RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CDC37L1Q7L3B6 337 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 ERC1Q8IUD2 1116 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 BICD2Q8TD16 824 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 ECHDC1Q9NTX5 307 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 N4BP2Q86UW6 1770 aaPredicted RBP14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 IGSF3O75054 1194 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 NECAB1Q8N987 351 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 ZNF592Q92610 1267 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 KCND1Q9NSA2 647 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 TPCN1Q9ULQ1 816 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 TECPR2O15040 1411 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 SETD1AO15047 1707 aaKnown RBP14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 NCKAP5LQ9HCH0 1330 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 PLEKHG3A1L390 1219 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 ST3GAL1Q11201 340 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 DHX8Q14562 1220 aaKnown RBP14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 TAF7Q15545 349 aaPredicted RBP14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 CREB3L3Q68CJ9 461 aa14.61□□□□□ -0.07
CHMP2B-201ENST00000263780 BLOC1S2Q6QNY1 142 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 FERMT3Q86UX7 667 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 DNAJC25Q9H1X3 360 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 CFAP45Q9UL16 551 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 FLT4P35916 1363 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 TUBB4AP04350 444 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 NECTIN2Q92692 538 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 MAP4K1Q92918 833 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 RBM8AQ9Y5S9 174 aaKnown RBP14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
CHMP2B-201ENST00000263780 FAM208AQ9UK61 1670 aaKnown RBP14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 HDGFL1Q5TGJ6 251 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 NYAP1Q6ZVC0 841 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 ZSCAN16Q9H4T2 348 aaPredicted RBP14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 FAM53CQ9NYF3 392 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 CALCOCO1Q9P1Z2 691 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 IGSF1Q8N6C5 1336 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 CRYBG1Q9Y4K1 1723 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 SLU7O95391 586 aaKnown RBP14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 IFIT2P09913 472 aaKnown RBP14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 SKILP12757 684 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 GSDMDP57764 484 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 STX1AQ16623 288 aa14.59□□□□□ -0.07
CHMP2B-201ENST00000263780 ACEP12821 1306 aa14.58□□□□□ -0.07
CHMP2B-201ENST00000263780 PRR36Q9H6K5 1346 aa14.58□□□□□ -0.07
CHMP2B-201ENST00000263780 METP08581 1390 aa14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 TFIP11Q9UBB9 837 aaKnown RBP14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 BECN2A8MW95 431 aa14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 NR1I2O75469 434 aa14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 KMT5BQ4FZB7 885 aa14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 TIGD1Q96MW7 591 aa14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 SNRKQ9NRH2 765 aa14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 HMG20BQ9P0W2 317 aa14.58□□□□□ -0.08
CHMP2B-201ENST00000263780 CHD2O14647 1828 aaKnown RBP14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 MTX1Q13505 466 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 BMS1Q14692 1282 aaKnown RBP14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 CCDC144BQ3MJ40 725 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 CCDC144CPQ8IYA2 1237 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 BBXQ8WY36 941 aaPredicted RBP14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 ZNF215Q9UL58 517 aaPredicted RBP14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 USP6P35125 1406 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 SLC27A2O14975 620 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 RPS6KB1P23443 525 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 IQCB1Q15051 598 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 RICTORQ6R327 1708 aa14.57□□□□□ -0.08
CHMP2B-201ENST00000263780 AMPHP49418 695 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 KRT32Q14532 448 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 NAA30Q147X3 362 aaPredicted RBP14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 FAM173BQ6P4H8 233 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 LARP1Q6PKG0 1096 aaKnown RBP14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 EYA1Q99502 592 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 PEAK1Q9H792 1746 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 NRDCO43847 1150 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 HOXB7P09629 217 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 DNAAF4Q8WXU2 420 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 NAT10Q9H0A0 1025 aaKnown RBP14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 ANO10Q9NW15 660 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 IMPACTQ9P2X3 320 aa14.56□□□□□ -0.08
CHMP2B-201ENST00000263780 TSGA10IPQ3SY00 556 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 CCAR2Q8N163 923 aaKnown RBP14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 PGBD1Q96JS3 809 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 NALCNQ8IZF0 1738 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 CCDC69A6NI79 296 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 H3BQV1 296 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 CDK11BP21127 795 aaKnown RBP14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 BEND3Q5T5X7 828 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 IFFO2Q5TF58 517 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 ATL3Q6DD88 541 aa14.55□□□□□ -0.08
CHMP2B-201ENST00000263780 PHAXQ9H814 394 aaKnown RBP14.54□□□□□ -0.08
CHMP2B-201ENST00000263780 NBPF7P0C2Y1 421 aaPredicted RBP14.54□□□□□ -0.08
CHMP2B-201ENST00000263780 RESTQ13127 1097 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 FBXO38Q6PIJ6 1188 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 CCDC73Q6ZRK6 1079 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 TMEM51Q9NW97 253 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 ELF2Q15723 593 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 CEP57L1Q8IYX8 460 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 IL17REQ8NFR9 667 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 TSPYL1Q9H0U9 437 aa14.53□□□□□ -0.08
CHMP2B-201ENST00000263780 KCNJ6P48051 423 aa14.52□□□□□ -0.08
CHMP2B-201ENST00000263780 CCZ1BP86790 482 aa14.52□□□□□ -0.08
CHMP2B-201ENST00000263780 CCZ1P86791 482 aaPredicted RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms