RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
TRAF3-201ENST00000347662 WASF1Q92558 559 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
TRAF3-201ENST00000347662 CETN1Q12798 172 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
TRAF3-201ENST00000347662 MCM2P49736 904 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 ANXA1P04083 346 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 FAM184BQ9ULE4 1060 aa13.57□□□□□ -0.24
TRAF3-201ENST00000347662 A0A087WZG4 1122 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
TRAF3-201ENST00000347662 CAMK4Q16566 473 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 IFNL2Q8IZJ0 200 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 ALS2CR12Q96Q35 445 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 MCM3P25205 808 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 ZBTB16Q05516 673 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 TMEM57Q8N5G2 664 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
TRAF3-201ENST00000347662 ATP2B3Q16720 1220 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 SLC4A8Q2Y0W8 1093 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 MRVI1Q9Y6F6 885 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 LMTK3Q96Q04 1460 aa13.56□□□□□ -0.24
TRAF3-201ENST00000347662 USO1O60763 962 aaKnown RBP13.55□□□□□ -0.24
TRAF3-201ENST00000347662 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 HAUS7Q99871 368 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 NLRP5P59047 1200 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 KDM5BQ9UGL1 1544 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 TMEM266Q2M3C6 531 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 FEZ2Q9UHY8 353 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-201ENST00000347662 MVPQ14764 893 aaKnown RBP13.55□□□□□ -0.24
TRAF3-201ENST00000347662 CTR9Q6PD62 1173 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
TRAF3-201ENST00000347662 CPLX3Q8WVH0 158 aa13.55□□□□□ -0.24
TRAF3-201ENST00000347662 RSPH3Q86UC2 560 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 TEX14Q8IWB6 1497 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 FAM83GA6ND36 823 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 DYNC1I1O14576 645 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 DDX46Q7L014 1031 aaKnown RBP13.54□□□□□ -0.24
TRAF3-201ENST00000347662 NCOA1Q15788 1441 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 AAMPQ13685 434 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 CCDC89Q8N998 374 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 GMNNO75496 209 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 ZNF444Q8N0Y2 327 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-201ENST00000347662 NUP62CLQ9H1M0 184 aa13.54□□□□□ -0.24
TRAF3-201ENST00000347662 URI1O94763 535 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 SMARCA5O60264 1052 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 DDB1Q16531 1140 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 KIF5AQ12840 1032 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 ERCC5P28715 1186 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 PROCA1Q8NCQ7 364 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 RAB34Q9BZG1 259 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 NAA15Q9BXJ9 866 aaKnown RBP13.53□□□□□ -0.24
TRAF3-201ENST00000347662 PRDM10Q9NQV6 1147 aa13.53□□□□□ -0.24
TRAF3-201ENST00000347662 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.24
TRAF3-201ENST00000347662 SLC39A6Q13433 755 aa13.52□□□□□ -0.24
TRAF3-201ENST00000347662 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.24
TRAF3-201ENST00000347662 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.24
TRAF3-201ENST00000347662 NBPF4Q96M43 638 aa13.52□□□□□ -0.24
TRAF3-201ENST00000347662 PDRG1Q9NUG6 133 aa13.52□□□□□ -0.24
TRAF3-201ENST00000347662 CRCPO75575 148 aa13.52□□□□□ -0.25
TRAF3-201ENST00000347662 ERCC3P19447 782 aa13.52□□□□□ -0.25
TRAF3-201ENST00000347662 CCDC174Q6PII3 467 aa13.52□□□□□ -0.25
TRAF3-201ENST00000347662 CCDC117Q8IWD4 279 aaPredicted RBP13.52□□□□□ -0.25
TRAF3-201ENST00000347662 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
TRAF3-201ENST00000347662 JAKMIP1Q96N16 626 aaKnown RBP13.52□□□□□ -0.25
TRAF3-201ENST00000347662 AKAP2Q9Y2D5 859 aa13.52□□□□□ -0.25
TRAF3-201ENST00000347662 WDR33Q9C0J8 1336 aaKnown RBP13.52□□□□□ -0.25
TRAF3-201ENST00000347662 GJC1P36383 396 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 NAA25Q14CX7 972 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 GEN1Q17RS7 908 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 CHD1LQ86WJ1 897 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 MTIF2P46199 727 aaKnown RBP13.51□□□□□ -0.25
TRAF3-201ENST00000347662 CCT6BQ92526 530 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 DBF4Q9UBU7 674 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-201ENST00000347662 CTNNA3Q9UI47 895 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 KIF3CO14782 793 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 PHACTR2O75167 634 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 CUL4BQ13620 913 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
TRAF3-201ENST00000347662 VAT1LQ9HCJ6 419 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 MAP3K2Q9Y2U5 619 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 MYO1BO43795 1136 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 RANBP6O60518 1105 aaKnown RBP13.51□□□□□ -0.25
TRAF3-201ENST00000347662 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms