMN1-201ENST00000351205 PPEF1O14829 653 aaPredicted RBP22.05■■□□□ 1.12
SMN1-201ENST00000351205 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
SMN1-201ENST00000351205 LDHDQ86WU2 507 aa22.05■■□□□ 1.12
SMN1-201ENST00000351205 NLRP3Q96P20 1036 aa22.05■■□□□ 1.12
SMN1-201ENST00000351205 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
SMN1-201ENST00000351205 LAS1LQ9Y4W2 734 aaKnown RBP22.05■■□□□ 1.12
SMN1-201ENST00000351205 ADAMTSL1Q8N6G6 1762 aa22.04■■□□□ 1.12
SMN1-201ENST00000351205 TCERG1O14776 1098 aaKnown RBP22.04■■□□□ 1.12
SMN1-201ENST00000351205 JDP2Q8WYK2 163 aa22.04■■□□□ 1.12
SMN1-201ENST00000351205 HACL1Q9UJ83 578 aa22.04■■□□□ 1.12
SMN1-201ENST00000351205 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
SMN1-201ENST00000351205 GRIPAP1Q4V328 841 aa22.03■■□□□ 1.12
SMN1-201ENST00000351205 EAPPQ56P03 285 aaPredicted RBP22.03■■□□□ 1.12
SMN1-201ENST00000351205 HSP90AB3PQ58FF7 597 aa22.03■■□□□ 1.12
SMN1-201ENST00000351205 SLC10A5Q5PT55 438 aa22.03■■□□□ 1.12
SMN1-201ENST00000351205 DDX21Q9NR30 783 aaKnown RBP eCLIP22.03■■□□□ 1.12
SMN1-201ENST00000351205 EPHX2P34913 555 aa22.02■■□□□ 1.12
SMN1-201ENST00000351205 NLRP10Q86W26 655 aa22.02■■□□□ 1.12
SMN1-201ENST00000351205 GPC2Q8N158 579 aa22.02■■□□□ 1.12
SMN1-201ENST00000351205 CREBZFQ9NS37 354 aa22.02■■□□□ 1.12
SMN1-201ENST00000351205 CHPF2Q9P2E5 772 aa22.02■■□□□ 1.12
SMN1-201ENST00000351205 PASKQ96RG2 1323 aa22.02■■□□□ 1.12
SMN1-201ENST00000351205 PRKRIP1Q9H875 184 aaPredicted RBP22.01■■□□□ 1.11
SMN1-201ENST00000351205 ABCC4O15439 1325 aa22.01■■□□□ 1.11
SMN1-201ENST00000351205 TCIRG1Q13488 830 aa22■■□□□ 1.11
SMN1-201ENST00000351205 HDGFL1Q5TGJ6 251 aa22■■□□□ 1.11
SMN1-201ENST00000351205 LARGE2Q8N3Y3 721 aa22■■□□□ 1.11
SMN1-201ENST00000351205 LTBP1Q14766 1721 aa22■■□□□ 1.11
SMN1-201ENST00000351205 HCLS1P14317 486 aaPredicted RBP21.99■■□□□ 1.11
SMN1-201ENST00000351205 EIF6P56537 245 aaKnown RBP21.99■■□□□ 1.11
SMN1-201ENST00000351205 ATP6V0A2Q9Y487 856 aa21.99■■□□□ 1.11
SMN1-201ENST00000351205 ITGBL1O95965 494 aaPredicted RBP21.98■■□□□ 1.11
SMN1-201ENST00000351205 HOXB7P09629 217 aa21.98■■□□□ 1.11
SMN1-201ENST00000351205 COL13A1Q5TAT6 717 aaPredicted RBP21.98■■□□□ 1.11
SMN1-201ENST00000351205 MKRN1Q9UHC7 482 aaKnown RBP21.98■■□□□ 1.11
SMN1-201ENST00000351205 TRMT112Q9UI30 125 aaKnown RBP21.98■■□□□ 1.11
SMN1-201ENST00000351205 CLEC11AQ9Y240 323 aa21.98■■□□□ 1.11
SMN1-201ENST00000351205 GJA3Q9Y6H8 435 aa21.98■■□□□ 1.11
SMN1-201ENST00000351205 TAF1P21675 1872 aa21.98■■□□□ 1.11
SMN1-201ENST00000351205 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
SMN1-201ENST00000351205 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
SMN1-201ENST00000351205 PNMA8AQ86V59 439 aaPredicted RBP21.97■■□□□ 1.11
SMN1-201ENST00000351205 CFAP44Q96MT7 982 aa21.97■■□□□ 1.11
SMN1-201ENST00000351205 DDX60Q8IY21 1712 aaKnown RBP21.97■■□□□ 1.11
SMN1-201ENST00000351205 PPIP5K2O43314 1243 aa21.96■■□□□ 1.11
SMN1-201ENST00000351205 ZNF428Q96B54 188 aa21.96■■□□□ 1.11
SMN1-201ENST00000351205 TMX4Q9H1E5 349 aaPredicted RBP21.96■■□□□ 1.11
SMN1-201ENST00000351205 SH3TC1Q8TE82 1336 aa21.96■■□□□ 1.11
SMN1-201ENST00000351205 MAP1SQ66K74 1059 aaPredicted RBP21.95■■□□□ 1.1
SMN1-201ENST00000351205 NIM1KQ8IY84 436 aa21.95■■□□□ 1.1
SMN1-201ENST00000351205 PLBD2Q8NHP8 589 aa21.95■■□□□ 1.1
SMN1-201ENST00000351205 MBIPQ9NS73 344 aa21.95■■□□□ 1.1
SMN1-201ENST00000351205 DBF4Q9UBU7 674 aaPredicted RBP21.95■■□□□ 1.1
SMN1-201ENST00000351205 BBOX1O75936 387 aa21.94■■□□□ 1.1
SMN1-201ENST00000351205 SCNN1DP51172 638 aa21.94■■□□□ 1.1
SMN1-201ENST00000351205 AOC3Q16853 763 aa21.94■■□□□ 1.1
SMN1-201ENST00000351205 DUSP27Q5VZP5 1158 aa21.94■■□□□ 1.1
SMN1-201ENST00000351205 ANKRD13DQ6ZTN6 518 aa21.94■■□□□ 1.1
SMN1-201ENST00000351205 CNTNAP1P78357 1384 aa21.94■■□□□ 1.1
SMN1-201ENST00000351205 LMOD1P29536 600 aaPredicted RBP21.93■■□□□ 1.1
SMN1-201ENST00000351205 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
SMN1-201ENST00000351205 SP8Q8IXZ3 490 aa21.93■■□□□ 1.1
SMN1-201ENST00000351205 CNTROBQ8N137 903 aa21.93■■□□□ 1.1
SMN1-201ENST00000351205 RTFDC1Q9BY42 306 aaPredicted RBP21.93■■□□□ 1.1
SMN1-201ENST00000351205 TMEM88BA6NKF7 163 aa21.92■■□□□ 1.1
SMN1-201ENST00000351205 APAF1O14727 1248 aa21.92■■□□□ 1.1
SMN1-201ENST00000351205 ZNF853P0CG23 659 aa21.92■■□□□ 1.1
SMN1-201ENST00000351205 ISCA1Q9BUE6 129 aa21.92■■□□□ 1.1
SMN1-201ENST00000351205 VPS33BQ9H267 617 aa21.92■■□□□ 1.1
SMN1-201ENST00000351205 LRRC37AA6NMS7 1700 aa21.92■■□□□ 1.1
SMN1-201ENST00000351205 EPS15P42566 896 aa21.91■■□□□ 1.1
SMN1-201ENST00000351205 GRAPQ13588 217 aa21.91■■□□□ 1.1
SMN1-201ENST00000351205 DPP8Q6V1X1 898 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms