RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 KCND1Q9NSA2 647 aa15.09■□□□□ 0.01
CCDC60-201ENST00000327554 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
CCDC60-201ENST00000327554 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
CCDC60-201ENST00000327554 GOLGA6L4A6NEF3 574 aa15.09■□□□□ 0.01
CCDC60-201ENST00000327554 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
CCDC60-201ENST00000327554 NOL10Q9BSC4 688 aaKnown RBP15.09■□□□□ 0.01
CCDC60-201ENST00000327554 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
CCDC60-201ENST00000327554 CAVIN2O95810 425 aa15.08■□□□□ 0.01
CCDC60-201ENST00000327554 POLA2Q14181 598 aa15.08■□□□□ 0.01
CCDC60-201ENST00000327554 FHOD1Q9Y613 1164 aa15.08■□□□□ 0.01
CCDC60-201ENST00000327554 CCDC69A6NI79 296 aa15.08■□□□□ 0
CCDC60-201ENST00000327554 SURF6O75683 361 aaKnown RBP15.08■□□□□ 0
CCDC60-201ENST00000327554 BMS1Q14692 1282 aaKnown RBP15.08■□□□□ 0
CCDC60-201ENST00000327554 RNF20Q5VTR2 975 aa15.08■□□□□ 0
CCDC60-201ENST00000327554 DDX54Q8TDD1 881 aaKnown RBP15.08■□□□□ 0
CCDC60-201ENST00000327554 TRMT1Q9NXH9 659 aaKnown RBP15.08■□□□□ 0
CCDC60-201ENST00000327554 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
CCDC60-201ENST00000327554 FOXO3O43524 673 aa15.07■□□□□ 0
CCDC60-201ENST00000327554 PDCP20941 246 aa15.07■□□□□ 0
CCDC60-201ENST00000327554 HNRNPH2P55795 449 aaKnown RBP15.07■□□□□ 0
CCDC60-201ENST00000327554 UBTFL1P0CB47 393 aaPredicted RBP15.07■□□□□ 0
CCDC60-201ENST00000327554 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
CCDC60-201ENST00000327554 NECTIN1Q15223 517 aa15.07■□□□□ 0
CCDC60-201ENST00000327554 C11orf57Q6ZUT1 292 aaPredicted RBP15.07■□□□□ 0
CCDC60-201ENST00000327554 PPP1R42Q7Z4L9 355 aa15.07■□□□□ 0
CCDC60-201ENST00000327554 L2HGDHQ9H9P8 463 aa15.07■□□□□ 0
CCDC60-201ENST00000327554 MAP3K5Q99683 1374 aa15.07■□□□□ 0
CCDC60-201ENST00000327554 USP42Q9H9J4 1324 aaKnown RBP15.06■□□□□ 0
CCDC60-201ENST00000327554 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.06■□□□□ 0
CCDC60-201ENST00000327554 USP16Q9Y5T5 823 aa15.06■□□□□ 0
CCDC60-201ENST00000327554 SPATA31D1Q6ZQQ2 1576 aa15.06■□□□□ 0
CCDC60-201ENST00000327554 ERCC6LQ2NKX8 1250 aa15.06■□□□□ 0
CCDC60-201ENST00000327554 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
CCDC60-201ENST00000327554 GTF3C6Q969F1 213 aa15.06■□□□□ 0
CCDC60-201ENST00000327554 MYH15Q9Y2K3 1946 aa15.06■□□□□ 0
CCDC60-201ENST00000327554 ADCY9O60503 1353 aa15.06■□□□□ 0
CCDC60-201ENST00000327554 GOLGA6L19H0YKK7 550 aa15.05■□□□□ 0
CCDC60-201ENST00000327554 WASLO00401 505 aaPredicted RBP15.05■□□□□ 0
CCDC60-201ENST00000327554 NPHP1O15259 732 aa15.05■□□□□ 0
CCDC60-201ENST00000327554 LRRN4CLQ8ND94 238 aa15.05■□□□□ 0
CCDC60-201ENST00000327554 BICD2Q8TD16 824 aa15.05■□□□□ 0
CCDC60-201ENST00000327554 LRRC37A3O60309 1634 aa15.05■□□□□ 0
CCDC60-201ENST00000327554 DIP2CQ9Y2E4 1556 aa15.05■□□□□ -0
CCDC60-201ENST00000327554 NCKAP5LQ9HCH0 1330 aa15.05■□□□□ -0
CCDC60-201ENST00000327554 KIF2AO00139 706 aaPredicted RBP15.05■□□□□ -0
CCDC60-201ENST00000327554 PLA2G4AP47712 749 aa15.05■□□□□ -0
CCDC60-201ENST00000327554 CLCN6P51797 869 aa15.05■□□□□ -0
CCDC60-201ENST00000327554 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
CCDC60-201ENST00000327554 PNMA6AP0CW24 399 aaPredicted RBP15.04■□□□□ -0
CCDC60-201ENST00000327554 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
CCDC60-201ENST00000327554 CCDC93Q567U6 631 aa15.04■□□□□ -0
CCDC60-201ENST00000327554 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
CCDC60-201ENST00000327554 FILIP1Q7Z7B0 1213 aa15.04■□□□□ -0
CCDC60-201ENST00000327554 PLCD3Q8N3E9 789 aa15.04■□□□□ -0
CCDC60-201ENST00000327554 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
CCDC60-201ENST00000327554 CREB3L3Q68CJ9 461 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 NECTIN2Q92692 538 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 TRERF1Q96PN7 1200 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 TSPYL1Q9H0U9 437 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 FEZ2Q9UHY8 353 aaPredicted RBP15.03■□□□□ -0
CCDC60-201ENST00000327554 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
CCDC60-201ENST00000327554 GLRX3O76003 335 aaKnown RBP15.03■□□□□ -0
CCDC60-201ENST00000327554 HSP90AB2PQ58FF8 381 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 DHX40Q8IX18 779 aaKnown RBP15.03■□□□□ -0
CCDC60-201ENST00000327554 NUDT16Q96DE0 195 aaKnown RBP15.03■□□□□ -0
CCDC60-201ENST00000327554 RBM8AQ9Y5S9 174 aaKnown RBP15.03■□□□□ -0
CCDC60-201ENST00000327554 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
CCDC60-201ENST00000327554 ZRANB2O95218 330 aaKnown RBP eCLIP15.02■□□□□ -0
CCDC60-201ENST00000327554 ZKSCAN1P17029 563 aaPredicted RBP15.02■□□□□ -0
CCDC60-201ENST00000327554 STX1AQ16623 288 aa15.02■□□□□ -0
CCDC60-201ENST00000327554 SRGAP3O43295 1099 aa15.02□□□□□ -0.01
CCDC60-201ENST00000327554 RAD51AP2Q09MP3 1159 aa15.02□□□□□ -0.01
CCDC60-201ENST00000327554 SNW1Q13573 536 aaKnown RBP15.02□□□□□ -0.01
CCDC60-201ENST00000327554 E4F1Q66K89 784 aaPredicted RBP15.02□□□□□ -0.01
CCDC60-201ENST00000327554 TRIM34Q9BYJ4 488 aa15.02□□□□□ -0.01
CCDC60-201ENST00000327554 MAP3K19Q56UN5 1328 aa15.02□□□□□ -0.01
CCDC60-201ENST00000327554 HTATSF1O43719 755 aaKnown RBP15.01□□□□□ -0.01
CCDC60-201ENST00000327554 RESTQ13127 1097 aa15.01□□□□□ -0.01
CCDC60-201ENST00000327554 PPP1R13BQ96KQ4 1090 aa15.01□□□□□ -0.01
CCDC60-201ENST00000327554 OSBPL5Q9H0X9 879 aaPredicted RBP15.01□□□□□ -0.01
CCDC60-201ENST00000327554 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
CCDC60-201ENST00000327554 TOB2Q14106 344 aaPredicted RBP15□□□□□ -0.01
CCDC60-201ENST00000327554 NBPF11Q86T75 865 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 MAP4K1Q92918 833 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 TCEANC2Q96MN5 208 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC60-201ENST00000327554 OVOS2A0A0J9YW53 1432 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 OVOS2Q6IE36 1432 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 SLC27A2O14975 620 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 GSDMDP57764 484 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 SYT10Q6XYQ8 523 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 ALDH8A1Q9H2A2 487 aaPredicted RBP15□□□□□ -0.01
CCDC60-201ENST00000327554 CCDC61Q9Y6R9 512 aa15□□□□□ -0.01
CCDC60-201ENST00000327554 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
CCDC60-201ENST00000327554 A0A087WWV3 80 aa14.99□□□□□ -0.01
CCDC60-201ENST00000327554 ARHGAP29Q52LW3 1261 aa14.99□□□□□ -0.01
CCDC60-201ENST00000327554 BECN2A8MW95 431 aa14.99□□□□□ -0.01
CCDC60-201ENST00000327554 CTAGE5O15320 804 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms