RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 TTLL7Q6ZT98 887 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 NACAP1Q9BZK3 213 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 NAPBQ9H115 298 aa13.97□□□□□ -0.17
DDR1-223ENST00000324771 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
DDR1-223ENST00000324771 AK2P54819 239 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 FAM173BQ6P4H8 233 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 ARHGEF25Q86VW2 580 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 ZPR1O75312 459 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 CCAR2Q8N163 923 aaKnown RBP13.96□□□□□ -0.17
DDR1-223ENST00000324771 NEK1Q96PY6 1258 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 WWC3Q9ULE0 1092 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
DDR1-223ENST00000324771 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
DDR1-223ENST00000324771 ZNF213O14771 459 aa13.96□□□□□ -0.18
DDR1-223ENST00000324771 POLR3DP05423 398 aaPredicted RBP13.96□□□□□ -0.18
DDR1-223ENST00000324771 IGSF1Q8N6C5 1336 aa13.96□□□□□ -0.18
DDR1-223ENST00000324771 MADDQ8WXG6 1647 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 CD2BP2O95400 341 aaKnown RBP13.95□□□□□ -0.18
DDR1-223ENST00000324771 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 MICU3Q86XE3 530 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 CNPY2Q9Y2B0 182 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 FAM135BQ49AJ0 1406 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 TRIM34Q9BYJ4 488 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 PALD1Q9ULE6 856 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDR1-223ENST00000324771 CEP152O94986 1710 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 DZIP3Q86Y13 1208 aaKnown RBP13.95□□□□□ -0.18
DDR1-223ENST00000324771 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 SPHKAPQ2M3C7 1700 aa13.95□□□□□ -0.18
DDR1-223ENST00000324771 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
DDR1-223ENST00000324771 GCKRQ14397 625 aa13.94□□□□□ -0.18
DDR1-223ENST00000324771 RANBP6O60518 1105 aaKnown RBP13.94□□□□□ -0.18
DDR1-223ENST00000324771 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDR1-223ENST00000324771 PDE4CQ08493 712 aa13.94□□□□□ -0.18
DDR1-223ENST00000324771 PKP1Q13835 747 aa13.94□□□□□ -0.18
DDR1-223ENST00000324771 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 METTL22Q9BUU2 404 aaPredicted RBP13.93□□□□□ -0.18
DDR1-223ENST00000324771 AATKQ6ZMQ8 1374 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 ESPNB1AK53 854 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 RBM25P49756 843 aaKnown RBP13.93□□□□□ -0.18
DDR1-223ENST00000324771 KCNQ4P56696 695 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 SLC9C2Q5TAH2 1124 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 ZSCAN25Q6NSZ9 544 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 SNX21Q969T3 373 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 EAF2Q96CJ1 260 aaPredicted RBP13.93□□□□□ -0.18
DDR1-223ENST00000324771 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
DDR1-223ENST00000324771 NUP62CLQ9H1M0 184 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 ARHGAP31Q2M1Z3 1444 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 PHKG2P15735 406 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 RXRAP19793 462 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
DDR1-223ENST00000324771 GIMAP6Q6P9H5 292 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 FILIP1Q7Z7B0 1213 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
DDR1-223ENST00000324771 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
DDR1-223ENST00000324771 ISM2Q6H9L7 571 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 IRS4O14654 1257 aaPredicted RBP13.92□□□□□ -0.18
DDR1-223ENST00000324771 SMC2O95347 1197 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 CCDC192P0DO97 292 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 BRPF1P55201 1214 aaPredicted RBP13.92□□□□□ -0.18
DDR1-223ENST00000324771 MAP3K12Q12852 859 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 CREB3L3Q68CJ9 461 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
DDR1-223ENST00000324771 SHROOM2Q13796 1616 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 PDILTQ8N807 584 aa13.92□□□□□ -0.18
DDR1-223ENST00000324771 IL15P40933 162 aaPredicted RBP13.91□□□□□ -0.18
DDR1-223ENST00000324771 FAM182BQ5T319 152 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 Q6ZUG5 572 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 PAG1Q9NWQ8 432 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 GLI2P10070 1586 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 IFIT3O14879 490 aaKnown RBP13.91□□□□□ -0.18
DDR1-223ENST00000324771 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.18
DDR1-223ENST00000324771 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 MIGA1Q8NAN2 632 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 SEC62Q99442 399 aaKnown RBP13.91□□□□□ -0.18
DDR1-223ENST00000324771 TEX13AQ9BXU3 409 aaPredicted RBP13.91□□□□□ -0.18
DDR1-223ENST00000324771 SH2B1Q9NRF2 756 aaPredicted RBP13.91□□□□□ -0.18
DDR1-223ENST00000324771 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 A0A1B0GUL7 405 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 SLC5A1P13866 664 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 C8orf76Q96K31 380 aa13.91□□□□□ -0.18
DDR1-223ENST00000324771 ABCA9Q8IUA7 1624 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 BIN1O00499 593 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 TAF5LO75529 589 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 CCDC173Q0VFZ6 552 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 CAVIN4Q5BKX8 364 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 USP48Q86UV5 1035 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 ASAP1Q9ULH1 1129 aa13.9□□□□□ -0.18
DDR1-223ENST00000324771 PPRC1Q5VV67 1664 aaKnown RBP13.9□□□□□ -0.18
DDR1-223ENST00000324771 CFAP74Q9C0B2 1584 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms