RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 ZNF213O14771 459 aa14.03□□□□□ -0.16
CDH5-201ENST00000341529 GADD45BO75293 160 aaPredicted RBP14.03□□□□□ -0.16
CDH5-201ENST00000341529 PRDM15P57071 1507 aaPredicted RBP14.03□□□□□ -0.16
CDH5-201ENST00000341529 NACAP1Q9BZK3 213 aa14.03□□□□□ -0.16
CDH5-201ENST00000341529 SKIDA1Q1XH10 827 aa14.03□□□□□ -0.16
CDH5-201ENST00000341529 Q6ZUG5 572 aa14.03□□□□□ -0.16
CDH5-201ENST00000341529 ZNF594Q96JF6 807 aaPredicted RBP14.03□□□□□ -0.16
CDH5-201ENST00000341529 RNMTO43148 476 aaKnown RBP14.02□□□□□ -0.16
CDH5-201ENST00000341529 CFAP100Q494V2 611 aa14.02□□□□□ -0.16
CDH5-201ENST00000341529 CCDC112Q8NEF3 446 aa14.02□□□□□ -0.16
CDH5-201ENST00000341529 ORC3Q9UBD5 711 aaPredicted RBP14.02□□□□□ -0.16
CDH5-201ENST00000341529 ZFYVE9O95405 1425 aa14.02□□□□□ -0.16
CDH5-201ENST00000341529 C17orf53Q8N3J3 647 aaPredicted RBP14.02□□□□□ -0.17
CDH5-201ENST00000341529 NGLY1Q96IV0 654 aa14.02□□□□□ -0.17
CDH5-201ENST00000341529 PRR36Q9H6K5 1346 aa14.02□□□□□ -0.17
CDH5-201ENST00000341529 PRAMEF22A3QJZ6 481 aa14.02□□□□□ -0.17
CDH5-201ENST00000341529 UBE2HP62256 183 aa14.02□□□□□ -0.17
CDH5-201ENST00000341529 CREB3L3Q68CJ9 461 aa14.02□□□□□ -0.17
CDH5-201ENST00000341529 IP6K1Q92551 441 aa14.02□□□□□ -0.17
CDH5-201ENST00000341529 KDM5DQ9BY66 1539 aa14.02□□□□□ -0.17
CDH5-201ENST00000341529 EDC4Q6P2E9 1401 aaKnown RBP14.02□□□□□ -0.17
CDH5-201ENST00000341529 IPO7O95373 1038 aaKnown RBP14.01□□□□□ -0.17
CDH5-201ENST00000341529 XBP1P17861 261 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
CDH5-201ENST00000341529 DBNDD2Q9BQY9 259 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 F13A1P00488 732 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 ANKRD20A12PQ8NF67 263 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 C19orf44Q9H6X5 657 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 TMEM2Q9UHN6 1383 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 RANBP6O60518 1105 aaKnown RBP14.01□□□□□ -0.17
CDH5-201ENST00000341529 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 ABCC4O15439 1325 aa14.01□□□□□ -0.17
CDH5-201ENST00000341529 A0A0U1RQG5 324 aaPredicted RBP14□□□□□ -0.17
CDH5-201ENST00000341529 A1BGP04217 495 aa14□□□□□ -0.17
CDH5-201ENST00000341529 NAP1L1P55209 391 aaKnown RBP14□□□□□ -0.17
CDH5-201ENST00000341529 HMGN5P82970 282 aaKnown RBP14□□□□□ -0.17
CDH5-201ENST00000341529 APOBRQ0VD83 1088 aa14□□□□□ -0.17
CDH5-201ENST00000341529 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
CDH5-201ENST00000341529 IFIT3O14879 490 aaKnown RBP14□□□□□ -0.17
CDH5-201ENST00000341529 IKQ13123 557 aaPredicted RBP14□□□□□ -0.17
CDH5-201ENST00000341529 FAM89AQ96GI7 184 aa14□□□□□ -0.17
CDH5-201ENST00000341529 SUCLG2Q96I99 432 aa14□□□□□ -0.17
CDH5-201ENST00000341529 RTL1A6NKG5 1358 aa14□□□□□ -0.17
CDH5-201ENST00000341529 KLF18A0A0U1RQI7 1052 aa14□□□□□ -0.17
CDH5-201ENST00000341529 JMYQ8N9B5 988 aa14□□□□□ -0.17
CDH5-201ENST00000341529 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
CDH5-201ENST00000341529 DNAJC25Q9H1X3 360 aa14□□□□□ -0.17
CDH5-201ENST00000341529 BRMS1Q9HCU9 246 aa14□□□□□ -0.17
CDH5-201ENST00000341529 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
CDH5-201ENST00000341529 MARCKSP29966 332 aaPredicted RBP14□□□□□ -0.17
CDH5-201ENST00000341529 PROSER3Q2NL68 480 aa14□□□□□ -0.17
CDH5-201ENST00000341529 CLCN1P35523 988 aa13.99□□□□□ -0.17
CDH5-201ENST00000341529 OTUD7BQ6GQQ9 843 aa13.99□□□□□ -0.17
CDH5-201ENST00000341529 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
CDH5-201ENST00000341529 IGHMBP2P38935 993 aaKnown RBP13.99□□□□□ -0.17
CDH5-201ENST00000341529 CBX1P83916 185 aa13.99□□□□□ -0.17
CDH5-201ENST00000341529 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
CDH5-201ENST00000341529 SNX14Q9Y5W7 946 aa13.99□□□□□ -0.17
CDH5-201ENST00000341529 ALDH1L1O75891 902 aa13.99□□□□□ -0.17
CDH5-201ENST00000341529 ZCRB1Q8TBF4 217 aaKnown RBP13.99□□□□□ -0.17
CDH5-201ENST00000341529 JAG2Q9Y219 1238 aa13.99□□□□□ -0.17
CDH5-201ENST00000341529 LRRIQ1Q96JM4 1722 aa13.99□□□□□ -0.17
CDH5-201ENST00000341529 ANO6Q4KMQ2 910 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 CPLX3Q8WVH0 158 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 TMEM63CQ9P1W3 806 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 PPP1R1BQ9UD71 204 aaPredicted RBP13.98□□□□□ -0.17
CDH5-201ENST00000341529 AKAP2Q9Y2D5 859 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 ANAPC15P60006 121 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 TRIM34Q9BYJ4 488 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 CCDC186Q7Z3E2 898 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 ERCC4Q92889 916 aaPredicted RBP13.98□□□□□ -0.17
CDH5-201ENST00000341529 ROBO2Q9HCK4 1378 aa13.98□□□□□ -0.17
CDH5-201ENST00000341529 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDH5-201ENST00000341529 GNL3LQ9NVN8 582 aaKnown RBP13.97□□□□□ -0.17
CDH5-201ENST00000341529 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
CDH5-201ENST00000341529 SGSM2O43147 1006 aa13.97□□□□□ -0.17
CDH5-201ENST00000341529 GOLGA6L1Q8N7Z2 621 aa13.97□□□□□ -0.17
CDH5-201ENST00000341529 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
CDH5-201ENST00000341529 EIF4A1P60842 406 aaKnown RBP13.97□□□□□ -0.17
CDH5-201ENST00000341529 ZSCAN25Q6NSZ9 544 aa13.97□□□□□ -0.17
CDH5-201ENST00000341529 LUZP1Q86V48 1076 aa13.97□□□□□ -0.17
CDH5-201ENST00000341529 SEC62Q99442 399 aaKnown RBP13.97□□□□□ -0.17
CDH5-201ENST00000341529 ZHX3Q9H4I2 956 aa13.97□□□□□ -0.17
CDH5-201ENST00000341529 PREX2Q70Z35 1606 aa13.96□□□□□ -0.17
CDH5-201ENST00000341529 GOLGA8AA7E2F4 631 aa13.96□□□□□ -0.17
CDH5-201ENST00000341529 TNNT3P45378 269 aaPredicted RBP13.96□□□□□ -0.17
CDH5-201ENST00000341529 PTH1RQ03431 593 aa13.96□□□□□ -0.17
CDH5-201ENST00000341529 MCMDC2Q4G0Z9 681 aa13.96□□□□□ -0.17
CDH5-201ENST00000341529 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.17
CDH5-201ENST00000341529 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
CDH5-201ENST00000341529 CCDC171Q6TFL3 1326 aa13.96□□□□□ -0.17
CDH5-201ENST00000341529 SSBP05455 408 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDH5-201ENST00000341529 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDH5-201ENST00000341529 V9GYY5 206 aaPredicted RBP13.96□□□□□ -0.17
CDH5-201ENST00000341529 PHF23Q9BUL5 403 aaPredicted RBP13.96□□□□□ -0.18
CDH5-201ENST00000341529 SLC26A6Q9BXS9 759 aa13.96□□□□□ -0.18
CDH5-201ENST00000341529 PLEKHG3A1L390 1219 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms