RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 CGNQ9P2M7 1197 aaKnown RBP11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SBNO2Q9Y2G9 1366 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 MYO5CQ9NQX4 1742 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 GOLGA8BA8MQT2 603 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 LIG1P18858 919 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SGSM2O43147 1006 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 BRD1O95696 1058 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TFCP2Q12800 502 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 MTERF4Q7Z6M4 381 aaKnown RBP11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ZNF594Q96JF6 807 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 LARGE1O95461 756 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 METTL24Q5JXM2 366 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 DHX37Q8IY37 1157 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 CCDC34Q96HJ3 373 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ORC3Q9UBD5 711 aaPredicted RBP11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SETD1BQ9UPS6 1966 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 A0A1B0GVL5 298 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 U2AF2P26368 475 aaKnown RBP eCLIP11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 HOXC9P31274 260 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 PROSER3Q2NL68 480 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 AOPEPQ8N6M6 819 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 DBNDD2Q9BQY9 259 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ME3Q16798 604 aa11.49□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SKILP12757 684 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SFPQP23246 707 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 DHX8Q14562 1220 aaKnown RBP11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SLFNL1Q499Z3 407 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 DYNC1I1O14576 645 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 RUFY3Q7L099 469 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 FAM200AQ8TCP9 573 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ORAI2Q96SN7 254 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ANAPC15P60006 121 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
CSGALNACT1-201ENST00000332246 PRDM15P57071 1507 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 LTKP29376 864 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 KRT32Q14532 448 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SUCLG2Q96I99 432 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TDO2P48775 406 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 NRBP1Q9UHY1 535 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 U3KPZ7 1027 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 NAP1L1P55209 391 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TEX35Q5T0J7 233 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 PHF23Q9BUL5 403 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 FTOQ9C0B1 505 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ZDHHC9Q9Y397 364 aa11.47□□□□□ -0.57
CSGALNACT1-201ENST00000332246 CCDC171Q6TFL3 1326 aa11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 GOLGA6L1Q8N7Z2 621 aa11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 HYPKQ9NX55 129 aa11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 A0A0D9SFI3 127 aa11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TPM1P09493 284 aa11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 IMMTQ16891 758 aaKnown RBP11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SPECC1Q5M775 1068 aa11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 UBXN4Q92575 508 aa11.46□□□□□ -0.57
CSGALNACT1-201ENST00000332246 UHRF1BP1LA0JNW5 1464 aa11.46□□□□□ -0.58
CSGALNACT1-201ENST00000332246 POGZQ7Z3K3 1410 aa11.46□□□□□ -0.58
CSGALNACT1-201ENST00000332246 SLC3A2P08195 630 aaKnown RBP11.46□□□□□ -0.58
CSGALNACT1-201ENST00000332246 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 ANO10Q9NW15 660 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 PRR36Q9H6K5 1346 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 METP08581 1390 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 CCDC69A6NI79 296 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 SLC27A2O14975 620 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 HSPA4P34932 840 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 TTC6Q86TZ1 520 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 INTS4Q96HW7 963 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 DDX19AQ9NUU7 478 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 ZCCHC11Q5TAX3 1644 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 YEATS2Q9ULM3 1422 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 ZNF213O14771 459 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 FAM193AP78312 1265 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 LDHAL6AQ6ZMR3 332 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 AIDAQ96BJ3 306 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 LRP2BPQ9P2M1 347 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 PYCARDQ9ULZ3 195 aa11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 KDM5AP29375 1690 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT1-201ENST00000332246 DNA2P51530 1060 aa11.44□□□□□ -0.58
CSGALNACT1-201ENST00000332246 KIF6Q6ZMV9 814 aa11.44□□□□□ -0.58
CSGALNACT1-201ENST00000332246 KIF18AQ8NI77 898 aa11.44□□□□□ -0.58
CSGALNACT1-201ENST00000332246 PPP1R9BQ96SB3 815 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms