RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 USP16Q9Y5T5 823 aa13.59□□□□□ -0.23
TGFA-201ENST00000295400 MAP3K5Q99683 1374 aa13.59□□□□□ -0.23
TGFA-201ENST00000295400 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
TGFA-201ENST00000295400 LINS1Q8NG48 757 aa13.59□□□□□ -0.23
TGFA-201ENST00000295400 CTNNA3Q9UI47 895 aa13.59□□□□□ -0.23
TGFA-201ENST00000295400 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
TGFA-201ENST00000295400 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
TGFA-201ENST00000295400 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.23
TGFA-201ENST00000295400 GPT2Q8TD30 523 aa13.58□□□□□ -0.23
TGFA-201ENST00000295400 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.58□□□□□ -0.23
TGFA-201ENST00000295400 V9GYY5 206 aaPredicted RBP13.58□□□□□ -0.23
TGFA-201ENST00000295400 SGSM2O43147 1006 aa13.58□□□□□ -0.24
TGFA-201ENST00000295400 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 APOBRQ0VD83 1088 aa13.58□□□□□ -0.24
TGFA-201ENST00000295400 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 ZNF213O14771 459 aa13.58□□□□□ -0.24
TGFA-201ENST00000295400 IGSF3O75054 1194 aa13.58□□□□□ -0.24
TGFA-201ENST00000295400 SNRPA1P09661 255 aaKnown RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 SLC4A8Q2Y0W8 1093 aa13.58□□□□□ -0.24
TGFA-201ENST00000295400 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
TGFA-201ENST00000295400 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
TGFA-201ENST00000295400 PTPN14Q15678 1187 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 GOLGA6L1Q8N7Z2 621 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 RAI14Q9P0K7 980 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 RXRAP19793 462 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 PTGS1P23219 599 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 TRIM22Q8IYM9 498 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 JMYQ8N9B5 988 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 NOC3LQ8WTT2 800 aaKnown RBP13.57□□□□□ -0.24
TGFA-201ENST00000295400 SYNMO15061 1565 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 ZMYND15Q9H091 742 aa13.57□□□□□ -0.24
TGFA-201ENST00000295400 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
TGFA-201ENST00000295400 PTH1RQ03431 593 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 TRPM1Q7Z4N2 1603 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 TRPM2O94759 1503 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 OFD1O75665 1012 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 SUCLG2Q96I99 432 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 DDX19AQ9NUU7 478 aaKnown RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 NSFL1CQ9UNZ2 370 aaKnown RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 RNMTO43148 476 aaKnown RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 PHF23Q9BUL5 403 aaPredicted RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 NCOA5Q9HCD5 579 aaKnown RBP13.56□□□□□ -0.24
TGFA-201ENST00000295400 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
TGFA-201ENST00000295400 ALDH1L1O75891 902 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 IPO7O95373 1038 aaKnown RBP13.55□□□□□ -0.24
TGFA-201ENST00000295400 TYRO3Q06418 890 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 RUFY3Q7L099 469 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 DBNDD2Q9BQY9 259 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 CCDC171Q6TFL3 1326 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 KLF18A0A0U1RQI7 1052 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 FSD2A1L4K1 749 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 OTUD7BQ6GQQ9 843 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 HELBQ8NG08 1087 aaPredicted RBP13.55□□□□□ -0.24
TGFA-201ENST00000295400 ANO10Q9NW15 660 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
TGFA-201ENST00000295400 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
TGFA-201ENST00000295400 CPLX3Q8WVH0 158 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 MYO5CQ9NQX4 1742 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 XBP1P17861 261 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 TMC6Q7Z403 805 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
TGFA-201ENST00000295400 ERICH4A6NGS2 130 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 ZNF853P0CG23 659 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 ZNF594Q96JF6 807 aaPredicted RBP13.54□□□□□ -0.24
TGFA-201ENST00000295400 NOL10Q9BSC4 688 aaKnown RBP13.54□□□□□ -0.24
TGFA-201ENST00000295400 NAPBQ9H115 298 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 JAK2O60674 1132 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 ZNF445P59923 1031 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 FAM200AQ8TCP9 573 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 IP6K1Q92551 441 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
TGFA-201ENST00000295400 BRD1O95696 1058 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 NAP1L1P55209 391 aaKnown RBP13.54□□□□□ -0.24
TGFA-201ENST00000295400 MCMDC2Q4G0Z9 681 aa13.54□□□□□ -0.24
TGFA-201ENST00000295400 PROSER3Q2NL68 480 aa13.53□□□□□ -0.24
TGFA-201ENST00000295400 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
TGFA-201ENST00000295400 EIF4A1P60842 406 aaKnown RBP13.53□□□□□ -0.24
TGFA-201ENST00000295400 PREX2Q70Z35 1606 aa13.53□□□□□ -0.24
TGFA-201ENST00000295400 IFIT3O14879 490 aaKnown RBP13.53□□□□□ -0.24
TGFA-201ENST00000295400 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
TGFA-201ENST00000295400 BRMS1Q9HCU9 246 aa13.53□□□□□ -0.24
TGFA-201ENST00000295400 TTC41PQ6P2S7 1318 aa13.53□□□□□ -0.24
TGFA-201ENST00000295400 SLC27A2O14975 620 aa13.53□□□□□ -0.24
TGFA-201ENST00000295400 HSPA4P34932 840 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms