RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 DDX17Q92841 729 aaKnown RBP21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 ALKQ9UM73 1620 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 CCDC171Q6TFL3 1326 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 KIF24Q5T7B8 1368 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 HSP90AB3PQ58FF7 597 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 MROH2AA6NES4 1674 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 TSPOAP1O95153 1857 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 ALDH1L1O75891 902 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 TSC1Q92574 1164 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 CHMP4CQ96CF2 233 aa21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 CDK12Q9NYV4 1490 aaPredicted RBP21.67■■□□□ 1.06
CDK5R1-201ENST00000313401 IDH1O75874 414 aaKnown RBP21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 ZNF165P49910 485 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 CFAP45Q9UL16 551 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 TFCP2Q12800 502 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 ISM2Q6H9L7 571 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 BIN1O00499 593 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 Q6ZUG5 572 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 CCDC82Q8N4S0 544 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 ZDHHC9Q9Y397 364 aa21.66■■□□□ 1.06
CDK5R1-201ENST00000313401 POLR3DP05423 398 aaPredicted RBP21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 RUFY3Q7L099 469 aa21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 NOL7Q9UMY1 257 aaKnown RBP21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 ARHGAP31Q2M1Z3 1444 aa21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 ARHGEF10O15013 1369 aa21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 GPTP24298 496 aa21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 LUZP1Q86V48 1076 aa21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 NRXN1Q9ULB1 1477 aa21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 TTC41PQ6P2S7 1318 aa21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 NOLC1Q14978 699 aaKnown RBP eCLIP21.65■■□□□ 1.06
CDK5R1-201ENST00000313401 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.06
CDK5R1-201ENST00000313401 USP6P35125 1406 aa21.64■■□□□ 1.06
CDK5R1-201ENST00000313401 ANO6Q4KMQ2 910 aa21.64■■□□□ 1.06
CDK5R1-201ENST00000313401 EAF2Q96CJ1 260 aaPredicted RBP21.64■■□□□ 1.06
CDK5R1-201ENST00000313401 ZNF396Q96N95 335 aaPredicted RBP21.64■■□□□ 1.06
CDK5R1-201ENST00000313401 OSBPL3Q9H4L5 887 aa21.64■■□□□ 1.06
CDK5R1-201ENST00000313401 IGSF1Q8N6C5 1336 aa21.64■■□□□ 1.05
CDK5R1-201ENST00000313401 PES1O00541 588 aaKnown RBP21.64■■□□□ 1.05
CDK5R1-201ENST00000313401 BEND3Q5T5X7 828 aa21.64■■□□□ 1.05
CDK5R1-201ENST00000313401 RASSF8Q8NHQ8 419 aa21.64■■□□□ 1.05
CDK5R1-201ENST00000313401 CDK11BP21127 795 aaKnown RBP21.64■■□□□ 1.05
CDK5R1-201ENST00000313401 TIMM10P62072 90 aa21.64■■□□□ 1.05
CDK5R1-201ENST00000313401 TRMT1Q9NXH9 659 aaKnown RBP21.64■■□□□ 1.05
CDK5R1-201ENST00000313401 CAMSAP1Q5T5Y3 1602 aa21.63■■□□□ 1.05
CDK5R1-201ENST00000313401 NEXMIFQ5QGS0 1516 aa21.63■■□□□ 1.05
CDK5R1-201ENST00000313401 ARHGEF40Q8TER5 1519 aa21.63■■□□□ 1.05
CDK5R1-201ENST00000313401 DNAJC25Q9H1X3 360 aa21.63■■□□□ 1.05
CDK5R1-201ENST00000313401 MYOM1P52179 1685 aa21.63■■□□□ 1.05
CDK5R1-201ENST00000313401 MAP7D2Q96T17 732 aa21.63■■□□□ 1.05
CDK5R1-201ENST00000313401 CBX1P83916 185 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 ME3Q16798 604 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 CCDC186Q7Z3E2 898 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 IFNL2Q8IZJ0 200 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 PPP1R9BQ96SB3 815 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 LMTK2Q8IWU2 1503 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 VPS53Q5VIR6 699 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 FAM177A1Q8N128 213 aaPredicted RBP21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 DBNDD2Q9BQY9 259 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 NLRP1Q9C000 1473 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 CCDC144CPQ8IYA2 1237 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 PDILTQ8N807 584 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 MTMR7Q9Y216 660 aa21.62■■□□□ 1.05
CDK5R1-201ENST00000313401 SNRPA1P09661 255 aaKnown RBP21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 AKAP17AQ02040 695 aaKnown RBP21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 TLR7Q9NYK1 1049 aaKnown RBP21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 LARGE1O95461 756 aa21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 CDC37L1Q7L3B6 337 aa21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 PDCL3Q9H2J4 239 aa21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 DDX21Q9NR30 783 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 SLC27A2O14975 620 aa21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 CLIP2Q9UDT6 1046 aa21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 TPM3P06753 285 aa21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 U3KPZ7 1027 aaPredicted RBP21.61■■□□□ 1.05
CDK5R1-201ENST00000313401 A0A0D9SFI3 127 aa21.6■■□□□ 1.05
CDK5R1-201ENST00000313401 JAK2O60674 1132 aa21.6■■□□□ 1.05
CDK5R1-201ENST00000313401 NAT10Q9H0A0 1025 aaKnown RBP21.6■■□□□ 1.05
CDK5R1-201ENST00000313401 FSIP1Q8NA03 581 aa21.6■■□□□ 1.05
CDK5R1-201ENST00000313401 SIRT1Q96EB6 747 aa21.6■■□□□ 1.05
CDK5R1-201ENST00000313401 SEC62Q99442 399 aaKnown RBP21.6■■□□□ 1.05
CDK5R1-201ENST00000313401 APOBRQ0VD83 1088 aa21.6■■□□□ 1.05
CDK5R1-201ENST00000313401 KIF6Q6ZMV9 814 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 GIGYF1O75420 1035 aaPredicted RBP21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 TYRO3Q06418 890 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 ZNF790Q6PG37 636 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 STAP2Q9UGK3 403 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 MED14O60244 1454 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 PTGS1P23219 599 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 METTL24Q5JXM2 366 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 CCDC112Q8NEF3 446 aa21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 ZNF496Q96IT1 587 aaPredicted RBP21.59■■□□□ 1.05
CDK5R1-201ENST00000313401 MCM5P33992 734 aa21.58■■□□□ 1.05
CDK5R1-201ENST00000313401 ZNF771Q7L3S4 317 aaPredicted RBP21.58■■□□□ 1.05
CDK5R1-201ENST00000313401 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.05
CDK5R1-201ENST00000313401 CCAR1Q8IX12 1150 aaKnown RBP21.58■■□□□ 1.05
CDK5R1-201ENST00000313401 LSG1Q9H089 658 aaKnown RBP21.58■■□□□ 1.05
CDK5R1-201ENST00000313401 IL25Q9H293 177 aa21.58■■□□□ 1.05
CDK5R1-201ENST00000313401 NCOA5Q9HCD5 579 aaKnown RBP21.58■■□□□ 1.04
CDK5R1-201ENST00000313401 CPS1P31327 1500 aa21.58■■□□□ 1.04
CDK5R1-201ENST00000313401 UBE2Q2Q8WVN8 375 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms