RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ADAMTSL1Q8N6G6 1762 aa18.79■□□□□ 0.6
RPP40-201ENST00000319533 ITGBL1O95965 494 aaPredicted RBP18.79■□□□□ 0.6
RPP40-201ENST00000319533 ZNF34Q8IZ26 560 aa18.79■□□□□ 0.6
RPP40-201ENST00000319533 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
RPP40-201ENST00000319533 HACL1Q9UJ83 578 aa18.79■□□□□ 0.6
RPP40-201ENST00000319533 GRIPAP1Q4V328 841 aa18.78■□□□□ 0.6
RPP40-201ENST00000319533 SUSD4Q5VX71 490 aa18.78■□□□□ 0.6
RPP40-201ENST00000319533 LRP10Q7Z4F1 713 aa18.78■□□□□ 0.6
RPP40-201ENST00000319533 TNS4Q8IZW8 715 aa18.78■□□□□ 0.6
RPP40-201ENST00000319533 MYL6BP14649 208 aa18.77■□□□□ 0.6
RPP40-201ENST00000319533 GIGYF2Q6Y7W6 1299 aaKnown RBP18.77■□□□□ 0.6
RPP40-201ENST00000319533 GPC2Q8N158 579 aa18.77■□□□□ 0.6
RPP40-201ENST00000319533 CRAMP1Q96RY5 1269 aa18.77■□□□□ 0.6
RPP40-201ENST00000319533 CNTNAP1P78357 1384 aa18.77■□□□□ 0.6
RPP40-201ENST00000319533 NTSR2O95665 410 aa18.76■□□□□ 0.59
RPP40-201ENST00000319533 EPHX2P34913 555 aa18.76■□□□□ 0.59
RPP40-201ENST00000319533 PNMA8AQ86V59 439 aaPredicted RBP18.76■□□□□ 0.59
RPP40-201ENST00000319533 ZBTB3Q9H5J0 574 aa18.76■□□□□ 0.59
RPP40-201ENST00000319533 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
RPP40-201ENST00000319533 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
RPP40-201ENST00000319533 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
RPP40-201ENST00000319533 GPTP24298 496 aa18.75■□□□□ 0.59
RPP40-201ENST00000319533 PDIA6Q15084 440 aa18.75■□□□□ 0.59
RPP40-201ENST00000319533 COL4A5P29400 1685 aa18.75■□□□□ 0.59
RPP40-201ENST00000319533 TMEM88BA6NKF7 163 aa18.74■□□□□ 0.59
RPP40-201ENST00000319533 PARP10Q53GL7 1025 aa18.74■□□□□ 0.59
RPP40-201ENST00000319533 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
RPP40-201ENST00000319533 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
RPP40-201ENST00000319533 JDP2Q8WYK2 163 aa18.74■□□□□ 0.59
RPP40-201ENST00000319533 RPGRQ92834 1020 aaKnown RBP18.74■□□□□ 0.59
RPP40-201ENST00000319533 RBM17Q96I25 401 aaKnown RBP18.74■□□□□ 0.59
RPP40-201ENST00000319533 RNF123Q5XPI4 1314 aa18.74■□□□□ 0.59
RPP40-201ENST00000319533 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
RPP40-201ENST00000319533 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
RPP40-201ENST00000319533 C3orf67Q6ZVT6 689 aa18.72■□□□□ 0.59
RPP40-201ENST00000319533 PPEF1O14829 653 aaPredicted RBP18.71■□□□□ 0.59
RPP40-201ENST00000319533 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
RPP40-201ENST00000319533 RIPK4P57078 832 aa18.71■□□□□ 0.59
RPP40-201ENST00000319533 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
RPP40-201ENST00000319533 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
RPP40-201ENST00000319533 RALBP1Q15311 655 aa18.7■□□□□ 0.58
RPP40-201ENST00000319533 NLRP3Q96P20 1036 aa18.7■□□□□ 0.58
RPP40-201ENST00000319533 VPS33BQ9H267 617 aa18.7■□□□□ 0.58
RPP40-201ENST00000319533 LTBP1Q14766 1721 aa18.69■□□□□ 0.58
RPP40-201ENST00000319533 RASSF10A6NK89 507 aa18.69■□□□□ 0.58
RPP40-201ENST00000319533 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
RPP40-201ENST00000319533 VEGFBP49765 207 aa18.69■□□□□ 0.58
RPP40-201ENST00000319533 PROSER3Q2NL68 480 aa18.69■□□□□ 0.58
RPP40-201ENST00000319533 SLC51AQ86UW1 340 aa18.69■□□□□ 0.58
RPP40-201ENST00000319533 UTP14AQ9BVJ6 771 aaKnown RBP18.69■□□□□ 0.58
RPP40-201ENST00000319533 ATP6V0A2Q9Y487 856 aa18.69■□□□□ 0.58
RPP40-201ENST00000319533 EIF2S2P20042 333 aaKnown RBP18.68■□□□□ 0.58
RPP40-201ENST00000319533 SCNN1DP51172 638 aa18.68■□□□□ 0.58
RPP40-201ENST00000319533 LMOD3Q0VAK6 560 aa18.68■□□□□ 0.58
RPP40-201ENST00000319533 MAP1SQ66K74 1059 aaPredicted RBP18.68■□□□□ 0.58
RPP40-201ENST00000319533 LARGE2Q8N3Y3 721 aa18.68■□□□□ 0.58
RPP40-201ENST00000319533 FOXN1O15353 648 aa18.67■□□□□ 0.58
RPP40-201ENST00000319533 RTFDC1Q9BY42 306 aaPredicted RBP18.67■□□□□ 0.58
RPP40-201ENST00000319533 PRDM10Q9NQV6 1147 aa18.67■□□□□ 0.58
RPP40-201ENST00000319533 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
RPP40-201ENST00000319533 LMOD1P29536 600 aaPredicted RBP18.66■□□□□ 0.58
RPP40-201ENST00000319533 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
RPP40-201ENST00000319533 WBP1LQ9NX94 342 aa18.66■□□□□ 0.58
RPP40-201ENST00000319533 ANKRD36CQ5JPF3 1778 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 CHL1O00533 1208 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 CAPN15O75808 1086 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 BBOX1O75936 387 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 ANXA1P04083 346 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 EPS15P42566 896 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 USP50Q70EL3 339 aaPredicted RBP18.65■□□□□ 0.58
RPP40-201ENST00000319533 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 NLRP10Q86W26 655 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 NIM1KQ8IY84 436 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 DDX21Q9NR30 783 aaKnown RBP eCLIP18.65■□□□□ 0.58
RPP40-201ENST00000319533 ABCC4O15439 1325 aa18.65■□□□□ 0.58
RPP40-201ENST00000319533 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
RPP40-201ENST00000319533 PPIP5K2O43314 1243 aa18.64■□□□□ 0.57
RPP40-201ENST00000319533 DEFB115Q30KQ5 88 aa18.64■□□□□ 0.57
RPP40-201ENST00000319533 SP8Q8IXZ3 490 aa18.64■□□□□ 0.57
RPP40-201ENST00000319533 CTCFP49711 727 aaPredicted RBP18.63■□□□□ 0.57
RPP40-201ENST00000319533 TCIRG1Q13488 830 aa18.63■□□□□ 0.57
RPP40-201ENST00000319533 AOC3Q16853 763 aa18.63■□□□□ 0.57
RPP40-201ENST00000319533 SUPT20HQ8NEM7 779 aa18.63■□□□□ 0.57
RPP40-201ENST00000319533 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
RPP40-201ENST00000319533 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
RPP40-201ENST00000319533 LAMB2P55268 1798 aa18.63■□□□□ 0.57
RPP40-201ENST00000319533 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
RPP40-201ENST00000319533 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
RPP40-201ENST00000319533 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
RPP40-201ENST00000319533 AIMP1Q12904 312 aaKnown RBP18.61■□□□□ 0.57
RPP40-201ENST00000319533 AIDAQ96BJ3 306 aa18.61■□□□□ 0.57
RPP40-201ENST00000319533 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
RPP40-201ENST00000319533 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
RPP40-201ENST00000319533 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
RPP40-201ENST00000319533 WDR33Q9C0J8 1336 aaKnown RBP18.6■□□□□ 0.57
RPP40-201ENST00000319533 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
RPP40-201ENST00000319533 CXCL9Q07325 125 aa18.6■□□□□ 0.57
RPP40-201ENST00000319533 KIAA2012Q0VF49 1180 aa18.6■□□□□ 0.57
RPP40-201ENST00000319533 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
RPP40-201ENST00000319533 ADARB2Q9NS39 739 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms