RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 CHMLP26374 656 aa21.28■■□□□ 1
RETREG1-201ENST00000306320 EIF4A1P60842 406 aaKnown RBP21.28■■□□□ 1
RETREG1-201ENST00000306320 CERS3Q8IU89 383 aa21.28■■□□□ 1
RETREG1-201ENST00000306320 GJB2P29033 226 aa21.27■■□□□ 1
RETREG1-201ENST00000306320 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
RETREG1-201ENST00000306320 BICD2Q8TD16 824 aa21.27■■□□□ 1
RETREG1-201ENST00000306320 AKAP12Q02952 1782 aa21.26■□□□□ 0.99
RETREG1-201ENST00000306320 ARID5BQ14865 1188 aa21.26■□□□□ 0.99
RETREG1-201ENST00000306320 ANO6Q4KMQ2 910 aa21.26■□□□□ 0.99
RETREG1-201ENST00000306320 TMEM51Q9NW97 253 aa21.26■□□□□ 0.99
RETREG1-201ENST00000306320 OGFRQ9NZT2 677 aa21.26■□□□□ 0.99
RETREG1-201ENST00000306320 LARGE1O95461 756 aa21.26■□□□□ 0.99
RETREG1-201ENST00000306320 F13A1P00488 732 aa21.25■□□□□ 0.99
RETREG1-201ENST00000306320 GTF2F1P35269 517 aaKnown RBP eCLIP21.25■□□□□ 0.99
RETREG1-201ENST00000306320 DNAAF4Q8WXU2 420 aa21.25■□□□□ 0.99
RETREG1-201ENST00000306320 TNMDQ9H2S6 317 aa21.25■□□□□ 0.99
RETREG1-201ENST00000306320 KDRP35968 1356 aa21.25■□□□□ 0.99
RETREG1-201ENST00000306320 GTF3C6Q969F1 213 aa21.24■□□□□ 0.99
RETREG1-201ENST00000306320 SPTLC3Q9NUV7 552 aa21.24■□□□□ 0.99
RETREG1-201ENST00000306320 KRT28Q7Z3Y7 464 aa21.24■□□□□ 0.99
RETREG1-201ENST00000306320 NUP62CLQ9H1M0 184 aa21.24■□□□□ 0.99
RETREG1-201ENST00000306320 NDUFB9Q9Y6M9 179 aa21.24■□□□□ 0.99
RETREG1-201ENST00000306320 LIG1P18858 919 aa21.24■□□□□ 0.99
RETREG1-201ENST00000306320 DNAJC25Q9H1X3 360 aa21.24■□□□□ 0.99
RETREG1-201ENST00000306320 TCHHQ07283 1943 aa21.23■□□□□ 0.99
RETREG1-201ENST00000306320 CUL4AQ13619 759 aa21.23■□□□□ 0.99
RETREG1-201ENST00000306320 RHPN1Q8TCX5 695 aa21.23■□□□□ 0.99
RETREG1-201ENST00000306320 CLIP2Q9UDT6 1046 aa21.23■□□□□ 0.99
RETREG1-201ENST00000306320 JAKMIP1Q96N16 626 aaKnown RBP21.23■□□□□ 0.99
RETREG1-201ENST00000306320 CCDC8Q9H0W5 538 aaPredicted RBP21.23■□□□□ 0.99
RETREG1-201ENST00000306320 DACT1Q9NYF0 836 aa21.23■□□□□ 0.99
RETREG1-201ENST00000306320 PLEKHO1Q53GL0 409 aaPredicted RBP21.23■□□□□ 0.99
RETREG1-201ENST00000306320 RASEFQ8IZ41 740 aa21.23■□□□□ 0.99
RETREG1-201ENST00000306320 ZNF330Q9Y3S2 320 aaPredicted RBP21.23■□□□□ 0.99
RETREG1-201ENST00000306320 ELF2Q15723 593 aa21.22■□□□□ 0.99
RETREG1-201ENST00000306320 MAP3K11Q16584 847 aa21.22■□□□□ 0.99
RETREG1-201ENST00000306320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.22■□□□□ 0.99
RETREG1-201ENST00000306320 POLR3GO15318 223 aaPredicted RBP21.22■□□□□ 0.99
RETREG1-201ENST00000306320 TYRO3Q06418 890 aa21.22■□□□□ 0.99
RETREG1-201ENST00000306320 ATP6V1DQ9Y5K8 247 aa21.22■□□□□ 0.99
RETREG1-201ENST00000306320 ZNF215Q9UL58 517 aaPredicted RBP21.21■□□□□ 0.99
RETREG1-201ENST00000306320 ERCC4Q92889 916 aaPredicted RBP21.21■□□□□ 0.99
RETREG1-201ENST00000306320 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.21■□□□□ 0.99
RETREG1-201ENST00000306320 LARP1BQ659C4 914 aaKnown RBP21.21■□□□□ 0.99
RETREG1-201ENST00000306320 CEP135Q66GS9 1140 aa21.21■□□□□ 0.99
RETREG1-201ENST00000306320 NFATC2IPQ8NCF5 419 aa21.21■□□□□ 0.99
RETREG1-201ENST00000306320 INTS4Q96HW7 963 aaKnown RBP21.21■□□□□ 0.99
RETREG1-201ENST00000306320 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
RETREG1-201ENST00000306320 RNMTO43148 476 aaKnown RBP21.2■□□□□ 0.98
RETREG1-201ENST00000306320 CTNNA3Q9UI47 895 aa21.2■□□□□ 0.98
RETREG1-201ENST00000306320 USP27XA6NNY8 438 aa21.19■□□□□ 0.98
RETREG1-201ENST00000306320 HSPA2P54652 639 aa21.19■□□□□ 0.98
RETREG1-201ENST00000306320 ANKRD7Q92527 254 aa21.19■□□□□ 0.98
RETREG1-201ENST00000306320 GOLGA6L19H0YKK7 550 aa21.19■□□□□ 0.98
RETREG1-201ENST00000306320 PIK3C2AO00443 1686 aa21.19■□□□□ 0.98
RETREG1-201ENST00000306320 BEND3Q5T5X7 828 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 RUFY3Q7L099 469 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 FEZ1Q99689 392 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 PTCD1O75127 700 aaKnown RBP21.18■□□□□ 0.98
RETREG1-201ENST00000306320 FAM200AQ8TCP9 573 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 FMNL2Q96PY5 1086 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 CBX8Q9HC52 389 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 LIMCH1Q9UPQ0 1083 aa21.18■□□□□ 0.98
RETREG1-201ENST00000306320 IRX5P78411 483 aaPredicted RBP21.17■□□□□ 0.98
RETREG1-201ENST00000306320 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
RETREG1-201ENST00000306320 CACTINQ8WUQ7 758 aaKnown RBP21.17■□□□□ 0.98
RETREG1-201ENST00000306320 DDX11Q96FC9 970 aa21.17■□□□□ 0.98
RETREG1-201ENST00000306320 ZNF165P49910 485 aa21.17■□□□□ 0.98
RETREG1-201ENST00000306320 KRT222Q8N1A0 295 aa21.17■□□□□ 0.98
RETREG1-201ENST00000306320 EDC3Q96F86 508 aaKnown RBP21.17■□□□□ 0.98
RETREG1-201ENST00000306320 KIF24Q5T7B8 1368 aa21.17■□□□□ 0.98
RETREG1-201ENST00000306320 ZSCAN25Q6NSZ9 544 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 USP16Q9Y5T5 823 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 SNX14Q9Y5W7 946 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 CCDC66A2RUB6 948 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 SMTNL1A8MU46 457 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 BECN2A8MW95 431 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 HTATSF1O43719 755 aaKnown RBP21.16■□□□□ 0.98
RETREG1-201ENST00000306320 TNNT3P45378 269 aaPredicted RBP21.16■□□□□ 0.98
RETREG1-201ENST00000306320 TRIM34Q9BYJ4 488 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 CHGBP05060 677 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 PTPN14Q15678 1187 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
RETREG1-201ENST00000306320 RPAP1Q9BWH6 1393 aaPredicted RBP21.15■□□□□ 0.98
RETREG1-201ENST00000306320 TTC6Q86TZ1 520 aa21.15■□□□□ 0.98
RETREG1-201ENST00000306320 AACSQ86V21 672 aa21.15■□□□□ 0.98
RETREG1-201ENST00000306320 FAM177A1Q8N128 213 aaPredicted RBP21.15■□□□□ 0.98
RETREG1-201ENST00000306320 PDRG1Q9NUG6 133 aa21.15■□□□□ 0.98
RETREG1-201ENST00000306320 KCNH5Q8NCM2 988 aa21.15■□□□□ 0.98
RETREG1-201ENST00000306320 RAPGEF4Q8WZA2 1011 aa21.15■□□□□ 0.98
RETREG1-201ENST00000306320 TMX1Q9H3N1 280 aa21.15■□□□□ 0.98
RETREG1-201ENST00000306320 NRKQ7Z2Y5 1582 aa21.14■□□□□ 0.98
RETREG1-201ENST00000306320 CCDC144BQ3MJ40 725 aa21.14■□□□□ 0.98
RETREG1-201ENST00000306320 CDC37L1Q7L3B6 337 aa21.14■□□□□ 0.98
RETREG1-201ENST00000306320 ARHGEF25Q86VW2 580 aa21.14■□□□□ 0.98
RETREG1-201ENST00000306320 CCDC144CPQ8IYA2 1237 aa21.14■□□□□ 0.98
RETREG1-201ENST00000306320 BOLA2Q9H3K6 86 aa21.14■□□□□ 0.98
RETREG1-201ENST00000306320 KRT85P78386 507 aa21.14■□□□□ 0.97
RETREG1-201ENST00000306320 ADCK5Q3MIX3 580 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms