RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 FSD2A1L4K1 749 aa19.23■□□□□ 0.67
RDX-201ENST00000343115 ISM2Q6H9L7 571 aa19.23■□□□□ 0.67
RDX-201ENST00000343115 CEP57L1Q8IYX8 460 aa19.23■□□□□ 0.67
RDX-201ENST00000343115 CTNNA3Q9UI47 895 aa19.23■□□□□ 0.67
RDX-201ENST00000343115 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
RDX-201ENST00000343115 CCDC129Q6ZRS4 1044 aa19.23■□□□□ 0.67
RDX-201ENST00000343115 MPHOSPH8Q99549 860 aa19.23■□□□□ 0.67
RDX-201ENST00000343115 SERPINC1P01008 464 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 CCDC144CPQ8IYA2 1237 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 CCDC112Q8NEF3 446 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 Q6ZUG5 572 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 TFCP2Q12800 502 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 HSP90AB3PQ58FF7 597 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 TTLL5Q6EMB2 1281 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 TTC41PQ6P2S7 1318 aa19.22■□□□□ 0.67
RDX-201ENST00000343115 FSIP1Q8NA03 581 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 PRDM10Q9NQV6 1147 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 CCDC171Q6TFL3 1326 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 GPT2Q8TD30 523 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 C8orf76Q96K31 380 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 TRMT1Q9NXH9 659 aaKnown RBP19.21■□□□□ 0.67
RDX-201ENST00000343115 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 SUCLG2Q96I99 432 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 TIMM10P62072 90 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 MNS1Q8NEH6 495 aa19.21■□□□□ 0.67
RDX-201ENST00000343115 HOOK1Q9UJC3 728 aaKnown RBP19.21■□□□□ 0.67
RDX-201ENST00000343115 SART3Q15020 963 aaKnown RBP19.2■□□□□ 0.66
RDX-201ENST00000343115 C17orf53Q8N3J3 647 aaPredicted RBP19.2■□□□□ 0.66
RDX-201ENST00000343115 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
RDX-201ENST00000343115 ABCF2Q9UG63 623 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 ZNF445P59923 1031 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 IFIT5Q13325 482 aaKnown RBP19.2■□□□□ 0.66
RDX-201ENST00000343115 SSH3Q8TE77 659 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 CLIP2Q9UDT6 1046 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 RAD50Q92878 1312 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 AATKQ6ZMQ8 1374 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 GOLGA8BA8MQT2 603 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 RAD21O60216 631 aa19.2■□□□□ 0.66
RDX-201ENST00000343115 BRD1O95696 1058 aa19.19■□□□□ 0.66
RDX-201ENST00000343115 MTERF4Q7Z6M4 381 aaKnown RBP19.19■□□□□ 0.66
RDX-201ENST00000343115 RASEFQ8IZ41 740 aa19.19■□□□□ 0.66
RDX-201ENST00000343115 CWC25Q9NXE8 425 aaPredicted RBP19.19■□□□□ 0.66
RDX-201ENST00000343115 HSPA4P34932 840 aa19.19■□□□□ 0.66
RDX-201ENST00000343115 ANO6Q4KMQ2 910 aa19.19■□□□□ 0.66
RDX-201ENST00000343115 PTH1RQ03431 593 aa19.19■□□□□ 0.66
RDX-201ENST00000343115 RUFY3Q7L099 469 aa19.19■□□□□ 0.66
RDX-201ENST00000343115 TMOD3Q9NYL9 352 aa19.19■□□□□ 0.66
RDX-201ENST00000343115 TDO2P48775 406 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 DDX19AQ9NUU7 478 aaKnown RBP19.18■□□□□ 0.66
RDX-201ENST00000343115 GLI2P10070 1586 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 LDHAL6AQ6ZMR3 332 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 AIDAQ96BJ3 306 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 DNAJC25Q9H1X3 360 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 MARCH6O60337 910 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 PROSER3Q2NL68 480 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 DBNDD2Q9BQY9 259 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
RDX-201ENST00000343115 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
RDX-201ENST00000343115 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.66
RDX-201ENST00000343115 CCDC186Q7Z3E2 898 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 VPS53Q5VIR6 699 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
RDX-201ENST00000343115 CCAR1Q8IX12 1150 aaKnown RBP19.17■□□□□ 0.66
RDX-201ENST00000343115 PRAMEF22A3QJZ6 481 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 CCDC69A6NI79 296 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 ZNF213O14771 459 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 ZNF790Q6PG37 636 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 TPM1P09493 284 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 HMG20BQ9P0W2 317 aa19.17■□□□□ 0.66
RDX-201ENST00000343115 ORC3Q9UBD5 711 aaPredicted RBP19.17■□□□□ 0.66
RDX-201ENST00000343115 TULP4Q9NRJ4 1543 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 MCMDC2Q4G0Z9 681 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 JMYQ8N9B5 988 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 OFD1O75665 1012 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 APOBRQ0VD83 1088 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 LUZP1Q86V48 1076 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 TRMT112Q9UI30 125 aaKnown RBP19.16■□□□□ 0.66
RDX-201ENST00000343115 PCMTD1Q96MG8 357 aaPredicted RBP19.16■□□□□ 0.66
RDX-201ENST00000343115 KIF2CQ99661 725 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 LRP2BPQ9P2M1 347 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 KIF24Q5T7B8 1368 aa19.16■□□□□ 0.66
RDX-201ENST00000343115 CBX1P83916 185 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 MICU3Q86XE3 530 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
RDX-201ENST00000343115 PDIA4P13667 645 aaKnown RBP19.15■□□□□ 0.66
RDX-201ENST00000343115 TRIM22Q8IYM9 498 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 ARHGEF10O15013 1369 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 STARD3NLO95772 234 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 MCM5P33992 734 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 NSFL1CQ9UNZ2 370 aaKnown RBP19.15■□□□□ 0.66
RDX-201ENST00000343115 ATP7BP35670 1465 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 HMGB1P09429 215 aaKnown RBP19.15■□□□□ 0.66
RDX-201ENST00000343115 UVSSAQ2YD98 709 aa19.15■□□□□ 0.66
RDX-201ENST00000343115 ZNF496Q96IT1 587 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms