RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 TMOD2Q9NZR1 351 aa13.16□□□□□ -0.3
EPB42-201ENST00000300215 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 MAP9Q49MG5 647 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 SPTY2D1Q68D10 685 aaPredicted RBP13.15□□□□□ -0.3
EPB42-201ENST00000300215 VPS36Q86VN1 386 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 JARID2Q92833 1246 aaPredicted RBP13.15□□□□□ -0.3
EPB42-201ENST00000300215 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
EPB42-201ENST00000300215 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
EPB42-201ENST00000300215 ABCC11Q96J66 1382 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 NLRP5P59047 1200 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 TBC1D32Q96NH3 1257 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
EPB42-201ENST00000300215 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
EPB42-201ENST00000300215 SPATA31E1Q6ZUB1 1445 aa13.15□□□□□ -0.3
EPB42-201ENST00000300215 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.31
EPB42-201ENST00000300215 MTIF2P46199 727 aaKnown RBP13.15□□□□□ -0.31
EPB42-201ENST00000300215 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.31
EPB42-201ENST00000300215 NECAB1Q8N987 351 aa13.15□□□□□ -0.31
EPB42-201ENST00000300215 CTNNBL1Q8WYA6 563 aaPredicted RBP13.15□□□□□ -0.31
EPB42-201ENST00000300215 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.31
EPB42-201ENST00000300215 NEBLO76041 1014 aa13.14□□□□□ -0.31
EPB42-201ENST00000300215 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
EPB42-201ENST00000300215 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
EPB42-201ENST00000300215 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
EPB42-201ENST00000300215 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
EPB42-201ENST00000300215 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
EPB42-201ENST00000300215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
EPB42-201ENST00000300215 ZHX1Q9UKY1 873 aaPredicted RBP13.14□□□□□ -0.31
EPB42-201ENST00000300215 USO1O60763 962 aaKnown RBP13.14□□□□□ -0.31
EPB42-201ENST00000300215 LDHAL6AQ6ZMR3 332 aa13.14□□□□□ -0.31
EPB42-201ENST00000300215 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
EPB42-201ENST00000300215 ANKIB1Q9P2G1 1089 aa13.14□□□□□ -0.31
EPB42-201ENST00000300215 YEATS4O95619 227 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 GNG11P61952 73 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 ATP7AQ04656 1500 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 NSD2O96028 1365 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 ABCA8O94911 1581 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 BRF1Q92994 677 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 LRRC2Q9BYS8 371 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 RIMS2Q9UQ26 1411 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 UHRF1BP1LA0JNW5 1464 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 UBA7P41226 1012 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
EPB42-201ENST00000300215 EVI5LQ96CN4 794 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 TSG101Q99816 390 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 VAT1LQ9HCJ6 419 aa13.13□□□□□ -0.31
EPB42-201ENST00000300215 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
EPB42-201ENST00000300215 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
EPB42-201ENST00000300215 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 RNF187Q5TA31 235 aaPredicted RBP13.12□□□□□ -0.31
EPB42-201ENST00000300215 TMX3Q96JJ7 454 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 DESP17661 470 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 GSDMDP57764 484 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 UBE2HP62256 183 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
EPB42-201ENST00000300215 INCENPQ9NQS7 918 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 MYO1BO43795 1136 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
EPB42-201ENST00000300215 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 FAM107BQ9H098 131 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 STX1AQ16623 288 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
EPB42-201ENST00000300215 RNF41Q9H4P4 317 aaPredicted RBP13.12□□□□□ -0.31
EPB42-201ENST00000300215 A0A1W2PP64 1363 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
EPB42-201ENST00000300215 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 NEMFO60524 1076 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
EPB42-201ENST00000300215 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
EPB42-201ENST00000300215 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 TMEM266Q2M3C6 531 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 MEIS3Q99687 375 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
EPB42-201ENST00000300215 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
EPB42-201ENST00000300215 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms