RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 FLT4P35916 1363 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 MCM5P33992 734 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 MAP3K4Q9Y6R4 1608 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 ZFYVE16Q7Z3T8 1539 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 FAM200AQ8TCP9 573 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 ANKRD24Q8TF21 1146 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
PHTF2-203ENST00000307305 UNC13BO14795 1591 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 LMBR1LQ6UX01 489 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 CNNM1Q9NRU3 951 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 MYOM2P54296 1465 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 RXRAP19793 462 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 GPTP24298 496 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 RAD50Q92878 1312 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 UHRF1BP1LA0JNW5 1464 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 CCDC57Q2TAC2 916 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 CFAP100Q494V2 611 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 CCDC171Q6TFL3 1326 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 ATF3P18847 181 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
PHTF2-203ENST00000307305 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
PHTF2-203ENST00000307305 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
PHTF2-203ENST00000307305 TNNT3P45378 269 aaPredicted RBP13.3□□□□□ -0.28
PHTF2-203ENST00000307305 TFCP2Q12800 502 aa13.3□□□□□ -0.28
PHTF2-203ENST00000307305 CCDC158Q5M9N0 1113 aa13.3□□□□□ -0.28
PHTF2-203ENST00000307305 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
PHTF2-203ENST00000307305 U2AF2P26368 475 aaKnown RBP eCLIP13.3□□□□□ -0.282e-11■■■■■ 42.1
PHTF2-203ENST00000307305 KRT32Q14532 448 aa13.3□□□□□ -0.28
PHTF2-203ENST00000307305 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
PHTF2-203ENST00000307305 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
PHTF2-203ENST00000307305 SUCLG2Q96I99 432 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 IL25Q9H293 177 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 UVSSAQ2YD98 709 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 C8orf76Q96K31 380 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 USP16Q9Y5T5 823 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 KLHL10Q6JEL2 608 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 EAF2Q96CJ1 260 aaPredicted RBP13.29□□□□□ -0.28
PHTF2-203ENST00000307305 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 TLR7Q9NYK1 1049 aaKnown RBP13.29□□□□□ -0.28
PHTF2-203ENST00000307305 ZCCHC11Q5TAX3 1644 aaKnown RBP13.29□□□□□ -0.28
PHTF2-203ENST00000307305 A0A0D9SFI3 127 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 HS1BP3Q53T59 392 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 NRBP1Q9UHY1 535 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 TPCN1Q9ULQ1 816 aa13.29□□□□□ -0.28
PHTF2-203ENST00000307305 SLC27A2O14975 620 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 SKILP12757 684 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 DBNDD2Q9BQY9 259 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 GOLGA8BA8MQT2 603 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 TTC6Q86TZ1 520 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
PHTF2-203ENST00000307305 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 CHD1O14646 1710 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 LMOD1P29536 600 aaPredicted RBP13.28□□□□□ -0.28
PHTF2-203ENST00000307305 TNRQ92752 1358 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 SPHKAPQ2M3C7 1700 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 ZMYM3Q14202 1370 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 A0A1B0GVL5 298 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
PHTF2-203ENST00000307305 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 CPLX3Q8WVH0 158 aa13.28□□□□□ -0.28
PHTF2-203ENST00000307305 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.28
PHTF2-203ENST00000307305 PDE4CQ08493 712 aa13.27□□□□□ -0.28
PHTF2-203ENST00000307305 POLR3GO15318 223 aaPredicted RBP13.27□□□□□ -0.29
PHTF2-203ENST00000307305 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.29
PHTF2-203ENST00000307305 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
PHTF2-203ENST00000307305 VPS53Q5VIR6 699 aa13.27□□□□□ -0.29
PHTF2-203ENST00000307305 SSH3Q8TE77 659 aa13.27□□□□□ -0.29
PHTF2-203ENST00000307305 MTMR6Q9Y217 621 aa13.27□□□□□ -0.29
PHTF2-203ENST00000307305 SFPQP23246 707 aaKnown RBP eCLIP13.27□□□□□ -0.29
PHTF2-203ENST00000307305 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
PHTF2-203ENST00000307305 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
PHTF2-203ENST00000307305 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
PHTF2-203ENST00000307305 SLFNL1Q499Z3 407 aa13.27□□□□□ -0.29
PHTF2-203ENST00000307305 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
PHTF2-203ENST00000307305 CBX8Q9HC52 389 aa13.27□□□□□ -0.29
PHTF2-203ENST00000307305 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
PHTF2-203ENST00000307305 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
PHTF2-203ENST00000307305 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
PHTF2-203ENST00000307305 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
PHTF2-203ENST00000307305 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
PHTF2-203ENST00000307305 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
PHTF2-203ENST00000307305 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
PHTF2-203ENST00000307305 ZFP91Q96JP5 570 aaPredicted RBP13.26□□□□□ -0.29
PHTF2-203ENST00000307305 PRIMPOLQ96LW4 560 aa13.26□□□□□ -0.29
PHTF2-203ENST00000307305 EIF4A1P60842 406 aaKnown RBP13.25□□□□□ -0.29
PHTF2-203ENST00000307305 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
PHTF2-203ENST00000307305 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
PHTF2-203ENST00000307305 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
PHTF2-203ENST00000307305 ANO10Q9NW15 660 aa13.25□□□□□ -0.29
PHTF2-203ENST00000307305 NR1I2O75469 434 aa13.25□□□□□ -0.29
PHTF2-203ENST00000307305 IBTKQ9P2D0 1353 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms